RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 DEFB130AP0DP74 79 aa9.32□□□□□ -0.92
CHD1L-208ENST00000488864 COL7A1Q02388 2944 aa9.31□□□□□ -0.92
CHD1L-208ENST00000488864 IGHV3-53P01767 116 aa9.31□□□□□ -0.92
CHD1L-208ENST00000488864 DAZ2Q13117 558 aaKnown RBP9.31□□□□□ -0.92
CHD1L-208ENST00000488864 LINC00242Q5T6M2 205 aa9.31□□□□□ -0.92
CHD1L-208ENST00000488864 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
CHD1L-208ENST00000488864 IGLV5-39A0A0G2JS06 123 aa9.31□□□□□ -0.92
CHD1L-208ENST00000488864 MIFP14174 115 aa9.31□□□□□ -0.92
CHD1L-208ENST00000488864 DGAT2L7PQ6IED9 249 aa9.31□□□□□ -0.92
CHD1L-208ENST00000488864 DAZ4Q86SG3 579 aaKnown RBP9.31□□□□□ -0.92
CHD1L-208ENST00000488864 DAZ3Q9NR90 486 aaKnown RBP9.31□□□□□ -0.92
CHD1L-208ENST00000488864 LINC00694P0DN24 101 aa9.3□□□□□ -0.92
CHD1L-208ENST00000488864 FAM222AQ5U5X8 452 aa9.3□□□□□ -0.92
CHD1L-208ENST00000488864 FAM218AQ96MZ4 157 aa9.3□□□□□ -0.92
CHD1L-208ENST00000488864 TRGV2A0A075B6R0 118 aa9.3□□□□□ -0.92
CHD1L-208ENST00000488864 ACYP1P07311 99 aa9.3□□□□□ -0.92
CHD1L-208ENST00000488864 CELA1Q9UNI1 258 aa9.3□□□□□ -0.92
CHD1L-208ENST00000488864 DNAH9Q9NYC9 4486 aa9.29□□□□□ -0.92
CHD1L-208ENST00000488864 BAALC-AS2P0C853 105 aa9.29□□□□□ -0.92
CHD1L-208ENST00000488864 SMIM1B2RUZ4 78 aa9.29□□□□□ -0.92
CHD1L-208ENST00000488864 DNAJC30Q96LL9 226 aa9.29□□□□□ -0.92
CHD1L-208ENST00000488864 TM2D3Q9BRN9 247 aa9.28□□□□□ -0.92
CHD1L-208ENST00000488864 IMUPQ9GZP8 106 aa9.28□□□□□ -0.92
CHD1L-208ENST00000488864 HERVK_113P63121 156 aa9.27□□□□□ -0.92
CHD1L-208ENST00000488864 TRAV13-1A0A0B4J241 112 aa9.27□□□□□ -0.93
CHD1L-208ENST00000488864 RS1O15537 224 aa9.27□□□□□ -0.93
CHD1L-208ENST00000488864 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
CHD1L-208ENST00000488864 LINC00643Q86TS7 51 aa9.27□□□□□ -0.93
CHD1L-208ENST00000488864 A0A0J9YWU9 116 aa9.26□□□□□ -0.93
CHD1L-208ENST00000488864 STAB2Q8WWQ8 2551 aa9.26□□□□□ -0.93
CHD1L-208ENST00000488864 TRACP01848 142 aa9.26□□□□□ -0.93
CHD1L-208ENST00000488864 TMEM126AQ9H061 195 aa9.26□□□□□ -0.93
CHD1L-208ENST00000488864 Q9HAA7 133 aa9.26□□□□□ -0.93
CHD1L-208ENST00000488864 SDIM1Q6ZPB5 146 aa9.25□□□□□ -0.93
CHD1L-208ENST00000488864 F5H768 121 aa9.24□□□□□ -0.93
CHD1L-208ENST00000488864 NTM-AS1Q6ZSK4 140 aa9.24□□□□□ -0.93
CHD1L-208ENST00000488864 LYRM9A8MSI8 78 aa9.24□□□□□ -0.93
CHD1L-208ENST00000488864 SPART-AS1P0CW21 52 aa9.24□□□□□ -0.93
CHD1L-208ENST00000488864 DAD1P61803 113 aa9.24□□□□□ -0.93
CHD1L-208ENST00000488864 C3orf22Q8N5N4 141 aa9.24□□□□□ -0.93
CHD1L-208ENST00000488864 B9D2Q9BPU9 175 aa9.24□□□□□ -0.93
CHD1L-208ENST00000488864 C9orf153Q5TBE3 101 aa9.23□□□□□ -0.93
CHD1L-208ENST00000488864 FAM19A3Q7Z5A8 133 aa9.23□□□□□ -0.93
CHD1L-208ENST00000488864 PPDPFQ9H3Y8 114 aa9.23□□□□□ -0.93
CHD1L-208ENST00000488864 GAGE2AQ6NT46 116 aa9.23□□□□□ -0.93
CHD1L-208ENST00000488864 LINC00612Q8N6U2 182 aa9.23□□□□□ -0.93
CHD1L-208ENST00000488864 HTN3P15516 51 aa9.22□□□□□ -0.93
CHD1L-208ENST00000488864 C5orf38Q86SI9 138 aa9.22□□□□□ -0.93
CHD1L-208ENST00000488864 COPS9Q8WXC6 57 aa9.22□□□□□ -0.93
CHD1L-208ENST00000488864 FBN3Q75N90 2809 aa9.21□□□□□ -0.93
CHD1L-208ENST00000488864 TRGV4A0A0C4DH28 118 aa9.21□□□□□ -0.93
CHD1L-208ENST00000488864 C9orf129Q5T035 196 aaKnown RBP9.21□□□□□ -0.93
CHD1L-208ENST00000488864 C11orf68Q9H3H3 251 aaKnown RBP9.21□□□□□ -0.94
CHD1L-208ENST00000488864 CDC42SE2Q9NRR3 84 aa9.21□□□□□ -0.94
CHD1L-208ENST00000488864 KLK5Q9Y337 293 aaPredicted RBP9.21□□□□□ -0.94
CHD1L-208ENST00000488864 UQCRQO14949 82 aa9.2□□□□□ -0.94
CHD1L-208ENST00000488864 MALP21145 153 aa9.2□□□□□ -0.94
CHD1L-208ENST00000488864 NANOS2P60321 138 aaKnown RBP9.2□□□□□ -0.94
CHD1L-208ENST00000488864 FHL2Q14192 279 aa9.2□□□□□ -0.94
CHD1L-208ENST00000488864 LINC00337Q8N6G1 96 aa9.2□□□□□ -0.94
CHD1L-208ENST00000488864 IGKV2-28A0A075B6P5 120 aa9.19□□□□□ -0.94
CHD1L-208ENST00000488864 IGKV2D-28P01615 120 aa9.19□□□□□ -0.94
CHD1L-208ENST00000488864 RPL28P46779 137 aaKnown RBP9.19□□□□□ -0.94
CHD1L-208ENST00000488864 CFAP161Q6P656 301 aa9.19□□□□□ -0.94
CHD1L-208ENST00000488864 Q6ZTC4 211 aa9.19□□□□□ -0.94
CHD1L-208ENST00000488864 LINC00526Q96FQ7 95 aa9.19□□□□□ -0.94
CHD1L-208ENST00000488864 LOC100131303A0A0U1RQF7 123 aa9.19□□□□□ -0.94
CHD1L-208ENST00000488864 CXCL5P42830 114 aa9.19□□□□□ -0.94
CHD1L-208ENST00000488864 C11orf45Q8TAV5 145 aa9.19□□□□□ -0.94
CHD1L-208ENST00000488864 CSDC2Q9Y534 153 aaKnown RBP9.19□□□□□ -0.94
CHD1L-208ENST00000488864 A0A087WYN8 130 aa9.18□□□□□ -0.94
CHD1L-208ENST00000488864 C2orf48Q96LS8 159 aa9.18□□□□□ -0.94
CHD1L-208ENST00000488864 ATP5G1P05496 136 aa9.17□□□□□ -0.94
CHD1L-208ENST00000488864 INAFM2P0DMQ5 153 aa9.17□□□□□ -0.94
CHD1L-208ENST00000488864 MIR7-3HGQ8N6C7 128 aa9.17□□□□□ -0.94
CHD1L-208ENST00000488864 LOC107984640A0A0U1RRK4 108 aa9.17□□□□□ -0.94
CHD1L-208ENST00000488864 K7EQD1 137 aa9.17□□□□□ -0.94
CHD1L-208ENST00000488864 RPL36AP83881 106 aaKnown RBP9.17□□□□□ -0.94
CHD1L-208ENST00000488864 RPL36ALQ969Q0 106 aaKnown RBP9.17□□□□□ -0.94
CHD1L-208ENST00000488864 CRPP02741 224 aa9.16□□□□□ -0.94
CHD1L-208ENST00000488864 SMIM11BQ8TCY0 68 aa9.16□□□□□ -0.94
CHD1L-208ENST00000488864 TGP01266 2768 aa9.16□□□□□ -0.94
CHD1L-208ENST00000488864 TRAV13-2A0A0B4J235 113 aa9.16□□□□□ -0.94
CHD1L-208ENST00000488864 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
CHD1L-208ENST00000488864 C14orf132Q9NPU4 83 aa9.16□□□□□ -0.94
CHD1L-208ENST00000488864 COX7CP15954 63 aa9.15□□□□□ -0.94
CHD1L-208ENST00000488864 HIST1H4AP62805 103 aaKnown RBP9.15□□□□□ -0.94
CHD1L-208ENST00000488864 TOMM7Q9P0U1 55 aa9.15□□□□□ -0.94
CHD1L-208ENST00000488864 TRBV6-4A0A1B0GX49 114 aa9.14□□□□□ -0.95
CHD1L-208ENST00000488864 COX7B2Q8TF08 81 aa9.14□□□□□ -0.95
CHD1L-208ENST00000488864 PRO0255Q9UI72 69 aa9.14□□□□□ -0.95
CHD1L-208ENST00000488864 A0A096LPF7 62 aa9.13□□□□□ -0.95
CHD1L-208ENST00000488864 IGKV3D-7A0A0C4DH55 119 aa9.13□□□□□ -0.95
CHD1L-208ENST00000488864 IGKV3OR2-268A0A0C4DH90 116 aa9.13□□□□□ -0.95
CHD1L-208ENST00000488864 PAX4O43316 350 aa9.13□□□□□ -0.95
CHD1L-208ENST00000488864 GYPEP15421 78 aa9.13□□□□□ -0.95
CHD1L-208ENST00000488864 CYSTM1Q9H1C7 97 aa9.13□□□□□ -0.95
CHD1L-208ENST00000488864 TRBV10-1A0A0K0K1A3 114 aa9.13□□□□□ -0.95
CHD1L-208ENST00000488864 LINC00158P58513 81 aa9.12□□□□□ -0.95
CHD1L-208ENST00000488864 LINC00846Q9NV44 126 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms