RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 TRAPPC1Q9Y5R8 145 aa11.06□□□□□ -0.64
ABCF3-217ENST00000489719 SNAPINO95295 136 aa11.05□□□□□ -0.64
ABCF3-217ENST00000489719 Q8IZM0 81 aa11.05□□□□□ -0.64
ABCF3-217ENST00000489719 NDUFC2-KCTD14E9PQ53 114 aa11.04□□□□□ -0.64
ABCF3-217ENST00000489719 SVBPQ8N300 66 aa11.04□□□□□ -0.64
ABCF3-217ENST00000489719 LINC00469Q8N7U9 141 aa11.04□□□□□ -0.64
ABCF3-217ENST00000489719 TINCRA0A1B0GVN0 87 aa11.03□□□□□ -0.64
ABCF3-217ENST00000489719 SRSF9Q13242 221 aaKnown RBP eCLIP11.03□□□□□ -0.64
ABCF3-217ENST00000489719 REG3GQ6UW15 175 aa11.03□□□□□ -0.64
ABCF3-217ENST00000489719 CST9LQ9H4G1 147 aa11.03□□□□□ -0.64
ABCF3-217ENST00000489719 PSORS1C2Q9UIG4 136 aa11.03□□□□□ -0.64
ABCF3-217ENST00000489719 FAM168BA1KXE4 195 aa11.02□□□□□ -0.65
ABCF3-217ENST00000489719 MT1HL1P0DM35 61 aa11.02□□□□□ -0.65
ABCF3-217ENST00000489719 PMVKQ15126 192 aa11.02□□□□□ -0.65
ABCF3-217ENST00000489719 FAM19A5Q7Z5A7 132 aaPredicted RBP11.02□□□□□ -0.65
ABCF3-217ENST00000489719 LINC00614P0C842 121 aa11.01□□□□□ -0.65
ABCF3-217ENST00000489719 C1orf137Q5JT78 98 aa11.01□□□□□ -0.65
ABCF3-217ENST00000489719 LINC01600Q96MT4 127 aa11.01□□□□□ -0.65
ABCF3-217ENST00000489719 F8VRH5 84 aa10.99□□□□□ -0.65
ABCF3-217ENST00000489719 PDZD11Q5EBL8 140 aa10.99□□□□□ -0.65
ABCF3-217ENST00000489719 CXCL5P42830 114 aa10.98□□□□□ -0.65
ABCF3-217ENST00000489719 NDUFA6P56556 154 aa10.98□□□□□ -0.65
ABCF3-217ENST00000489719 RAB5BP61020 215 aa10.98□□□□□ -0.65
ABCF3-217ENST00000489719 C18orf32Q8TCD1 76 aa10.98□□□□□ -0.65
ABCF3-217ENST00000489719 UBE2BP63146 152 aa10.97□□□□□ -0.65
ABCF3-217ENST00000489719 C9orf129Q5T035 196 aaKnown RBP10.97□□□□□ -0.65
ABCF3-217ENST00000489719 COX7B2Q8TF08 81 aa10.97□□□□□ -0.65
ABCF3-217ENST00000489719 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
ABCF3-217ENST00000489719 IGLV5-45A0A087WSX0 123 aa10.96□□□□□ -0.65
ABCF3-217ENST00000489719 SMIM1B2RUZ4 78 aa10.96□□□□□ -0.65
ABCF3-217ENST00000489719 H3BRM9 83 aa10.96□□□□□ -0.65
ABCF3-217ENST00000489719 M0QXV9 152 aa10.96□□□□□ -0.65
ABCF3-217ENST00000489719 HBDP02042 147 aa10.95□□□□□ -0.66
ABCF3-217ENST00000489719 SPINK8P0C7L1 97 aa10.94□□□□□ -0.66
ABCF3-217ENST00000489719 KRTAP7-1Q8IUC3 87 aa10.94□□□□□ -0.66
ABCF3-217ENST00000489719 URB1-AS1Q96HZ7 61 aa10.94□□□□□ -0.66
ABCF3-217ENST00000489719 IGLV7-43P04211 117 aa10.93□□□□□ -0.66
ABCF3-217ENST00000489719 XAGE1AQ9HD64 81 aa10.93□□□□□ -0.66
ABCF3-217ENST00000489719 A0A096LNJ9 63 aa10.92□□□□□ -0.66
ABCF3-217ENST00000489719 ATP5LO75964 103 aa10.92□□□□□ -0.66
ABCF3-217ENST00000489719 PMCHL1Q16048 86 aa10.92□□□□□ -0.66
ABCF3-217ENST00000489719 IGLC3P0DOY3 106 aa10.91□□□□□ -0.66
ABCF3-217ENST00000489719 KRTAP10-8P60410 259 aa10.91□□□□□ -0.66
ABCF3-217ENST00000489719 LBHQ53QV2 105 aaPredicted RBP10.91□□□□□ -0.66
ABCF3-217ENST00000489719 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
ABCF3-217ENST00000489719 DIRC1Q969H9 104 aa10.91□□□□□ -0.66
ABCF3-217ENST00000489719 C22orf24Q9Y442 160 aa10.91□□□□□ -0.66
ABCF3-217ENST00000489719 BAGE3Q86Y29 109 aa10.9□□□□□ -0.66
ABCF3-217ENST00000489719 YPEL4Q96NS1 127 aa10.88□□□□□ -0.67
ABCF3-217ENST00000489719 HMCN2Q8NDA2 5059 aa10.88□□□□□ -0.67
ABCF3-217ENST00000489719 ZNF22P17026 224 aaPredicted RBP10.86□□□□□ -0.67
ABCF3-217ENST00000489719 CHCHD1Q96BP2 118 aaKnown RBP10.86□□□□□ -0.67
ABCF3-217ENST00000489719 TMEM170BQ5T4T1 132 aa10.85□□□□□ -0.67
ABCF3-217ENST00000489719 TP73-AS1Q9UF72 201 aa10.85□□□□□ -0.67
ABCF3-217ENST00000489719 IGLV5-39A0A0G2JS06 123 aa10.84□□□□□ -0.67
ABCF3-217ENST00000489719 H0Y9J4 135 aa10.84□□□□□ -0.67
ABCF3-217ENST00000489719 ODF1Q14990 250 aa10.84□□□□□ -0.67
ABCF3-217ENST00000489719 MRPL55Q7Z7F7 128 aaKnown RBP10.84□□□□□ -0.67
ABCF3-217ENST00000489719 CHTOPQ9Y3Y2 248 aaKnown RBP10.84□□□□□ -0.67
ABCF3-217ENST00000489719 TNXBP22105 4242 aa10.83□□□□□ -0.68
ABCF3-217ENST00000489719 NUPR1O60356 82 aa10.83□□□□□ -0.68
ABCF3-217ENST00000489719 CBLN2Q8IUK8 224 aa10.83□□□□□ -0.68
ABCF3-217ENST00000489719 C11orf86A6NJI1 115 aa10.82□□□□□ -0.68
ABCF3-217ENST00000489719 PFN2P35080 140 aa10.82□□□□□ -0.68
ABCF3-217ENST00000489719 IFI27L1Q96BM0 104 aa10.82□□□□□ -0.68
ABCF3-217ENST00000489719 HSBP1O75506 76 aa10.8□□□□□ -0.68
ABCF3-217ENST00000489719 SLC7A5P1Q8MH63 180 aa10.8□□□□□ -0.68
ABCF3-217ENST00000489719 NKAPP1Q8N9T2 125 aa10.8□□□□□ -0.68
ABCF3-217ENST00000489719 LINC00167Q96N53 147 aa10.8□□□□□ -0.68
ABCF3-217ENST00000489719 TRAV12-1A0A0B4J245 112 aa10.79□□□□□ -0.68
ABCF3-217ENST00000489719 ZNF861PO60384 105 aa10.79□□□□□ -0.68
ABCF3-217ENST00000489719 SFTA2Q6UW10 78 aa10.79□□□□□ -0.68
ABCF3-217ENST00000489719 ERG28Q9UKR5 140 aa10.79□□□□□ -0.68
ABCF3-217ENST00000489719 RPL37AP8A6NKH3 93 aa10.78□□□□□ -0.68
ABCF3-217ENST00000489719 TRGC2P03986 189 aa10.78□□□□□ -0.68
ABCF3-217ENST00000489719 COX17Q14061 63 aa10.78□□□□□ -0.68
ABCF3-217ENST00000489719 PRR26Q8N8Z3 221 aa10.78□□□□□ -0.68
ABCF3-217ENST00000489719 ZNF625Q96I27 306 aaPredicted RBP10.78□□□□□ -0.68
ABCF3-217ENST00000489719 GAGE10A6NGK3 116 aa10.77□□□□□ -0.69
ABCF3-217ENST00000489719 FAM19A2Q8N3H0 131 aa10.77□□□□□ -0.69
ABCF3-217ENST00000489719 IGLV5-37A0A075B6J1 123 aa10.76□□□□□ -0.69
ABCF3-217ENST00000489719 BCE1O60756 84 aa10.75□□□□□ -0.69
ABCF3-217ENST00000489719 RPL28P46779 137 aaKnown RBP10.75□□□□□ -0.69
ABCF3-217ENST00000489719 SND1-IT1Q9HBX3 110 aa10.75□□□□□ -0.69
ABCF3-217ENST00000489719 IGLV1-50A0A075B6I6 118 aa10.74□□□□□ -0.69
ABCF3-217ENST00000489719 TMEM223A0PJW6 202 aa10.74□□□□□ -0.69
ABCF3-217ENST00000489719 RPL24P83731 157 aaKnown RBP10.74□□□□□ -0.69
ABCF3-217ENST00000489719 LINC00158P58513 81 aa10.73□□□□□ -0.69
ABCF3-217ENST00000489719 H0Y8G0 127 aa10.71□□□□□ -0.69
ABCF3-217ENST00000489719 LEPROTL1O95214 131 aa10.71□□□□□ -0.69
ABCF3-217ENST00000489719 KRTAP1-4P0C5Y4 121 aa10.71□□□□□ -0.69
ABCF3-217ENST00000489719 ATP6V1G1O75348 118 aa10.7□□□□□ -0.7
ABCF3-217ENST00000489719 SERF1AO75920 110 aa10.7□□□□□ -0.7
ABCF3-217ENST00000489719 RPL13AP40429 203 aaKnown RBP10.7□□□□□ -0.7
ABCF3-217ENST00000489719 IGKV2-28A0A075B6P5 120 aa10.69□□□□□ -0.7
ABCF3-217ENST00000489719 COLCA2A8K830 154 aa10.69□□□□□ -0.7
ABCF3-217ENST00000489719 SCO1O75880 301 aa10.69□□□□□ -0.7
ABCF3-217ENST00000489719 IGKV2D-28P01615 120 aa10.69□□□□□ -0.7
ABCF3-217ENST00000489719 VPREB1P12018 145 aa10.69□□□□□ -0.7
ABCF3-217ENST00000489719 UBE2AP49459 152 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms