RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 OBSCN-AS1Q96MR7 158 aa13.69□□□□□ -0.22
HMG20B-213ENST00000488973 KMT2BQ9UMN6 2715 aaPredicted RBP13.68□□□□□ -0.22
HMG20B-213ENST00000488973 Q6JHZ5 121 aa13.68□□□□□ -0.22
HMG20B-213ENST00000488973 GIG44P09565 113 aaPredicted RBP13.68□□□□□ -0.22
HMG20B-213ENST00000488973 WNK1Q9H4A3 2382 aa13.68□□□□□ -0.22
HMG20B-213ENST00000488973 TEX15Q9BXT5 2789 aa13.67□□□□□ -0.22
HMG20B-213ENST00000488973 FHL2Q14192 279 aa13.67□□□□□ -0.22
HMG20B-213ENST00000488973 C1orf195Q5TG92 126 aa13.67□□□□□ -0.22
HMG20B-213ENST00000488973 A0A087WZ39 114 aa13.66□□□□□ -0.22
HMG20B-213ENST00000488973 USP17L23D6RBM5 183 aa13.66□□□□□ -0.22
HMG20B-213ENST00000488973 CMC4P56277 68 aaPredicted RBP13.66□□□□□ -0.22
HMG20B-213ENST00000488973 IGLV4-60A0A075B6I1 120 aa13.66□□□□□ -0.22
HMG20B-213ENST00000488973 IGKV3OR2-268A0A0C4DH90 116 aa13.66□□□□□ -0.22
HMG20B-213ENST00000488973 CCL24O00175 119 aa13.66□□□□□ -0.22
HMG20B-213ENST00000488973 TRBV6-8A0A0A6YYG3 113 aa13.65□□□□□ -0.22
HMG20B-213ENST00000488973 FAM236DA0A1B0GTK5 79 aa13.65□□□□□ -0.22
HMG20B-213ENST00000488973 FAM236CP0DP71 79 aa13.65□□□□□ -0.22
HMG20B-213ENST00000488973 CENPEQ02224 2701 aa13.65□□□□□ -0.22
HMG20B-213ENST00000488973 TRGV4A0A0C4DH28 118 aa13.65□□□□□ -0.22
HMG20B-213ENST00000488973 C9orf129Q5T035 196 aaKnown RBP13.64□□□□□ -0.23
HMG20B-213ENST00000488973 C14orf132Q9NPU4 83 aa13.64□□□□□ -0.23
HMG20B-213ENST00000488973 C2CD3Q4AC94 2353 aa13.64□□□□□ -0.23
HMG20B-213ENST00000488973 WFDC11Q8NEX6 87 aa13.63□□□□□ -0.23
HMG20B-213ENST00000488973 ABCA12Q86UK0 2595 aa13.63□□□□□ -0.23
HMG20B-213ENST00000488973 C16orf95Q9H693 158 aa13.63□□□□□ -0.23
HMG20B-213ENST00000488973 NOTCH3Q9UM47 2321 aa13.63□□□□□ -0.23
HMG20B-213ENST00000488973 A0A1W2PRX2 142 aa13.62□□□□□ -0.23
HMG20B-213ENST00000488973 LECT2O14960 151 aa13.62□□□□□ -0.23
HMG20B-213ENST00000488973 PAX4O43316 350 aa13.62□□□□□ -0.23
HMG20B-213ENST00000488973 LY6G6DO95868 133 aa13.61□□□□□ -0.23
HMG20B-213ENST00000488973 LINC01561Q8N1V8 128 aa13.61□□□□□ -0.23
HMG20B-213ENST00000488973 APCP25054 2843 aa13.61□□□□□ -0.23
HMG20B-213ENST00000488973 SMIM26A0A096LP01 95 aa13.6□□□□□ -0.23
HMG20B-213ENST00000488973 C11orf44Q8N8P7 122 aa13.6□□□□□ -0.23
HMG20B-213ENST00000488973 CSNK1G2-AS1Q8NCQ2 148 aa13.59□□□□□ -0.23
HMG20B-213ENST00000488973 LINC00846Q9NV44 126 aa13.59□□□□□ -0.23
HMG20B-213ENST00000488973 TENM4Q6N022 2769 aa13.58□□□□□ -0.23
HMG20B-213ENST00000488973 LINC00959A0A1B0GUT2 108 aa13.58□□□□□ -0.24
HMG20B-213ENST00000488973 C6orf226Q5I0X4 101 aa13.57□□□□□ -0.24
HMG20B-213ENST00000488973 ORMDL1Q9P0S3 153 aa13.56□□□□□ -0.24
HMG20B-213ENST00000488973 NCR3O14931 201 aa13.56□□□□□ -0.24
HMG20B-213ENST00000488973 WFDC10AQ9H1F0 79 aa13.56□□□□□ -0.24
HMG20B-213ENST00000488973 IGKV3D-7A0A0C4DH55 119 aa13.55□□□□□ -0.24
HMG20B-213ENST00000488973 DNAJC9-AS1A6NH13 148 aa13.55□□□□□ -0.24
HMG20B-213ENST00000488973 C19orf73Q9NVV2 129 aa13.55□□□□□ -0.24
HMG20B-213ENST00000488973 A0A087WVE0 104 aa13.54□□□□□ -0.24
HMG20B-213ENST00000488973 SETXQ7Z333 2677 aaKnown RBP13.54□□□□□ -0.24
HMG20B-213ENST00000488973 TLN2Q9Y4G6 2542 aa13.54□□□□□ -0.24
HMG20B-213ENST00000488973 SLPIP03973 132 aa13.53□□□□□ -0.24
HMG20B-213ENST00000488973 LINC00167Q96N53 147 aa13.53□□□□□ -0.24
HMG20B-213ENST00000488973 Q8IZM0 81 aa13.53□□□□□ -0.24
HMG20B-213ENST00000488973 NBPF19A0A087WUL8 3843 aa13.52□□□□□ -0.24
HMG20B-213ENST00000488973 SS18Q15532 418 aa13.52□□□□□ -0.24
HMG20B-213ENST00000488973 FP248Q71RG6 208 aaPredicted RBP13.52□□□□□ -0.24
HMG20B-213ENST00000488973 IGLV1-51P01701 117 aa13.52□□□□□ -0.25
HMG20B-213ENST00000488973 KRTAP1-1Q07627 177 aa13.51□□□□□ -0.25
HMG20B-213ENST00000488973 CCKP06307 115 aa13.51□□□□□ -0.25
HMG20B-213ENST00000488973 C11orf68Q9H3H3 251 aaKnown RBP13.51□□□□□ -0.25
HMG20B-213ENST00000488973 A0A1B0GUV1 79 aa13.5□□□□□ -0.25
HMG20B-213ENST00000488973 JMJD1CQ15652 2540 aa13.5□□□□□ -0.25
HMG20B-213ENST00000488973 XCL1P47992 114 aa13.5□□□□□ -0.25
HMG20B-213ENST00000488973 JMJD7-PLA2G4BH0Y9G9 81 aa13.49□□□□□ -0.25
HMG20B-213ENST00000488973 GHRHP01286 108 aa13.49□□□□□ -0.25
HMG20B-213ENST00000488973 H7BZZ5 65 aa13.48□□□□□ -0.25
HMG20B-213ENST00000488973 ESM1Q9NQ30 184 aa13.48□□□□□ -0.25
HMG20B-213ENST00000488973 NANOS2P60321 138 aaKnown RBP13.47□□□□□ -0.25
HMG20B-213ENST00000488973 S100A7L2Q5SY68 101 aa13.47□□□□□ -0.25
HMG20B-213ENST00000488973 BRK1Q8WUW1 75 aa13.47□□□□□ -0.25
HMG20B-213ENST00000488973 C20orf197Q8N268 126 aa13.47□□□□□ -0.25
HMG20B-213ENST00000488973 Q8N814 137 aa13.47□□□□□ -0.25
HMG20B-213ENST00000488973 ZNF469Q96JG9 3925 aaPredicted RBP13.46□□□□□ -0.25
HMG20B-213ENST00000488973 ITPR3Q14573 2671 aa13.46□□□□□ -0.26
HMG20B-213ENST00000488973 PDZD2O15018 2839 aa13.45□□□□□ -0.26
HMG20B-213ENST00000488973 NF1P21359 2839 aa13.45□□□□□ -0.26
HMG20B-213ENST00000488973 TMEM256-PLSCR3K7ERE1 68 aa13.45□□□□□ -0.26
HMG20B-213ENST00000488973 GYPEP15421 78 aa13.45□□□□□ -0.26
HMG20B-213ENST00000488973 LINC00612Q8N6U2 182 aa13.45□□□□□ -0.26
HMG20B-213ENST00000488973 A0A0U1RQV1 116 aa13.44□□□□□ -0.26
HMG20B-213ENST00000488973 DEFB130BP0DP73 79 aa13.44□□□□□ -0.26
HMG20B-213ENST00000488973 DEFB130AP0DP74 79 aa13.44□□□□□ -0.26
HMG20B-213ENST00000488973 COX17Q14061 63 aa13.44□□□□□ -0.26
HMG20B-213ENST00000488973 HELZ2Q9BYK8 2649 aaKnown RBP13.44□□□□□ -0.26
HMG20B-213ENST00000488973 ATP5EP2Q5VTU8 51 aa13.43□□□□□ -0.26
HMG20B-213ENST00000488973 LINC01006Q8NI28 216 aa13.43□□□□□ -0.26
HMG20B-213ENST00000488973 BCE1O60756 84 aa13.42□□□□□ -0.26
HMG20B-213ENST00000488973 NIPBLQ6KC79 2804 aaeCLIP13.41□□□□□ -0.266e-8■■□□□ 13
HMG20B-213ENST00000488973 PRR3P79522 188 aaKnown RBP13.41□□□□□ -0.26
HMG20B-213ENST00000488973 SONP18583 2426 aaKnown RBP13.41□□□□□ -0.26
HMG20B-213ENST00000488973 LYPD5Q6UWN5 251 aa13.41□□□□□ -0.26
HMG20B-213ENST00000488973 CUBNO60494 3623 aa13.41□□□□□ -0.26
HMG20B-213ENST00000488973 KIAA0087Q14695 138 aa13.4□□□□□ -0.26
HMG20B-213ENST00000488973 CLPSL2Q6UWE3 100 aa13.4□□□□□ -0.26
HMG20B-213ENST00000488973 KLKP1Q107X0 134 aa13.39□□□□□ -0.27
HMG20B-213ENST00000488973 IGHV4-28A0A0C4DH34 117 aa13.38□□□□□ -0.27
HMG20B-213ENST00000488973 CD164L2Q6UWJ8 174 aa13.38□□□□□ -0.27
HMG20B-213ENST00000488973 PRO0255Q9UI72 69 aa13.38□□□□□ -0.27
HMG20B-213ENST00000488973 CCDC168Q8NDH2 2452 aa13.38□□□□□ -0.27
HMG20B-213ENST00000488973 UNC79Q9P2D8 2635 aa13.37□□□□□ -0.27
HMG20B-213ENST00000488973 RNASE1P07998 156 aaKnown RBP13.37□□□□□ -0.27
HMG20B-213ENST00000488973 LINC00482Q8N8I6 264 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms