RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TMUB2Q71RG4 321 aa3.75□□□□□ -1.81
PDLIM1-203ENST00000490391 SPRR4Q96PI1 79 aa3.75□□□□□ -1.81
PDLIM1-203ENST00000490391 ST20Q9HBF5 79 aa3.75□□□□□ -1.81
PDLIM1-203ENST00000490391 IGLV5-37A0A075B6J1 123 aa3.74□□□□□ -1.81
PDLIM1-203ENST00000490391 FAM240BA0A1B0GVZ2 78 aa3.74□□□□□ -1.81
PDLIM1-203ENST00000490391 XKRY2A2RUG3 117 aa3.74□□□□□ -1.81
PDLIM1-203ENST00000490391 SLC25A20O43772 301 aa3.74□□□□□ -1.81
PDLIM1-203ENST00000490391 SMAGPQ0VAQ4 97 aa3.74□□□□□ -1.81
PDLIM1-203ENST00000490391 IGKV2-28A0A075B6P5 120 aa3.73□□□□□ -1.81
PDLIM1-203ENST00000490391 IGKV2D-28P01615 120 aa3.73□□□□□ -1.81
PDLIM1-203ENST00000490391 MT1FP04733 61 aa3.73□□□□□ -1.81
PDLIM1-203ENST00000490391 CENPWQ5EE01 88 aa3.73□□□□□ -1.81
PDLIM1-203ENST00000490391 RPL7L1Q6DKI1 246 aaKnown RBP3.73□□□□□ -1.81
PDLIM1-203ENST00000490391 FAM19A1Q7Z5A9 133 aa3.73□□□□□ -1.81
PDLIM1-203ENST00000490391 LINC00846Q9NV44 126 aa3.73□□□□□ -1.81
PDLIM1-203ENST00000490391 TGIF2-C20orf24A0A0A6YYL0 155 aa3.72□□□□□ -1.81
PDLIM1-203ENST00000490391 SCO1O75880 301 aa3.72□□□□□ -1.81
PDLIM1-203ENST00000490391 PCP4P48539 62 aa3.72□□□□□ -1.81
PDLIM1-203ENST00000490391 CBLN2Q8IUK8 224 aa3.72□□□□□ -1.81
PDLIM1-203ENST00000490391 GNB1LQ9BYB4 327 aa3.72□□□□□ -1.81
PDLIM1-203ENST00000490391 TMEM126AQ9H061 195 aa3.72□□□□□ -1.81
PDLIM1-203ENST00000490391 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
PDLIM1-203ENST00000490391 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 TRBV20OR9-2A0A075B6H5 130 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 C9orf92A6NGG3 77 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 IFITM10A6NMD0 228 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 TMEM238C9JI98 176 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 M0R378 163 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 PFDN1O60925 122 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 FCER1GP30273 86 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 RPL39P62891 51 aaKnown RBP3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 MRPS36P82909 103 aaKnown RBP3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 AKR1C8PQ5T2L2 129 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 SMIM15Q7Z3B0 74 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 C11orf52Q96A22 123 aa3.71□□□□□ -1.82
PDLIM1-203ENST00000490391 VCYO14598 125 aa3.7□□□□□ -1.82
PDLIM1-203ENST00000490391 HBBP68871 147 aa3.7□□□□□ -1.82
PDLIM1-203ENST00000490391 LINC01561Q8N1V8 128 aa3.7□□□□□ -1.82
PDLIM1-203ENST00000490391 HIGD2AQ9BW72 106 aa3.7□□□□□ -1.82
PDLIM1-203ENST00000490391 PRYO14603 147 aa3.69□□□□□ -1.82
PDLIM1-203ENST00000490391 NRACQ8N912 160 aa3.69□□□□□ -1.82
PDLIM1-203ENST00000490391 SMIM12Q96EX1 92 aa3.69□□□□□ -1.82
PDLIM1-203ENST00000490391 A0A1B0GV50 99 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 F8VRH5 84 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 SMKR1H3BMG3 65 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 SSNA1O43805 119 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 RAB4AP20338 218 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 GNG4P50150 75 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 CKS1BP61024 79 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 Q8IZM0 81 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 NKAPP1Q8N9T2 125 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 MBD3L1Q8WWY6 194 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 TMEM18Q96B42 140 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 GEMIN7Q9H840 131 aaKnown RBP3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 SPANXA1Q9NS26 97 aa3.68□□□□□ -1.82
PDLIM1-203ENST00000490391 IGKV2D-30A0A075B6S6 120 aa3.67□□□□□ -1.82
PDLIM1-203ENST00000490391 BORCS7-ASMTA0A0B4J1R7 106 aa3.67□□□□□ -1.82
PDLIM1-203ENST00000490391 RPL37P61927 97 aaKnown RBP3.67□□□□□ -1.82
PDLIM1-203ENST00000490391 CCL20P78556 96 aa3.67□□□□□ -1.82
PDLIM1-203ENST00000490391 LINC00483Q53H64 154 aa3.67□□□□□ -1.82
PDLIM1-203ENST00000490391 C6orf226Q5I0X4 101 aa3.67□□□□□ -1.82
PDLIM1-203ENST00000490391 SFT2D1Q8WV19 159 aa3.67□□□□□ -1.82
PDLIM1-203ENST00000490391 TMEM191AQ9H0A3 160 aa3.67□□□□□ -1.82
PDLIM1-203ENST00000490391 TOMM7Q9P0U1 55 aa3.67□□□□□ -1.82
PDLIM1-203ENST00000490391 PRSS2P07478 247 aa3.66□□□□□ -1.82
PDLIM1-203ENST00000490391 MOBPQ13875 183 aa3.66□□□□□ -1.82
PDLIM1-203ENST00000490391 Q5BKY6 102 aa3.66□□□□□ -1.82
PDLIM1-203ENST00000490391 AMN1Q8IY45 258 aa3.66□□□□□ -1.82
PDLIM1-203ENST00000490391 KCNRGQ8N5I3 272 aa3.66□□□□□ -1.82
PDLIM1-203ENST00000490391 ENKURQ8TC29 256 aa3.66□□□□□ -1.82
PDLIM1-203ENST00000490391 ZNF706Q9Y5V0 76 aaPredicted RBP3.66□□□□□ -1.82
PDLIM1-203ENST00000490391 K7EN84 100 aa3.65□□□□□ -1.83
PDLIM1-203ENST00000490391 Q6Q795 121 aa3.65□□□□□ -1.83
PDLIM1-203ENST00000490391 Q6ZN92 141 aa3.65□□□□□ -1.83
PDLIM1-203ENST00000490391 SSBP3-AS1Q7Z2R9 100 aa3.65□□□□□ -1.83
PDLIM1-203ENST00000490391 ALKBH7Q9BT30 221 aaPredicted RBP3.65□□□□□ -1.83
PDLIM1-203ENST00000490391 IGLV4-3A0A075B6K6 122 aa3.64□□□□□ -1.83
PDLIM1-203ENST00000490391 IGLV6-57P01721 117 aa3.64□□□□□ -1.83
PDLIM1-203ENST00000490391 VPREB1P12018 145 aa3.64□□□□□ -1.83
PDLIM1-203ENST00000490391 LINC01551Q86U37 167 aa3.64□□□□□ -1.83
PDLIM1-203ENST00000490391 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
PDLIM1-203ENST00000490391 BIN3Q9NQY0 253 aa3.64□□□□□ -1.83
PDLIM1-203ENST00000490391 IGLV9-49A0A0B4J1Y8 123 aa3.63□□□□□ -1.83
PDLIM1-203ENST00000490391 PPP1R2P9O14990 202 aa3.63□□□□□ -1.83
PDLIM1-203ENST00000490391 PPP1R17O96001 155 aa3.63□□□□□ -1.83
PDLIM1-203ENST00000490391 MT3P25713 68 aa3.63□□□□□ -1.83
PDLIM1-203ENST00000490391 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
PDLIM1-203ENST00000490391 Q8NDZ9 215 aa3.63□□□□□ -1.83
PDLIM1-203ENST00000490391 FAM213BQ8TBF2 198 aa3.63□□□□□ -1.83
PDLIM1-203ENST00000490391 CXCL5P42830 114 aa3.62□□□□□ -1.83
PDLIM1-203ENST00000490391 ZC2HC1BQ5TFG8 222 aa3.62□□□□□ -1.83
PDLIM1-203ENST00000490391 FAM19A3Q7Z5A8 133 aa3.62□□□□□ -1.83
PDLIM1-203ENST00000490391 PYGO1Q9Y3Y4 419 aa3.62□□□□□ -1.83
PDLIM1-203ENST00000490391 TRBV24-1A0A075B6N3 115 aa3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 A0A1B0GUT8 65 aa3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 TCAPO15273 167 aa3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 IFI27P40305 119 aaPredicted RBP3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 IFITM3Q01628 133 aa3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 SMCR5Q8TEV8 140 aa3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 TMEM141Q96I45 108 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms