RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 LINC00469Q8N7U9 141 aa8.6□□□□□ -1.03
VTI1A-206ENST00000489142 GEMIN7Q9H840 131 aaKnown RBP8.6□□□□□ -1.03
VTI1A-206ENST00000489142 CKS1BP61024 79 aa8.59□□□□□ -1.03
VTI1A-206ENST00000489142 HERVK_113P63121 156 aa8.59□□□□□ -1.03
VTI1A-206ENST00000489142 C6orf226Q5I0X4 101 aa8.59□□□□□ -1.03
VTI1A-206ENST00000489142 C9orf129Q5T035 196 aaKnown RBP8.59□□□□□ -1.03
VTI1A-206ENST00000489142 ERASQ7Z444 233 aa8.59□□□□□ -1.03
VTI1A-206ENST00000489142 CARHSP1Q9Y2V2 147 aaKnown RBP8.59□□□□□ -1.03
VTI1A-206ENST00000489142 NDUFC2-KCTD14E9PQ53 114 aa8.58□□□□□ -1.04
VTI1A-206ENST00000489142 M0QXV9 152 aa8.58□□□□□ -1.04
VTI1A-206ENST00000489142 G0S2P27469 103 aa8.58□□□□□ -1.04
VTI1A-206ENST00000489142 RHEBQ15382 184 aa8.58□□□□□ -1.04
VTI1A-206ENST00000489142 PAPPA-AS1Q5QFB9 102 aa8.58□□□□□ -1.04
VTI1A-206ENST00000489142 Q8IZM0 81 aa8.58□□□□□ -1.04
VTI1A-206ENST00000489142 FA2HQ7L5A8 372 aa8.57□□□□□ -1.04
VTI1A-206ENST00000489142 LINC01546A6NGU7 62 aa8.56□□□□□ -1.04
VTI1A-206ENST00000489142 SEC11AP67812 179 aa8.56□□□□□ -1.04
VTI1A-206ENST00000489142 SMCO4Q9NRQ5 59 aa8.56□□□□□ -1.04
VTI1A-206ENST00000489142 SMIM1B2RUZ4 78 aa8.55□□□□□ -1.04
VTI1A-206ENST00000489142 IGLV7-43P04211 117 aa8.55□□□□□ -1.04
VTI1A-206ENST00000489142 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
VTI1A-206ENST00000489142 UBE2BP63146 152 aa8.55□□□□□ -1.04
VTI1A-206ENST00000489142 COX19Q49B96 90 aa8.55□□□□□ -1.04
VTI1A-206ENST00000489142 CST9LQ9H4G1 147 aa8.55□□□□□ -1.04
VTI1A-206ENST00000489142 XAGE1AQ9HD64 81 aa8.55□□□□□ -1.04
VTI1A-206ENST00000489142 TINCRA0A1B0GVN0 87 aa8.54□□□□□ -1.04
VTI1A-206ENST00000489142 SPINK8P0C7L1 97 aa8.54□□□□□ -1.04
VTI1A-206ENST00000489142 F8VRH5 84 aa8.53□□□□□ -1.04
VTI1A-206ENST00000489142 APOC3P02656 99 aa8.53□□□□□ -1.04
VTI1A-206ENST00000489142 PMCHL1Q16048 86 aa8.53□□□□□ -1.04
VTI1A-206ENST00000489142 URB1-AS1Q96HZ7 61 aa8.53□□□□□ -1.04
VTI1A-206ENST00000489142 TRAPPC1Q9Y5R8 145 aa8.53□□□□□ -1.04
VTI1A-206ENST00000489142 A0A096LNJ9 63 aa8.52□□□□□ -1.05
VTI1A-206ENST00000489142 NDUFA6P56556 154 aa8.52□□□□□ -1.05
VTI1A-206ENST00000489142 PMVKQ15126 192 aa8.52□□□□□ -1.05
VTI1A-206ENST00000489142 COX7B2Q8TF08 81 aa8.52□□□□□ -1.05
VTI1A-206ENST00000489142 IGLV5-45A0A087WSX0 123 aa8.51□□□□□ -1.05
VTI1A-206ENST00000489142 PDZD11Q5EBL8 140 aa8.51□□□□□ -1.05
VTI1A-206ENST00000489142 C18orf32Q8TCD1 76 aa8.51□□□□□ -1.05
VTI1A-206ENST00000489142 DIRC1Q969H9 104 aa8.5□□□□□ -1.05
VTI1A-206ENST00000489142 C22orf24Q9Y442 160 aa8.5□□□□□ -1.05
VTI1A-206ENST00000489142 LINC01549A6NIU2 74 aa8.49□□□□□ -1.05
VTI1A-206ENST00000489142 H0Y9J4 135 aa8.49□□□□□ -1.05
VTI1A-206ENST00000489142 CXCL5P42830 114 aa8.49□□□□□ -1.05
VTI1A-206ENST00000489142 RAB5BP61020 215 aa8.49□□□□□ -1.05
VTI1A-206ENST00000489142 UBR4Q5T4S7 5183 aa8.49□□□□□ -1.05
VTI1A-206ENST00000489142 SNAPINO95295 136 aa8.48□□□□□ -1.05
VTI1A-206ENST00000489142 LINC00614P0C842 121 aa8.48□□□□□ -1.05
VTI1A-206ENST00000489142 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
VTI1A-206ENST00000489142 IGLC3P0DOY3 106 aa8.47□□□□□ -1.05
VTI1A-206ENST00000489142 SVBPQ8N300 66 aa8.47□□□□□ -1.05
VTI1A-206ENST00000489142 H3BRM9 83 aa8.46□□□□□ -1.06
VTI1A-206ENST00000489142 HBDP02042 147 aa8.46□□□□□ -1.06
VTI1A-206ENST00000489142 NDUFA5Q16718 116 aa8.46□□□□□ -1.06
VTI1A-206ENST00000489142 ZNF22P17026 224 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-206ENST00000489142 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
VTI1A-206ENST00000489142 GAGE10A6NGK3 116 aa8.44□□□□□ -1.06
VTI1A-206ENST00000489142 RPL37AP8A6NKH3 93 aa8.44□□□□□ -1.06
VTI1A-206ENST00000489142 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
VTI1A-206ENST00000489142 YPEL4Q96NS1 127 aa8.44□□□□□ -1.06
VTI1A-206ENST00000489142 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
VTI1A-206ENST00000489142 SCO1O75880 301 aa8.43□□□□□ -1.06
VTI1A-206ENST00000489142 PFN2P35080 140 aa8.43□□□□□ -1.06
VTI1A-206ENST00000489142 LBHQ53QV2 105 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-206ENST00000489142 BAGE3Q86Y29 109 aa8.43□□□□□ -1.06
VTI1A-206ENST00000489142 IGLV5-39A0A0G2JS06 123 aa8.42□□□□□ -1.06
VTI1A-206ENST00000489142 ATP5LO75964 103 aa8.42□□□□□ -1.06
VTI1A-206ENST00000489142 LINC00167Q96N53 147 aa8.42□□□□□ -1.06
VTI1A-206ENST00000489142 LRP2P98164 4655 aa8.41□□□□□ -1.06
VTI1A-206ENST00000489142 TMEM170BQ5T4T1 132 aa8.41□□□□□ -1.06
VTI1A-206ENST00000489142 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
VTI1A-206ENST00000489142 ZNF625Q96I27 306 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-206ENST00000489142 TP73-AS1Q9UF72 201 aa8.41□□□□□ -1.06
VTI1A-206ENST00000489142 NUPR1O60356 82 aa8.4□□□□□ -1.06
VTI1A-206ENST00000489142 ZNF861PO60384 105 aa8.4□□□□□ -1.06
VTI1A-206ENST00000489142 NKAPP1Q8N9T2 125 aa8.39□□□□□ -1.07
VTI1A-206ENST00000489142 BCE1O60756 84 aa8.38□□□□□ -1.07
VTI1A-206ENST00000489142 ERG28Q9UKR5 140 aa8.38□□□□□ -1.07
VTI1A-206ENST00000489142 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
VTI1A-206ENST00000489142 IGLV1-50A0A075B6I6 118 aa8.37□□□□□ -1.07
VTI1A-206ENST00000489142 IGLV5-37A0A075B6J1 123 aa8.37□□□□□ -1.07
VTI1A-206ENST00000489142 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
VTI1A-206ENST00000489142 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
VTI1A-206ENST00000489142 SND1-IT1Q9HBX3 110 aa8.37□□□□□ -1.07
VTI1A-206ENST00000489142 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
VTI1A-206ENST00000489142 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
VTI1A-206ENST00000489142 CHCHD1Q96BP2 118 aaKnown RBP8.36□□□□□ -1.07
VTI1A-206ENST00000489142 RPL28P46779 137 aaKnown RBP8.35□□□□□ -1.07
VTI1A-206ENST00000489142 Q8NDZ9 215 aa8.35□□□□□ -1.07
VTI1A-206ENST00000489142 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
VTI1A-206ENST00000489142 H0Y8G0 127 aa8.34□□□□□ -1.07
VTI1A-206ENST00000489142 VPREB1P12018 145 aa8.34□□□□□ -1.07
VTI1A-206ENST00000489142 SLC7A5P1Q8MH63 180 aa8.34□□□□□ -1.07
VTI1A-206ENST00000489142 TMEM223A0PJW6 202 aa8.33□□□□□ -1.08
VTI1A-206ENST00000489142 TRGC2P03986 189 aa8.33□□□□□ -1.08
VTI1A-206ENST00000489142 UBE2AP49459 152 aa8.33□□□□□ -1.08
VTI1A-206ENST00000489142 ANAPC11Q9NYG5 84 aa8.33□□□□□ -1.08
VTI1A-206ENST00000489142 A0A087X002 238 aa8.32□□□□□ -1.08
VTI1A-206ENST00000489142 TRAV12-1A0A0B4J245 112 aa8.32□□□□□ -1.08
VTI1A-206ENST00000489142 TMEM238C9JI98 176 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms