RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 C1orf137Q5JT78 98 aa10.28□□□□□ -0.76
PDLIM2-217ENST00000491330 Q8IZM0 81 aa10.28□□□□□ -0.76
PDLIM2-217ENST00000491330 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
PDLIM2-217ENST00000491330 NDUFC2-KCTD14E9PQ53 114 aa10.27□□□□□ -0.77
PDLIM2-217ENST00000491330 CXCL5P42830 114 aa10.27□□□□□ -0.77
PDLIM2-217ENST00000491330 C18orf32Q8TCD1 76 aa10.27□□□□□ -0.77
PDLIM2-217ENST00000491330 C6orf48Q9UBA6 75 aa10.27□□□□□ -0.77
PDLIM2-217ENST00000491330 MT1HL1P0DM35 61 aa10.26□□□□□ -0.77
PDLIM2-217ENST00000491330 PMVKQ15126 192 aa10.26□□□□□ -0.77
PDLIM2-217ENST00000491330 PHF5AQ7RTV0 110 aaKnown RBP10.26□□□□□ -0.77
PDLIM2-217ENST00000491330 FAM19A5Q7Z5A7 132 aaPredicted RBP10.26□□□□□ -0.77
PDLIM2-217ENST00000491330 PSORS1C2Q9UIG4 136 aa10.26□□□□□ -0.77
PDLIM2-217ENST00000491330 IGLV5-45A0A087WSX0 123 aa10.25□□□□□ -0.77
PDLIM2-217ENST00000491330 HBDP02042 147 aa10.25□□□□□ -0.77
PDLIM2-217ENST00000491330 SRSF9Q13242 221 aaKnown RBP eCLIP10.25□□□□□ -0.77
PDLIM2-217ENST00000491330 C10orf25Q5T742 122 aa10.25□□□□□ -0.77
PDLIM2-217ENST00000491330 DIRC1Q969H9 104 aa10.25□□□□□ -0.77
PDLIM2-217ENST00000491330 ODF1Q14990 250 aa10.24□□□□□ -0.77
PDLIM2-217ENST00000491330 YPEL4Q96NS1 127 aa10.24□□□□□ -0.77
PDLIM2-217ENST00000491330 CST9LQ9H4G1 147 aa10.24□□□□□ -0.77
PDLIM2-217ENST00000491330 ATP5LO75964 103 aa10.23□□□□□ -0.77
PDLIM2-217ENST00000491330 PDZD11Q5EBL8 140 aa10.23□□□□□ -0.77
PDLIM2-217ENST00000491330 C2orf82Q6UX34 121 aa10.23□□□□□ -0.77
PDLIM2-217ENST00000491330 CDKN2A-AS1Q9UH64 79 aa10.23□□□□□ -0.77
PDLIM2-217ENST00000491330 H3BRM9 83 aa10.22□□□□□ -0.77
PDLIM2-217ENST00000491330 M0QXV9 152 aa10.22□□□□□ -0.77
PDLIM2-217ENST00000491330 LBHQ53QV2 105 aaPredicted RBP10.22□□□□□ -0.77
PDLIM2-217ENST00000491330 LINC00469Q8N7U9 141 aa10.22□□□□□ -0.77
PDLIM2-217ENST00000491330 CHCHD1Q96BP2 118 aaKnown RBP10.22□□□□□ -0.77
PDLIM2-217ENST00000491330 F8VRH5 84 aa10.21□□□□□ -0.77
PDLIM2-217ENST00000491330 ZC2HC1BQ5TFG8 222 aa10.21□□□□□ -0.77
PDLIM2-217ENST00000491330 IGLV7-43P04211 117 aa10.2□□□□□ -0.78
PDLIM2-217ENST00000491330 A0A096LNJ9 63 aa10.18□□□□□ -0.78
PDLIM2-217ENST00000491330 FAM168BA1KXE4 195 aa10.18□□□□□ -0.78
PDLIM2-217ENST00000491330 SMIM1B2RUZ4 78 aa10.18□□□□□ -0.78
PDLIM2-217ENST00000491330 IGLC3P0DOY3 106 aa10.18□□□□□ -0.78
PDLIM2-217ENST00000491330 SFTA2Q6UW10 78 aa10.18□□□□□ -0.78
PDLIM2-217ENST00000491330 URB1-AS1Q96HZ7 61 aa10.18□□□□□ -0.78
PDLIM2-217ENST00000491330 KRTAP10-8P60410 259 aa10.16□□□□□ -0.78
PDLIM2-217ENST00000491330 COX7B2Q8TF08 81 aa10.16□□□□□ -0.78
PDLIM2-217ENST00000491330 LRP1Q07954 4544 aaKnown RBP10.15□□□□□ -0.78
PDLIM2-217ENST00000491330 NUPR1O60356 82 aa10.14□□□□□ -0.79
PDLIM2-217ENST00000491330 NDUFA6P56556 154 aa10.14□□□□□ -0.79
PDLIM2-217ENST00000491330 CBLN2Q8IUK8 224 aa10.14□□□□□ -0.79
PDLIM2-217ENST00000491330 H0Y9J4 135 aa10.13□□□□□ -0.79
PDLIM2-217ENST00000491330 C9orf129Q5T035 196 aaKnown RBP10.13□□□□□ -0.79
PDLIM2-217ENST00000491330 TRAV12-1A0A0B4J245 112 aa10.12□□□□□ -0.79
PDLIM2-217ENST00000491330 HSBP1O75506 76 aa10.12□□□□□ -0.79
PDLIM2-217ENST00000491330 XAGE1AQ9HD64 81 aa10.12□□□□□ -0.79
PDLIM2-217ENST00000491330 PKHD1L1Q86WI1 4243 aa10.12□□□□□ -0.79
PDLIM2-217ENST00000491330 IGLV1-50A0A075B6I6 118 aa10.11□□□□□ -0.79
PDLIM2-217ENST00000491330 IGLV5-39A0A0G2JS06 123 aa10.11□□□□□ -0.79
PDLIM2-217ENST00000491330 BAGE3Q86Y29 109 aa10.11□□□□□ -0.79
PDLIM2-217ENST00000491330 SLC7A5P1Q8MH63 180 aa10.11□□□□□ -0.79
PDLIM2-217ENST00000491330 TP73-AS1Q9UF72 201 aa10.11□□□□□ -0.79
PDLIM2-217ENST00000491330 C22orf24Q9Y442 160 aa10.11□□□□□ -0.79
PDLIM2-217ENST00000491330 RPL13AP40429 203 aaKnown RBP10.1□□□□□ -0.79
PDLIM2-217ENST00000491330 IFI27L1Q96BM0 104 aa10.1□□□□□ -0.79
PDLIM2-217ENST00000491330 TRGC2P03986 189 aa10.09□□□□□ -0.79
PDLIM2-217ENST00000491330 SPINK8P0C7L1 97 aa10.09□□□□□ -0.79
PDLIM2-217ENST00000491330 ZNF22P17026 224 aaPredicted RBP10.09□□□□□ -0.79
PDLIM2-217ENST00000491330 COX17Q14061 63 aa10.09□□□□□ -0.79
PDLIM2-217ENST00000491330 PMCHL1Q16048 86 aa10.09□□□□□ -0.79
PDLIM2-217ENST00000491330 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
PDLIM2-217ENST00000491330 NKAPP1Q8N9T2 125 aa10.09□□□□□ -0.79
PDLIM2-217ENST00000491330 RPL28P46779 137 aaKnown RBP10.08□□□□□ -0.8
PDLIM2-217ENST00000491330 CHTOPQ9Y3Y2 248 aaKnown RBP10.08□□□□□ -0.8
PDLIM2-217ENST00000491330 FAT3Q8TDW7 4589 aa10.08□□□□□ -0.8
PDLIM2-217ENST00000491330 ZNF861PO60384 105 aa10.07□□□□□ -0.8
PDLIM2-217ENST00000491330 TMEM170BQ5T4T1 132 aa10.06□□□□□ -0.8
PDLIM2-217ENST00000491330 COLCA2A8K830 154 aa10.05□□□□□ -0.8
PDLIM2-217ENST00000491330 PRR26Q8N8Z3 221 aa10.05□□□□□ -0.8
PDLIM2-217ENST00000491330 C11orf86A6NJI1 115 aa10.04□□□□□ -0.8
PDLIM2-217ENST00000491330 LEPROTL1O95214 131 aa10.04□□□□□ -0.8
PDLIM2-217ENST00000491330 KRTAP7-1Q8IUC3 87 aa10.04□□□□□ -0.8
PDLIM2-217ENST00000491330 HSPB8Q9UJY1 196 aa10.04□□□□□ -0.8
PDLIM2-217ENST00000491330 RPL24P83731 157 aaKnown RBP10.03□□□□□ -0.8
PDLIM2-217ENST00000491330 KRTAP11-1Q8IUC1 163 aa10.03□□□□□ -0.8
PDLIM2-217ENST00000491330 BCE1O60756 84 aa10.02□□□□□ -0.81
PDLIM2-217ENST00000491330 PFN2P35080 140 aa10.02□□□□□ -0.81
PDLIM2-217ENST00000491330 IGLV5-37A0A075B6J1 123 aa10.01□□□□□ -0.81
PDLIM2-217ENST00000491330 LINC00587B1AMM8 73 aa10.01□□□□□ -0.81
PDLIM2-217ENST00000491330 SERF1AO75920 110 aa10.01□□□□□ -0.81
PDLIM2-217ENST00000491330 TMEM223A0PJW6 202 aa10□□□□□ -0.81
PDLIM2-217ENST00000491330 ATP6V1G1O75348 118 aa10□□□□□ -0.81
PDLIM2-217ENST00000491330 PLNP26678 52 aa10□□□□□ -0.81
PDLIM2-217ENST00000491330 UBE2AP49459 152 aa10□□□□□ -0.81
PDLIM2-217ENST00000491330 FAM19A2Q8N3H0 131 aa10□□□□□ -0.81
PDLIM2-217ENST00000491330 LINC00167Q96N53 147 aa10□□□□□ -0.81
PDLIM2-217ENST00000491330 ERG28Q9UKR5 140 aa10□□□□□ -0.81
PDLIM2-217ENST00000491330 GAGE10A6NGK3 116 aa9.99□□□□□ -0.81
PDLIM2-217ENST00000491330 RPL37AP8A6NKH3 93 aa9.99□□□□□ -0.81
PDLIM2-217ENST00000491330 HERV-K104P63124 156 aa9.98□□□□□ -0.81
PDLIM2-217ENST00000491330 ZNF625Q96I27 306 aaPredicted RBP9.98□□□□□ -0.81
PDLIM2-217ENST00000491330 HMCN2Q8NDA2 5059 aa9.97□□□□□ -0.81
PDLIM2-217ENST00000491330 CRYGAP11844 174 aa9.96□□□□□ -0.82
PDLIM2-217ENST00000491330 LINC00310P59036 64 aa9.96□□□□□ -0.82
PDLIM2-217ENST00000491330 LINC00158P58513 81 aa9.94□□□□□ -0.82
PDLIM2-217ENST00000491330 HERVK_113P61574 105 aa9.94□□□□□ -0.82
PDLIM2-217ENST00000491330 MAP1LC3CQ9BXW4 147 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms