RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 SCN7AQ01118 1682 aa2.73□□□□□ -1.97
CTNNB1-215ENST00000488914 ZGRF1Q86YA3 2104 aa2.72□□□□□ -1.97
CTNNB1-215ENST00000488914 ANKRD36A6QL64 1941 aa2.72□□□□□ -1.97
CTNNB1-215ENST00000488914 KIAA0100Q14667 2235 aaKnown RBP2.72□□□□□ -1.97
CTNNB1-215ENST00000488914 ZCCHC13Q8WW36 166 aaKnown RBP2.72□□□□□ -1.97
CTNNB1-215ENST00000488914 SLIT1O75093 1534 aa2.72□□□□□ -1.97
CTNNB1-215ENST00000488914 CUL9Q8IWT3 2517 aa2.72□□□□□ -1.97
CTNNB1-215ENST00000488914 SRCAPQ6ZRS2 3230 aa2.71□□□□□ -1.98
CTNNB1-215ENST00000488914 MYO7BQ6PIF6 2116 aa2.71□□□□□ -1.98
CTNNB1-215ENST00000488914 TRBV6-1A0A0K0K1D8 114 aa2.71□□□□□ -1.98
CTNNB1-215ENST00000488914 J3QRE1 110 aa2.71□□□□□ -1.98
CTNNB1-215ENST00000488914 IL9P15248 144 aa2.71□□□□□ -1.98
CTNNB1-215ENST00000488914 SPINK7P58062 85 aa2.71□□□□□ -1.98
CTNNB1-215ENST00000488914 QSER1Q2KHR3 1735 aa2.71□□□□□ -1.98
CTNNB1-215ENST00000488914 SHROOM3Q8TF72 1996 aa2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 NUP214P35658 2090 aaPredicted RBP2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 IQGAP1P46940 1657 aa2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 LINC01546A6NGU7 62 aa2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 RNASE3P12724 160 aaKnown RBP2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 LINC00322Q6ZN03 302 aaPredicted RBP2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 WFDC9Q8NEX5 89 aa2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 TMEM14CQ9P0S9 112 aa2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 KLK9Q9UKQ9 250 aa2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 LY75O60449 1722 aa2.7□□□□□ -1.98
CTNNB1-215ENST00000488914 A0A087WTM6 91 aa2.69□□□□□ -1.98
CTNNB1-215ENST00000488914 IGKV2-40A0A087WW87 121 aaPredicted RBP2.69□□□□□ -1.98
CTNNB1-215ENST00000488914 A0A1W2PNN7 141 aa2.69□□□□□ -1.98
CTNNB1-215ENST00000488914 IGKV2D-40P01614 121 aaPredicted RBP2.69□□□□□ -1.98
CTNNB1-215ENST00000488914 C10orf113Q5VZT2 155 aa2.69□□□□□ -1.98
CTNNB1-215ENST00000488914 WFDC10AQ9H1F0 79 aa2.69□□□□□ -1.98
CTNNB1-215ENST00000488914 TNRC6BQ9UPQ9 1833 aaKnown RBP2.69□□□□□ -1.98
CTNNB1-215ENST00000488914 PI4KAP42356 2102 aa2.69□□□□□ -1.98
CTNNB1-215ENST00000488914 MYO7AQ13402 2215 aa2.69□□□□□ -1.98
CTNNB1-215ENST00000488914 DOT1LQ8TEK3 1739 aa2.68□□□□□ -1.98
CTNNB1-215ENST00000488914 TRAV40A0A0B4J280 105 aa2.68□□□□□ -1.98
CTNNB1-215ENST00000488914 NBDYA0A0U1RRE5 68 aa2.68□□□□□ -1.98
CTNNB1-215ENST00000488914 HRES1P13985 223 aa2.68□□□□□ -1.98
CTNNB1-215ENST00000488914 COX17Q14061 63 aa2.68□□□□□ -1.98
CTNNB1-215ENST00000488914 SAMD9LQ8IVG5 1584 aa2.68□□□□□ -1.98
CTNNB1-215ENST00000488914 ZNF831Q5JPB2 1677 aa2.68□□□□□ -1.98
CTNNB1-215ENST00000488914 BCORQ6W2J9 1755 aa2.67□□□□□ -1.98
CTNNB1-215ENST00000488914 COL4A5P29400 1685 aa2.67□□□□□ -1.98
CTNNB1-215ENST00000488914 A0A0G2JQZ4 141 aa2.67□□□□□ -1.98
CTNNB1-215ENST00000488914 IGIPA6NJ69 53 aa2.67□□□□□ -1.98
CTNNB1-215ENST00000488914 COX6B1P14854 86 aa2.67□□□□□ -1.98
CTNNB1-215ENST00000488914 CR1P17927 2039 aa2.67□□□□□ -1.98
CTNNB1-215ENST00000488914 DEPDC5O75140 1603 aa2.67□□□□□ -1.98
CTNNB1-215ENST00000488914 MED12Q93074 2177 aa2.67□□□□□ -1.98
CTNNB1-215ENST00000488914 COL27A1Q8IZC6 1860 aaPredicted RBP2.67□□□□□ -1.98
CTNNB1-215ENST00000488914 E9PCH4 1651 aa2.66□□□□□ -1.98
CTNNB1-215ENST00000488914 GCC2Q8IWJ2 1684 aa2.66□□□□□ -1.98
CTNNB1-215ENST00000488914 SPTBP11277 2137 aa2.66□□□□□ -1.98
CTNNB1-215ENST00000488914 TRGV4A0A0C4DH28 118 aa2.66□□□□□ -1.98
CTNNB1-215ENST00000488914 I3L3M4 83 aa2.66□□□□□ -1.98
CTNNB1-215ENST00000488914 RPL37AP61513 92 aaKnown RBP2.66□□□□□ -1.98
CTNNB1-215ENST00000488914 FXYD3Q14802 87 aa2.66□□□□□ -1.98
CTNNB1-215ENST00000488914 TPRXLQ17RH7 258 aa2.66□□□□□ -1.98
CTNNB1-215ENST00000488914 GAFA1Q96PS6 74 aa2.66□□□□□ -1.98
CTNNB1-215ENST00000488914 TET1Q8NFU7 2136 aa2.65□□□□□ -1.98
CTNNB1-215ENST00000488914 KRTAP10-10P60014 251 aa2.65□□□□□ -1.99
CTNNB1-215ENST00000488914 DEFB134Q4QY38 66 aa2.65□□□□□ -1.99
CTNNB1-215ENST00000488914 C5orf56Q8N8D9 126 aa2.65□□□□□ -1.99
CTNNB1-215ENST00000488914 ZNF625Q96I27 306 aaPredicted RBP2.65□□□□□ -1.99
CTNNB1-215ENST00000488914 PRRC2BQ5JSZ5 2229 aaKnown RBP2.65□□□□□ -1.99
CTNNB1-215ENST00000488914 PCDH15Q96QU1 1955 aa2.65□□□□□ -1.99
CTNNB1-215ENST00000488914 DDX60LQ5H9U9 1706 aaKnown RBP2.65□□□□□ -1.99
CTNNB1-215ENST00000488914 DLEC1Q9Y238 1755 aa2.64□□□□□ -1.99
CTNNB1-215ENST00000488914 MDC1Q14676 2089 aaKnown RBP2.64□□□□□ -1.99
CTNNB1-215ENST00000488914 IGKV2-29A2NJV5 120 aaPredicted RBP2.64□□□□□ -1.99
CTNNB1-215ENST00000488914 M0R1W7 72 aa2.64□□□□□ -1.99
CTNNB1-215ENST00000488914 SPINK4O60575 86 aa2.64□□□□□ -1.99
CTNNB1-215ENST00000488914 IGLV3-19P01714 112 aa2.64□□□□□ -1.99
CTNNB1-215ENST00000488914 DEFB112Q30KQ8 113 aa2.64□□□□□ -1.99
CTNNB1-215ENST00000488914 INTS1Q8N201 2190 aaKnown RBP2.64□□□□□ -1.99
CTNNB1-215ENST00000488914 FXYD6P3P58550 94 aa2.63□□□□□ -1.99
CTNNB1-215ENST00000488914 DEFB114Q30KQ6 69 aa2.63□□□□□ -1.99
CTNNB1-215ENST00000488914 C10orf55Q5SWW7 151 aa2.63□□□□□ -1.99
CTNNB1-215ENST00000488914 SPACA4Q8TDM5 124 aa2.63□□□□□ -1.99
CTNNB1-215ENST00000488914 Q96NJ1 140 aa2.63□□□□□ -1.99
CTNNB1-215ENST00000488914 LINC00472Q9H8W2 130 aa2.63□□□□□ -1.99
CTNNB1-215ENST00000488914 ESPL1Q14674 2120 aa2.62□□□□□ -1.99
CTNNB1-215ENST00000488914 CACNA1DQ01668 2161 aa2.62□□□□□ -1.99
CTNNB1-215ENST00000488914 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.62□□□□□ -1.99
CTNNB1-215ENST00000488914 ARL14EPLP0DKL9 152 aa2.62□□□□□ -1.99
CTNNB1-215ENST00000488914 SPAG17Q6Q759 2223 aa2.62□□□□□ -1.99
CTNNB1-215ENST00000488914 NRAPQ86VF7 1730 aa2.62□□□□□ -1.99
CTNNB1-215ENST00000488914 LOC110117498A0A087WWA1 95 aa2.61□□□□□ -1.99
CTNNB1-215ENST00000488914 TRGV1A0A0A0MS02 117 aa2.61□□□□□ -1.99
CTNNB1-215ENST00000488914 LINC00959A0A1B0GUT2 108 aa2.61□□□□□ -1.99
CTNNB1-215ENST00000488914 NDUFA4O00483 81 aa2.61□□□□□ -1.99
CTNNB1-215ENST00000488914 IGKV4-1P06312 121 aa2.61□□□□□ -1.99
CTNNB1-215ENST00000488914 FXYD4P59646 89 aa2.61□□□□□ -1.99
CTNNB1-215ENST00000488914 Q8N9L7 120 aa2.61□□□□□ -1.99
CTNNB1-215ENST00000488914 DDX60Q8IY21 1712 aaKnown RBP2.61□□□□□ -1.99
CTNNB1-215ENST00000488914 DUOX1Q9NRD9 1551 aa2.61□□□□□ -1.99
CTNNB1-215ENST00000488914 TRGV2A0A075B6R0 118 aa2.6□□□□□ -1.99
CTNNB1-215ENST00000488914 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
CTNNB1-215ENST00000488914 COA5Q86WW8 74 aa2.6□□□□□ -1.99
CTNNB1-215ENST00000488914 TIMM8BQ9Y5J9 83 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms