RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ODF1Q14990 250 aa7.14□□□□□ -1.27
TMEM39A-211ENST00000491685 CHAC1Q9BUX1 264 aa7.14□□□□□ -1.27
TMEM39A-211ENST00000491685 PKIGQ9Y2B9 76 aa7.14□□□□□ -1.27
TMEM39A-211ENST00000491685 PKHD1L1Q86WI1 4243 aa7.14□□□□□ -1.27
TMEM39A-211ENST00000491685 FAT3Q8TDW7 4589 aa7.13□□□□□ -1.27
TMEM39A-211ENST00000491685 A0A087WZ39 114 aa7.13□□□□□ -1.27
TMEM39A-211ENST00000491685 A0A0J9YXV3 536 aa7.13□□□□□ -1.27
TMEM39A-211ENST00000491685 DPM2O94777 84 aa7.13□□□□□ -1.27
TMEM39A-211ENST00000491685 PRSS2P07478 247 aa7.13□□□□□ -1.27
TMEM39A-211ENST00000491685 IGLC3P0DOY3 106 aa7.13□□□□□ -1.27
TMEM39A-211ENST00000491685 COX6A2Q02221 97 aa7.13□□□□□ -1.27
TMEM39A-211ENST00000491685 ZC2HC1BQ5TFG8 222 aa7.13□□□□□ -1.27
TMEM39A-211ENST00000491685 CIRBP-AS1Q8TBR5 109 aa7.13□□□□□ -1.27
TMEM39A-211ENST00000491685 CHTOPQ9Y3Y2 248 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-211ENST00000491685 IGHV3-64A0A075B6Q5 118 aa7.12□□□□□ -1.27
TMEM39A-211ENST00000491685 IGLV5-45A0A087WSX0 123 aa7.12□□□□□ -1.27
TMEM39A-211ENST00000491685 IGKCP01834 107 aa7.12□□□□□ -1.27
TMEM39A-211ENST00000491685 C6orf226Q5I0X4 101 aa7.12□□□□□ -1.27
TMEM39A-211ENST00000491685 LINC00173Q6ZV60 143 aa7.12□□□□□ -1.27
TMEM39A-211ENST00000491685 LINC00469Q8N7U9 141 aa7.12□□□□□ -1.27
TMEM39A-211ENST00000491685 GVQW2A0A096LPI5 108 aaPredicted RBP7.11□□□□□ -1.27
TMEM39A-211ENST00000491685 HSBP1L1C9JCN9 74 aa7.11□□□□□ -1.27
TMEM39A-211ENST00000491685 SCGB1D1O95968 90 aa7.11□□□□□ -1.27
TMEM39A-211ENST00000491685 HIGD2BQ4VC39 106 aa7.11□□□□□ -1.27
TMEM39A-211ENST00000491685 SFTA2Q6UW10 78 aa7.11□□□□□ -1.27
TMEM39A-211ENST00000491685 ORAOV1Q8WV07 137 aa7.11□□□□□ -1.27
TMEM39A-211ENST00000491685 C11orf86A6NJI1 115 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 HERVK_113P61574 105 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 CNBPP62633 177 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 S100A12P80511 92 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 SYCNQ0VAF6 134 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 TMEM170BQ5T4T1 132 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 C15orf56Q8N910 161 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 C9orf163Q8N9P6 203 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 DPH3Q96FX2 82 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 C2orf48Q96LS8 159 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 CAMK2N2Q96S95 79 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 CDKN2A-AS1Q9UH64 79 aa7.1□□□□□ -1.27
TMEM39A-211ENST00000491685 IGLV4-69A0A075B6H9 119 aa7.09□□□□□ -1.27
TMEM39A-211ENST00000491685 H0Y8G0 127 aa7.09□□□□□ -1.27
TMEM39A-211ENST00000491685 CKS1BP61024 79 aa7.09□□□□□ -1.27
TMEM39A-211ENST00000491685 SPAG11BQ08648 103 aa7.09□□□□□ -1.27
TMEM39A-211ENST00000491685 PYY3Q5JQD4 70 aa7.09□□□□□ -1.27
TMEM39A-211ENST00000491685 MRPL35Q9NZE8 188 aaKnown RBP7.09□□□□□ -1.27
TMEM39A-211ENST00000491685 TOMM7Q9P0U1 55 aa7.09□□□□□ -1.27
TMEM39A-211ENST00000491685 PANO1I0J062 215 aa7.08□□□□□ -1.28
TMEM39A-211ENST00000491685 NDUFA1O15239 70 aa7.08□□□□□ -1.28
TMEM39A-211ENST00000491685 HNRNPA3P51991 378 aaKnown RBP7.08□□□□□ -1.28
TMEM39A-211ENST00000491685 PLA2G2DQ9UNK4 145 aa7.08□□□□□ -1.28
TMEM39A-211ENST00000491685 OXTP01178 125 aa7.07□□□□□ -1.28
TMEM39A-211ENST00000491685 CARD19Q96LW7 228 aa7.07□□□□□ -1.28
TMEM39A-211ENST00000491685 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-211ENST00000491685 CXCL5P42830 114 aa7.06□□□□□ -1.28
TMEM39A-211ENST00000491685 RNF151Q2KHN1 245 aa7.06□□□□□ -1.28
TMEM39A-211ENST00000491685 Q8IZM0 81 aa7.06□□□□□ -1.28
TMEM39A-211ENST00000491685 VAMP8Q9BV40 100 aa7.06□□□□□ -1.28
TMEM39A-211ENST00000491685 LINC00474Q9P2X8 69 aa7.06□□□□□ -1.28
TMEM39A-211ENST00000491685 E9PLD3 99 aa7.05□□□□□ -1.28
TMEM39A-211ENST00000491685 NMUP48645 174 aa7.05□□□□□ -1.28
TMEM39A-211ENST00000491685 RPL37AP61513 92 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-211ENST00000491685 COX7B2Q8TF08 81 aa7.05□□□□□ -1.28
TMEM39A-211ENST00000491685 PLEKHB2Q96CS7 222 aa7.05□□□□□ -1.28
TMEM39A-211ENST00000491685 LINC00526Q96FQ7 95 aa7.05□□□□□ -1.28
TMEM39A-211ENST00000491685 TMEM223A0PJW6 202 aa7.04□□□□□ -1.28
TMEM39A-211ENST00000491685 SLPIP03973 132 aa7.04□□□□□ -1.28
TMEM39A-211ENST00000491685 SPINK8P0C7L1 97 aa7.04□□□□□ -1.28
TMEM39A-211ENST00000491685 ZNF22P17026 224 aaPredicted RBP7.04□□□□□ -1.28
TMEM39A-211ENST00000491685 SDIM1Q6ZPB5 146 aa7.04□□□□□ -1.28
TMEM39A-211ENST00000491685 PMCHL2Q9BQD1 86 aa7.04□□□□□ -1.28
TMEM39A-211ENST00000491685 IGLV5-39A0A0G2JS06 123 aa7.03□□□□□ -1.28
TMEM39A-211ENST00000491685 TRBV30A0A0K0K1B3 111 aa7.03□□□□□ -1.28
TMEM39A-211ENST00000491685 LOC107984640A0A0U1RRK4 108 aa7.03□□□□□ -1.28
TMEM39A-211ENST00000491685 LINC00587B1AMM8 73 aa7.03□□□□□ -1.28
TMEM39A-211ENST00000491685 SMIM1B2RUZ4 78 aa7.03□□□□□ -1.28
TMEM39A-211ENST00000491685 DLEU1O43261 78 aa7.03□□□□□ -1.28
TMEM39A-211ENST00000491685 KIAA0087Q14695 138 aa7.03□□□□□ -1.28
TMEM39A-211ENST00000491685 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
TMEM39A-211ENST00000491685 Q6ZRU5 148 aa7.03□□□□□ -1.28
TMEM39A-211ENST00000491685 LINC00518Q8N0U6 118 aa7.03□□□□□ -1.28
TMEM39A-211ENST00000491685 LEPROTO15243 131 aa7.02□□□□□ -1.29
TMEM39A-211ENST00000491685 BOD1L2Q8IYS8 172 aa7.02□□□□□ -1.29
TMEM39A-211ENST00000491685 RNF213Q63HN8 5207 aa7.02□□□□□ -1.29
TMEM39A-211ENST00000491685 C12orf57Q99622 126 aa7.01□□□□□ -1.29
TMEM39A-211ENST00000491685 CHTF8P0CG12 524 aa7□□□□□ -1.29
TMEM39A-211ENST00000491685 HERV-K104P63124 156 aa7□□□□□ -1.29
TMEM39A-211ENST00000491685 GAGE2BQ13066 116 aa7□□□□□ -1.29
TMEM39A-211ENST00000491685 C7orf33Q8WU49 177 aa7□□□□□ -1.29
TMEM39A-211ENST00000491685 TLX1NBP0CAT3 122 aa6.99□□□□□ -1.29
TMEM39A-211ENST00000491685 C2orf82Q6UX34 121 aa6.99□□□□□ -1.29
TMEM39A-211ENST00000491685 TSTD3H0UI37 97 aa6.98□□□□□ -1.29
TMEM39A-211ENST00000491685 J3QQQ9 107 aa6.98□□□□□ -1.29
TMEM39A-211ENST00000491685 COX8AP10176 69 aa6.98□□□□□ -1.29
TMEM39A-211ENST00000491685 LGALS3P17931 250 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-211ENST00000491685 RPL18AQ02543 176 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-211ENST00000491685 CIRBPQ14011 172 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-211ENST00000491685 MAJINQ3KP22 176 aa6.98□□□□□ -1.29
TMEM39A-211ENST00000491685 SPATA45Q537H7 98 aa6.98□□□□□ -1.29
TMEM39A-211ENST00000491685 C10orf25Q5T742 122 aa6.98□□□□□ -1.29
TMEM39A-211ENST00000491685 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
TMEM39A-211ENST00000491685 C6orf48Q9UBA6 75 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms