RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 LINC00846Q9NV44 126 aa-1.01□□□□□ -2.57
SMC4-223ENST00000493695 NRKQ7Z2Y5 1582 aa-1.01□□□□□ -2.57
SMC4-223ENST00000493695 FMN2Q9NZ56 1722 aa-1.01□□□□□ -2.57
SMC4-223ENST00000493695 FAM223BA6NKX1 122 aa-1.02□□□□□ -2.57
SMC4-223ENST00000493695 COL4A6Q14031 1691 aa-1.02□□□□□ -2.57
SMC4-223ENST00000493695 USMG5Q96IX5 58 aa-1.02□□□□□ -2.57
SMC4-223ENST00000493695 MANBALQ9NQG1 85 aa-1.02□□□□□ -2.57
SMC4-223ENST00000493695 PRO1854Q9UHT4 67 aa-1.02□□□□□ -2.57
SMC4-223ENST00000493695 SPHKAPQ2M3C7 1700 aa-1.03□□□□□ -2.57
SMC4-223ENST00000493695 MAPKBP1O60336 1514 aa-1.03□□□□□ -2.57
SMC4-223ENST00000493695 ARHGAP5Q13017 1502 aa-1.03□□□□□ -2.57
SMC4-223ENST00000493695 PLEKHH2Q8IVE3 1493 aa-1.03□□□□□ -2.57
SMC4-223ENST00000493695 SNAPC5O75971 98 aa-1.03□□□□□ -2.57
SMC4-223ENST00000493695 COX8AP10176 69 aa-1.03□□□□□ -2.57
SMC4-223ENST00000493695 EIF4G3O43432 1585 aaKnown RBP-1.04□□□□□ -2.58
SMC4-223ENST00000493695 A0A1B0GV90 55 aa-1.04□□□□□ -2.58
SMC4-223ENST00000493695 A0A1B0GWA3 101 aa-1.04□□□□□ -2.58
SMC4-223ENST00000493695 NAP1L6A6NFF2 107 aa-1.04□□□□□ -2.58
SMC4-223ENST00000493695 GNG4P50150 75 aa-1.04□□□□□ -2.58
SMC4-223ENST00000493695 FDCSPQ8NFU4 85 aa-1.04□□□□□ -2.58
SMC4-223ENST00000493695 PCNX1Q96RV3 2341 aa-1.04□□□□□ -2.58
SMC4-223ENST00000493695 CHD1O14646 1710 aa-1.05□□□□□ -2.58
SMC4-223ENST00000493695 H3BQ15 152 aa-1.05□□□□□ -2.58
SMC4-223ENST00000493695 CORTO00230 105 aa-1.05□□□□□ -2.58
SMC4-223ENST00000493695 SAA2P0DJI9 122 aaPredicted RBP-1.05□□□□□ -2.58
SMC4-223ENST00000493695 SPRR2AP35326 72 aa-1.05□□□□□ -2.58
SMC4-223ENST00000493695 NLRP1Q9C000 1473 aa-1.05□□□□□ -2.58
SMC4-223ENST00000493695 PAPPA2Q9BXP8 1791 aa-1.06□□□□□ -2.58
SMC4-223ENST00000493695 SYS1-DBNDD2H3BUS1 97 aa-1.06□□□□□ -2.58
SMC4-223ENST00000493695 TRAPPC2P0DI81 140 aa-1.06□□□□□ -2.58
SMC4-223ENST00000493695 TRAPPC2BP0DI82 140 aa-1.06□□□□□ -2.58
SMC4-223ENST00000493695 SFTA2Q6UW10 78 aa-1.06□□□□□ -2.58
SMC4-223ENST00000493695 PZPP20742 1482 aa-1.06□□□□□ -2.58
SMC4-223ENST00000493695 MARF1Q9Y4F3 1742 aaKnown RBP-1.06□□□□□ -2.58
SMC4-223ENST00000493695 TOPAZ1Q8N9V7 1692 aa-1.07□□□□□ -2.58
SMC4-223ENST00000493695 CC2D2AQ9P2K1 1620 aa-1.07□□□□□ -2.58
SMC4-223ENST00000493695 PPP3R1P63098 170 aa-1.07□□□□□ -2.58
SMC4-223ENST00000493695 KRTAP6-2Q3LI66 62 aa-1.07□□□□□ -2.58
SMC4-223ENST00000493695 SVBPQ8N300 66 aa-1.07□□□□□ -2.58
SMC4-223ENST00000493695 C12orf57Q99622 126 aa-1.08□□□□□ -2.58
SMC4-223ENST00000493695 NKTRP30414 1462 aaKnown RBP-1.08□□□□□ -2.58
SMC4-223ENST00000493695 REV3LO60673 3130 aa-1.08□□□□□ -2.58
SMC4-223ENST00000493695 SEC11AP67812 179 aa-1.1□□□□□ -2.59
SMC4-223ENST00000493695 APLNQ9ULZ1 77 aa-1.1□□□□□ -2.59
SMC4-223ENST00000493695 EDC4Q6P2E9 1401 aaKnown RBP-1.1□□□□□ -2.59
SMC4-223ENST00000493695 CCDC141Q6ZP82 1450 aa-1.11□□□□□ -2.59
SMC4-223ENST00000493695 CPSF4LA6NMK7 179 aaKnown RBP-1.11□□□□□ -2.59
SMC4-223ENST00000493695 C2orf88Q9BSF0 95 aa-1.11□□□□□ -2.59
SMC4-223ENST00000493695 MXRA5Q9NR99 2828 aa-1.11□□□□□ -2.59
SMC4-223ENST00000493695 CRYM-AS1A6NIL9 109 aa-1.12□□□□□ -2.59
SMC4-223ENST00000493695 KRTAP19-8Q3LI54 63 aa-1.12□□□□□ -2.59
SMC4-223ENST00000493695 KIAA1551Q9HCM1 1747 aa-1.12□□□□□ -2.59
SMC4-223ENST00000493695 PDCD11Q14690 1871 aaKnown RBP-1.13□□□□□ -2.59
SMC4-223ENST00000493695 A0A087WVE0 104 aa-1.13□□□□□ -2.59
SMC4-223ENST00000493695 NBPF19A0A087WUL8 3843 aa-1.14□□□□□ -2.59
SMC4-223ENST00000493695 SLIT1O75093 1534 aa-1.14□□□□□ -2.59
SMC4-223ENST00000493695 TARBP1Q13395 1621 aaKnown RBP-1.14□□□□□ -2.59
SMC4-223ENST00000493695 CGREF1Q99674 301 aa-1.14□□□□□ -2.59
SMC4-223ENST00000493695 CREBBPQ92793 2442 aa-1.14□□□□□ -2.59
SMC4-223ENST00000493695 ABCA3Q99758 1704 aa-1.15□□□□□ -2.59
SMC4-223ENST00000493695 PKD1P98161 4303 aa-1.15□□□□□ -2.59
SMC4-223ENST00000493695 A0A1B0GU69 56 aa-1.15□□□□□ -2.59
SMC4-223ENST00000493695 SPRR2EP22531 72 aa-1.15□□□□□ -2.59
SMC4-223ENST00000493695 KRTDAPP60985 99 aa-1.15□□□□□ -2.59
SMC4-223ENST00000493695 FAT1Q14517 4588 aa-1.15□□□□□ -2.59
SMC4-223ENST00000493695 ABCC5O15440 1437 aa-1.15□□□□□ -2.59
SMC4-223ENST00000493695 SHPRHQ149N8 1683 aa-1.16□□□□□ -2.59
SMC4-223ENST00000493695 DEFB135Q30KP9 77 aa-1.16□□□□□ -2.6
SMC4-223ENST00000493695 H1FX-AS1Q4G0G2 97 aa-1.16□□□□□ -2.6
SMC4-223ENST00000493695 TMEM203Q969S6 136 aa-1.16□□□□□ -2.6
SMC4-223ENST00000493695 LRRC37AA6NMS7 1700 aa-1.16□□□□□ -2.6
SMC4-223ENST00000493695 FAM135AQ9P2D6 1515 aa-1.16□□□□□ -2.6
SMC4-223ENST00000493695 PCLOQ9Y6V0 5065 aa-1.16□□□□□ -2.6
SMC4-223ENST00000493695 AKAP13Q12802 2813 aa-1.16□□□□□ -2.6
SMC4-223ENST00000493695 hADV29S1A0JD25 119 aa-1.17□□□□□ -2.6
SMC4-223ENST00000493695 TMEM262E9PQX1 116 aa-1.17□□□□□ -2.6
SMC4-223ENST00000493695 S100A1P23297 94 aa-1.17□□□□□ -2.6
SMC4-223ENST00000493695 SNCAP37840 140 aa-1.17□□□□□ -2.6
SMC4-223ENST00000493695 C6orf201Q7Z4U5 140 aa-1.17□□□□□ -2.6
SMC4-223ENST00000493695 CRIPTQ9P021 101 aa-1.17□□□□□ -2.6
SMC4-223ENST00000493695 DNAH6Q9C0G6 4158 aa-1.18□□□□□ -2.6
SMC4-223ENST00000493695 C7orf77A4D0Y5 90 aa-1.18□□□□□ -2.6
SMC4-223ENST00000493695 LINC00587B1AMM8 73 aa-1.18□□□□□ -2.6
SMC4-223ENST00000493695 FAT3Q8TDW7 4589 aa-1.18□□□□□ -2.6
SMC4-223ENST00000493695 HSD52Q0P140 79 aa-1.19□□□□□ -2.6
SMC4-223ENST00000493695 GNG8Q9UK08 70 aa-1.19□□□□□ -2.6
SMC4-223ENST00000493695 KNDC1Q76NI1 1749 aa-1.2□□□□□ -2.6
SMC4-223ENST00000493695 TRANK1O15050 2925 aa-1.2□□□□□ -2.6
SMC4-223ENST00000493695 H3BQF6 201 aa-1.2□□□□□ -2.6
SMC4-223ENST00000493695 MRPS10P82664 201 aaKnown RBP-1.2□□□□□ -2.6
SMC4-223ENST00000493695 ZFYVE16Q7Z3T8 1539 aa-1.2□□□□□ -2.6
SMC4-223ENST00000493695 A0A0G2JND7 137 aa-1.21□□□□□ -2.6
SMC4-223ENST00000493695 H0Y9P7 68 aa-1.21□□□□□ -2.6
SMC4-223ENST00000493695 I3L3M4 83 aa-1.21□□□□□ -2.6
SMC4-223ENST00000493695 C9orf62Q8N4C0 152 aa-1.21□□□□□ -2.6
SMC4-223ENST00000493695 CACFD1Q9UGQ2 172 aa-1.21□□□□□ -2.6
SMC4-223ENST00000493695 PRDM15P57071 1507 aaPredicted RBP-1.21□□□□□ -2.6
SMC4-223ENST00000493695 TRBV25-1A0A075B6N4 114 aa-1.22□□□□□ -2.6
SMC4-223ENST00000493695 PRRC2CQ9Y520 2896 aaKnown RBP-1.22□□□□□ -2.61
SMC4-223ENST00000493695 NCOA3Q9Y6Q9 1424 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms