RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 CST9LQ9H4G1 147 aa9.31□□□□□ -0.92
SS18L1-205ENST00000492466 CDKN2A-AS1Q9UH64 79 aa9.31□□□□□ -0.92
SS18L1-205ENST00000492466 TINCRA0A1B0GVN0 87 aa9.3□□□□□ -0.92
SS18L1-205ENST00000492466 C6orf226Q5I0X4 101 aa9.3□□□□□ -0.92
SS18L1-205ENST00000492466 FAM19A3Q7Z5A8 133 aa9.3□□□□□ -0.92
SS18L1-205ENST00000492466 MRPL35Q9NZE8 188 aaKnown RBP9.3□□□□□ -0.92
SS18L1-205ENST00000492466 A0A096LNJ9 63 aa9.29□□□□□ -0.92
SS18L1-205ENST00000492466 H3BRM9 83 aa9.29□□□□□ -0.92
SS18L1-205ENST00000492466 PTTG1IPP53801 180 aa9.29□□□□□ -0.92
SS18L1-205ENST00000492466 UNQ6190/PRO20217Q6UXQ8 127 aa9.29□□□□□ -0.92
SS18L1-205ENST00000492466 TNXBP22105 4242 aa9.29□□□□□ -0.92
SS18L1-205ENST00000492466 RNF151Q2KHN1 245 aa9.28□□□□□ -0.92
SS18L1-205ENST00000492466 C2orf82Q6UX34 121 aa9.28□□□□□ -0.92
SS18L1-205ENST00000492466 Q8IZM0 81 aa9.28□□□□□ -0.92
SS18L1-205ENST00000492466 PLAC8Q9NZF1 115 aa9.28□□□□□ -0.92
SS18L1-205ENST00000492466 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
SS18L1-205ENST00000492466 SPINK8P0C7L1 97 aa9.27□□□□□ -0.93
SS18L1-205ENST00000492466 PDZD11Q5EBL8 140 aa9.27□□□□□ -0.93
SS18L1-205ENST00000492466 C10orf25Q5T742 122 aa9.27□□□□□ -0.93
SS18L1-205ENST00000492466 C6orf48Q9UBA6 75 aa9.27□□□□□ -0.93
SS18L1-205ENST00000492466 SCO1O75880 301 aa9.26□□□□□ -0.93
SS18L1-205ENST00000492466 SMIM1B2RUZ4 78 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 MT1HL1P0DM35 61 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 CXCL5P42830 114 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 KIAA0087Q14695 138 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 GAGE2EQ4V326 116 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 COX7B2Q8TF08 81 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 GAGE2DQ9UEU5 116 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 LRP2P98164 4655 aa9.25□□□□□ -0.93
SS18L1-205ENST00000492466 COLCA2A8K830 154 aa9.24□□□□□ -0.93
SS18L1-205ENST00000492466 H0Y8G0 127 aa9.24□□□□□ -0.93
SS18L1-205ENST00000492466 IGLC3P0DOY3 106 aa9.24□□□□□ -0.93
SS18L1-205ENST00000492466 FAM19A2Q8N3H0 131 aa9.24□□□□□ -0.93
SS18L1-205ENST00000492466 IFI27L1Q96BM0 104 aa9.24□□□□□ -0.93
SS18L1-205ENST00000492466 IGLV5-45A0A087WSX0 123 aa9.23□□□□□ -0.93
SS18L1-205ENST00000492466 F8VRH5 84 aa9.23□□□□□ -0.93
SS18L1-205ENST00000492466 SERF1AO75920 110 aa9.23□□□□□ -0.93
SS18L1-205ENST00000492466 TMEM170BQ5T4T1 132 aa9.23□□□□□ -0.93
SS18L1-205ENST00000492466 CHTOPQ9Y3Y2 248 aaKnown RBP9.23□□□□□ -0.93
SS18L1-205ENST00000492466 PLA2G2DQ9UNK4 145 aa9.22□□□□□ -0.93
SS18L1-205ENST00000492466 NDUFC2-KCTD14E9PQ53 114 aa9.21□□□□□ -0.94
SS18L1-205ENST00000492466 TLX1NBP0CAT3 122 aa9.21□□□□□ -0.94
SS18L1-205ENST00000492466 ZNF22P17026 224 aaPredicted RBP9.21□□□□□ -0.94
SS18L1-205ENST00000492466 C9orf116Q5BN46 136 aaPredicted RBP9.21□□□□□ -0.94
SS18L1-205ENST00000492466 Q6ZRP5 223 aa9.21□□□□□ -0.94
SS18L1-205ENST00000492466 FAM19A5Q7Z5A7 132 aaPredicted RBP9.21□□□□□ -0.94
SS18L1-205ENST00000492466 LEPROTL1O95214 131 aa9.2□□□□□ -0.94
SS18L1-205ENST00000492466 C11orf86A6NJI1 115 aa9.19□□□□□ -0.94
SS18L1-205ENST00000492466 TRAV12-1A0A0B4J245 112 aa9.18□□□□□ -0.94
SS18L1-205ENST00000492466 FABP4P15090 132 aa9.18□□□□□ -0.94
SS18L1-205ENST00000492466 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
SS18L1-205ENST00000492466 A0A1W2PNN7 141 aa9.17□□□□□ -0.94
SS18L1-205ENST00000492466 RNF213Q63HN8 5207 aa9.16□□□□□ -0.94
SS18L1-205ENST00000492466 FAM168BA1KXE4 195 aa9.16□□□□□ -0.94
SS18L1-205ENST00000492466 M0QXV9 152 aa9.16□□□□□ -0.94
SS18L1-205ENST00000492466 PRR3P79522 188 aaKnown RBP9.16□□□□□ -0.94
SS18L1-205ENST00000492466 LINC00310P59036 64 aa9.15□□□□□ -0.94
SS18L1-205ENST00000492466 UBE2BP63146 152 aa9.15□□□□□ -0.94
SS18L1-205ENST00000492466 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
SS18L1-205ENST00000492466 XAGE1AQ9HD64 81 aa9.15□□□□□ -0.94
SS18L1-205ENST00000492466 IGLV5-39A0A0G2JS06 123 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BKO60814 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BJP06899 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BOP23527 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BBP33778 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BDP58876 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BCP62807 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST2H2BEQ16778 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BHQ93079 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BNQ99877 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 HIST1H2BMQ99879 126 aa9.14□□□□□ -0.95
SS18L1-205ENST00000492466 SFTA2Q6UW10 78 aa9.13□□□□□ -0.95
SS18L1-205ENST00000492466 NUPR1O60356 82 aa9.12□□□□□ -0.95
SS18L1-205ENST00000492466 S100A1P23297 94 aa9.12□□□□□ -0.95
SS18L1-205ENST00000492466 PFN2P35080 140 aa9.12□□□□□ -0.95
SS18L1-205ENST00000492466 C9orf129Q5T035 196 aaKnown RBP9.12□□□□□ -0.95
SS18L1-205ENST00000492466 MAP1LC3CQ9BXW4 147 aa9.12□□□□□ -0.95
SS18L1-205ENST00000492466 PLNP26678 52 aa9.11□□□□□ -0.95
SS18L1-205ENST00000492466 ODF1Q14990 250 aa9.11□□□□□ -0.95
SS18L1-205ENST00000492466 ZNF625Q96I27 306 aaPredicted RBP9.11□□□□□ -0.95
SS18L1-205ENST00000492466 TMEM223A0PJW6 202 aa9.1□□□□□ -0.95
SS18L1-205ENST00000492466 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
SS18L1-205ENST00000492466 HERVK_113P61574 105 aa9.1□□□□□ -0.95
SS18L1-205ENST00000492466 ERG28Q9UKR5 140 aa9.1□□□□□ -0.95
SS18L1-205ENST00000492466 DPM2O94777 84 aa9.09□□□□□ -0.95
SS18L1-205ENST00000492466 C1orf137Q5JT78 98 aa9.09□□□□□ -0.95
SS18L1-205ENST00000492466 PMCHL2Q9BQD1 86 aa9.09□□□□□ -0.95
SS18L1-205ENST00000492466 NKAPP1Q8N9T2 125 aa9.08□□□□□ -0.96
SS18L1-205ENST00000492466 PSORS1C2Q9UIG4 136 aa9.08□□□□□ -0.96
SS18L1-205ENST00000492466 IGKCP01834 107 aa9.07□□□□□ -0.96
SS18L1-205ENST00000492466 LBHQ53QV2 105 aaPredicted RBP9.07□□□□□ -0.96
SS18L1-205ENST00000492466 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
SS18L1-205ENST00000492466 LINC00158P58513 81 aa9.06□□□□□ -0.96
SS18L1-205ENST00000492466 LINC01600Q96MT4 127 aa9.06□□□□□ -0.96
SS18L1-205ENST00000492466 COX17Q14061 63 aa9.05□□□□□ -0.96
SS18L1-205ENST00000492466 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
SS18L1-205ENST00000492466 MRPL55Q7Z7F7 128 aaKnown RBP9.04□□□□□ -0.96
SS18L1-205ENST00000492466 PLEKHB2Q96CS7 222 aa9.04□□□□□ -0.96
SS18L1-205ENST00000492466 NDUFA12Q9UI09 145 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms