RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 Q8IZM0 81 aa8.91□□□□□ -0.98
CCM2-217ENST00000492883 SPACA4Q8TDM5 124 aa8.91□□□□□ -0.98
CCM2-217ENST00000492883 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
CCM2-217ENST00000492883 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.98
CCM2-217ENST00000492883 SPINK8P0C7L1 97 aa8.9□□□□□ -0.98
CCM2-217ENST00000492883 CIRBPQ14011 172 aaKnown RBP8.9□□□□□ -0.98
CCM2-217ENST00000492883 HSPB8Q9UJY1 196 aa8.9□□□□□ -0.98
CCM2-217ENST00000492883 A0A087WYN8 130 aa8.89□□□□□ -0.99
CCM2-217ENST00000492883 TRAV12-1A0A0B4J245 112 aa8.89□□□□□ -0.99
CCM2-217ENST00000492883 FABP4P15090 132 aa8.89□□□□□ -0.99
CCM2-217ENST00000492883 RPL18AQ02543 176 aaKnown RBP8.89□□□□□ -0.99
CCM2-217ENST00000492883 Q5VSD8 79 aa8.89□□□□□ -0.99
CCM2-217ENST00000492883 KRTAP4-5Q9BYR2 181 aa8.89□□□□□ -0.99
CCM2-217ENST00000492883 C6orf48Q9UBA6 75 aa8.89□□□□□ -0.99
CCM2-217ENST00000492883 TRBV30A0A0K0K1B3 111 aa8.88□□□□□ -0.99
CCM2-217ENST00000492883 C11orf86A6NJI1 115 aa8.88□□□□□ -0.99
CCM2-217ENST00000492883 H0Y8G0 127 aa8.88□□□□□ -0.99
CCM2-217ENST00000492883 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
CCM2-217ENST00000492883 PTTG1IPP53801 180 aa8.88□□□□□ -0.99
CCM2-217ENST00000492883 TMEM170BQ5T4T1 132 aa8.88□□□□□ -0.99
CCM2-217ENST00000492883 LINC00528Q8N1L1 170 aa8.88□□□□□ -0.99
CCM2-217ENST00000492883 COX7B2Q8TF08 81 aa8.88□□□□□ -0.99
CCM2-217ENST00000492883 RYR1P21817 5038 aa8.87□□□□□ -0.99
CCM2-217ENST00000492883 APOBP04114 4563 aaKnown RBP8.87□□□□□ -0.99
CCM2-217ENST00000492883 STPG4Q8N801 248 aa8.87□□□□□ -0.99
CCM2-217ENST00000492883 HERC2O95714 4834 aa8.86□□□□□ -0.99
CCM2-217ENST00000492883 F8VRH5 84 aa8.86□□□□□ -0.99
CCM2-217ENST00000492883 CXCL5P42830 114 aa8.86□□□□□ -0.99
CCM2-217ENST00000492883 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
CCM2-217ENST00000492883 PLA2G1BP04054 148 aaKnown RBP8.85□□□□□ -0.99
CCM2-217ENST00000492883 TLX1NBP0CAT3 122 aa8.85□□□□□ -0.99
CCM2-217ENST00000492883 GAGE2EQ4V326 116 aa8.85□□□□□ -0.99
CCM2-217ENST00000492883 C9orf116Q5BN46 136 aaPredicted RBP8.85□□□□□ -0.99
CCM2-217ENST00000492883 GAGE2DQ9UEU5 116 aa8.85□□□□□ -0.99
CCM2-217ENST00000492883 HSPG2P98160 4391 aa8.85□□□□□ -0.99
CCM2-217ENST00000492883 Q6ZRP5 223 aa8.84□□□□□ -0.99
CCM2-217ENST00000492883 MAP1LC3CQ9BXW4 147 aa8.84□□□□□ -0.99
CCM2-217ENST00000492883 IGLV5-39A0A0G2JS06 123 aa8.83□□□□□ -1
CCM2-217ENST00000492883 NDUFC2-KCTD14E9PQ53 114 aa8.83□□□□□ -1
CCM2-217ENST00000492883 ODF1Q14990 250 aa8.83□□□□□ -1
CCM2-217ENST00000492883 DNAH8Q96JB1 4490 aa8.82□□□□□ -1
CCM2-217ENST00000492883 A0A1W2PNN7 141 aa8.81□□□□□ -1
CCM2-217ENST00000492883 COA6Q5JTJ3 125 aaKnown RBP8.81□□□□□ -1
CCM2-217ENST00000492883 C7orf33Q8WU49 177 aa8.81□□□□□ -1
CCM2-217ENST00000492883 TMEM223A0PJW6 202 aa8.8□□□□□ -1
CCM2-217ENST00000492883 RPL37AP61513 92 aaKnown RBP8.8□□□□□ -1
CCM2-217ENST00000492883 INAFM2P0DMQ5 153 aa8.79□□□□□ -1
CCM2-217ENST00000492883 PLNP26678 52 aa8.79□□□□□ -1
CCM2-217ENST00000492883 PMCHL2Q9BQD1 86 aa8.79□□□□□ -1
CCM2-217ENST00000492883 DPM2O94777 84 aa8.78□□□□□ -1
CCM2-217ENST00000492883 SYS1-DBNDD2H3BUS1 97 aa8.77□□□□□ -1.01
CCM2-217ENST00000492883 IGKCP01834 107 aa8.77□□□□□ -1.01
CCM2-217ENST00000492883 SFTA2Q6UW10 78 aa8.77□□□□□ -1.01
CCM2-217ENST00000492883 FAM168BA1KXE4 195 aa8.76□□□□□ -1.01
CCM2-217ENST00000492883 PFN2P35080 140 aa8.76□□□□□ -1.01
CCM2-217ENST00000492883 C9orf129Q5T035 196 aaKnown RBP8.76□□□□□ -1.01
CCM2-217ENST00000492883 ZNF625Q96I27 306 aaPredicted RBP8.76□□□□□ -1.01
CCM2-217ENST00000492883 XAGE1AQ9HD64 81 aa8.76□□□□□ -1.01
CCM2-217ENST00000492883 HERVK_113P61574 105 aa8.75□□□□□ -1.01
CCM2-217ENST00000492883 FAM19A5Q7Z5A7 132 aaPredicted RBP8.75□□□□□ -1.01
CCM2-217ENST00000492883 KRTDAPP60985 99 aa8.74□□□□□ -1.01
CCM2-217ENST00000492883 PET117Q6UWS5 81 aa8.74□□□□□ -1.01
CCM2-217ENST00000492883 S100A6P06703 90 aa8.73□□□□□ -1.01
CCM2-217ENST00000492883 C3orf79P0CE67 100 aa8.73□□□□□ -1.01
CCM2-217ENST00000492883 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
CCM2-217ENST00000492883 PHF5AQ7RTV0 110 aaKnown RBP8.73□□□□□ -1.01
CCM2-217ENST00000492883 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
CCM2-217ENST00000492883 LEPROTO15243 131 aa8.72□□□□□ -1.01
CCM2-217ENST00000492883 COX17Q14061 63 aa8.72□□□□□ -1.01
CCM2-217ENST00000492883 LINC01545Q5VT33 79 aa8.72□□□□□ -1.01
CCM2-217ENST00000492883 PLEKHB2Q96CS7 222 aa8.72□□□□□ -1.01
CCM2-217ENST00000492883 S100A2P29034 98 aa8.71□□□□□ -1.02
CCM2-217ENST00000492883 LINC00158P58513 81 aa8.71□□□□□ -1.02
CCM2-217ENST00000492883 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
CCM2-217ENST00000492883 FAT1Q14517 4588 aa8.7□□□□□ -1.02
CCM2-217ENST00000492883 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
CCM2-217ENST00000492883 M0QXV9 152 aa8.7□□□□□ -1.02
CCM2-217ENST00000492883 HERV-K104P63124 156 aa8.7□□□□□ -1.02
CCM2-217ENST00000492883 MEIG1Q5JSS6 88 aa8.7□□□□□ -1.02
CCM2-217ENST00000492883 SERTAD4-AS1Q5TG53 156 aa8.7□□□□□ -1.02
CCM2-217ENST00000492883 KRTAP7-1Q8IUC3 87 aa8.7□□□□□ -1.02
CCM2-217ENST00000492883 A0A0U1RRA0 63 aa8.69□□□□□ -1.02
CCM2-217ENST00000492883 C20orf202A1L168 122 aa8.69□□□□□ -1.02
CCM2-217ENST00000492883 J3QQQ9 107 aa8.69□□□□□ -1.02
CCM2-217ENST00000492883 LGALS3P17931 250 aaKnown RBP8.69□□□□□ -1.02
CCM2-217ENST00000492883 PRR3P79522 188 aaKnown RBP8.69□□□□□ -1.02
CCM2-217ENST00000492883 C22orf24Q9Y442 160 aa8.69□□□□□ -1.02
CCM2-217ENST00000492883 LINC00587B1AMM8 73 aa8.68□□□□□ -1.02
CCM2-217ENST00000492883 UBE2BP63146 152 aa8.68□□□□□ -1.02
CCM2-217ENST00000492883 HIST3H2BBQ8N257 126 aa8.68□□□□□ -1.02
CCM2-217ENST00000492883 SND1-IT1Q9HBX3 110 aa8.68□□□□□ -1.02
CCM2-217ENST00000492883 TSPEAR-AS2P59090 65 aa8.67□□□□□ -1.02
CCM2-217ENST00000492883 LBHQ53QV2 105 aaPredicted RBP8.67□□□□□ -1.02
CCM2-217ENST00000492883 E9PLD3 99 aa8.66□□□□□ -1.02
CCM2-217ENST00000492883 SMIM13P0DJ93 91 aa8.66□□□□□ -1.02
CCM2-217ENST00000492883 NMUP48645 174 aa8.66□□□□□ -1.02
CCM2-217ENST00000492883 HNRNPA3P51991 378 aaKnown RBP8.66□□□□□ -1.02
CCM2-217ENST00000492883 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
CCM2-217ENST00000492883 PLA2G2DQ9UNK4 145 aa8.66□□□□□ -1.02
CCM2-217ENST00000492883 SNRPEP62304 92 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms