RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TRBV6-8A0A0A6YYG3 113 aa13.16□□□□□ -0.3
CCM2-216ENST00000488727 H3BMG7 143 aa13.16□□□□□ -0.3
CCM2-216ENST00000488727 EIF4EBP3O60516 100 aaPredicted RBP13.16□□□□□ -0.3
CCM2-216ENST00000488727 Q9H8V8 135 aa13.16□□□□□ -0.3
CCM2-216ENST00000488727 PRO0461Q9UI25 63 aa13.16□□□□□ -0.3
CCM2-216ENST00000488727 SMIM1B2RUZ4 78 aa13.15□□□□□ -0.3
CCM2-216ENST00000488727 TRAV13-1A0A0B4J241 112 aa13.14□□□□□ -0.31
CCM2-216ENST00000488727 IGHV3-33P01772 117 aa13.13□□□□□ -0.31
CCM2-216ENST00000488727 ADAMTSL4-AS1Q5T5F5 129 aa13.13□□□□□ -0.31
CCM2-216ENST00000488727 IFITM1P13164 125 aa13.13□□□□□ -0.31
CCM2-216ENST00000488727 TRBV20-1A0A075B6N2 111 aa13.12□□□□□ -0.31
CCM2-216ENST00000488727 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
CCM2-216ENST00000488727 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
CCM2-216ENST00000488727 DNAH6Q9C0G6 4158 aa13.11□□□□□ -0.31
CCM2-216ENST00000488727 RYR3Q15413 4870 aa13.11□□□□□ -0.31
CCM2-216ENST00000488727 GAGE6Q13070 117 aa13.1□□□□□ -0.31
CCM2-216ENST00000488727 WFDC2Q14508 124 aa13.1□□□□□ -0.31
CCM2-216ENST00000488727 RNF151Q2KHN1 245 aa13.1□□□□□ -0.31
CCM2-216ENST00000488727 Q8N3U1 123 aa13.1□□□□□ -0.31
CCM2-216ENST00000488727 KRTAP1-5Q9BYS1 174 aa13.1□□□□□ -0.31
CCM2-216ENST00000488727 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
CCM2-216ENST00000488727 M0R2N4 97 aa13.09□□□□□ -0.31
CCM2-216ENST00000488727 DNAH10OSP0CZ25 163 aa13.09□□□□□ -0.31
CCM2-216ENST00000488727 NBDYA0A0U1RRE5 68 aa13.08□□□□□ -0.32
CCM2-216ENST00000488727 CIRBPQ14011 172 aaKnown RBP13.08□□□□□ -0.32
CCM2-216ENST00000488727 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
CCM2-216ENST00000488727 CHCHD5Q9BSY4 110 aa13.08□□□□□ -0.32
CCM2-216ENST00000488727 PRSS2P07478 247 aa13.08□□□□□ -0.32
CCM2-216ENST00000488727 PSMB2P49721 201 aa13.08□□□□□ -0.32
CCM2-216ENST00000488727 Q6ZR54 194 aa13.08□□□□□ -0.32
CCM2-216ENST00000488727 IGLV4-60A0A075B6I1 120 aa13.07□□□□□ -0.32
CCM2-216ENST00000488727 HERV-K104P63124 156 aa13.07□□□□□ -0.32
CCM2-216ENST00000488727 LINC01556Q5JQF7 62 aa13.07□□□□□ -0.32
CCM2-216ENST00000488727 TCL1BO95988 128 aa13.06□□□□□ -0.32
CCM2-216ENST00000488727 SFTA2Q6UW10 78 aa13.05□□□□□ -0.32
CCM2-216ENST00000488727 VPS25Q9BRG1 176 aa13.05□□□□□ -0.32
CCM2-216ENST00000488727 PPDPFQ9H3Y8 114 aa13.05□□□□□ -0.32
CCM2-216ENST00000488727 COPS9Q8WXC6 57 aa13.05□□□□□ -0.32
CCM2-216ENST00000488727 TRBV30A0A0K0K1B3 111 aa13.04□□□□□ -0.32
CCM2-216ENST00000488727 A0A1B0GUV1 79 aa13.03□□□□□ -0.32
CCM2-216ENST00000488727 TTC32Q5I0X7 151 aa13.03□□□□□ -0.32
CCM2-216ENST00000488727 SCGB1C2P0DMR2 95 aa13.02□□□□□ -0.32
CCM2-216ENST00000488727 SMCPP49901 116 aaPredicted RBP13.02□□□□□ -0.32
CCM2-216ENST00000488727 IGHV3OR16-9A0A0B4J2B5 98 aa13.02□□□□□ -0.33
CCM2-216ENST00000488727 TMEM262E9PQX1 116 aa13.02□□□□□ -0.33
CCM2-216ENST00000488727 LINC00308Q8TCZ7 52 aa13.02□□□□□ -0.33
CCM2-216ENST00000488727 Q1RN00 199 aa13.01□□□□□ -0.33
CCM2-216ENST00000488727 ETDBQ3ZM63 59 aa13.01□□□□□ -0.33
CCM2-216ENST00000488727 MTURNQ8N3F0 131 aa13.01□□□□□ -0.33
CCM2-216ENST00000488727 COX7B2Q8TF08 81 aa13.01□□□□□ -0.33
CCM2-216ENST00000488727 A0A087WZ39 114 aa12.99□□□□□ -0.33
CCM2-216ENST00000488727 NPC2P61916 151 aa12.99□□□□□ -0.33
CCM2-216ENST00000488727 LINC00959A0A1B0GUT2 108 aa12.99□□□□□ -0.33
CCM2-216ENST00000488727 H7C2G1 150 aa12.99□□□□□ -0.33
CCM2-216ENST00000488727 J3QR89 54 aa12.99□□□□□ -0.33
CCM2-216ENST00000488727 M0QXV9 152 aa12.99□□□□□ -0.33
CCM2-216ENST00000488727 MEIG1Q5JSS6 88 aa12.99□□□□□ -0.33
CCM2-216ENST00000488727 DAND5Q8N907 189 aa12.99□□□□□ -0.33
CCM2-216ENST00000488727 TRIAP1O43715 76 aa12.97□□□□□ -0.33
CCM2-216ENST00000488727 DNAH2Q9P225 4427 aa12.97□□□□□ -0.33
CCM2-216ENST00000488727 IGKV3OR2-268A0A0C4DH90 116 aa12.96□□□□□ -0.33
CCM2-216ENST00000488727 IBA57-AS1B1ANH7 110 aa12.96□□□□□ -0.33
CCM2-216ENST00000488727 ATXN8Q156A1 80 aa12.96□□□□□ -0.34
CCM2-216ENST00000488727 LINC01561Q8N1V8 128 aa12.96□□□□□ -0.34
CCM2-216ENST00000488727 KLK12Q9UKR0 248 aa12.96□□□□□ -0.34
CCM2-216ENST00000488727 SOSTDC1Q6X4U4 206 aa12.95□□□□□ -0.34
CCM2-216ENST00000488727 RPL13AP40429 203 aaKnown RBP12.94□□□□□ -0.34
CCM2-216ENST00000488727 SS18Q15532 418 aa12.94□□□□□ -0.34
CCM2-216ENST00000488727 C1orf134Q5TEV5 83 aa12.94□□□□□ -0.34
CCM2-216ENST00000488727 C6orf223Q8N319 242 aa12.94□□□□□ -0.34
CCM2-216ENST00000488727 LINC01600Q96MT4 127 aa12.94□□□□□ -0.34
CCM2-216ENST00000488727 ANGP03950 147 aaKnown RBP12.93□□□□□ -0.34
CCM2-216ENST00000488727 COX6CP09669 75 aa12.93□□□□□ -0.34
CCM2-216ENST00000488727 TEN1Q86WV5 123 aa12.93□□□□□ -0.34
CCM2-216ENST00000488727 RTL8CO15255 209 aa12.92□□□□□ -0.34
CCM2-216ENST00000488727 Q9HAA7 133 aa12.92□□□□□ -0.34
CCM2-216ENST00000488727 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
CCM2-216ENST00000488727 FOXI1Q12951 378 aa12.91□□□□□ -0.34
CCM2-216ENST00000488727 FRAS1Q86XX4 4008 aa12.91□□□□□ -0.34
CCM2-216ENST00000488727 SLC25A20O43772 301 aa12.91□□□□□ -0.34
CCM2-216ENST00000488727 LINC01620Q4KN68 170 aa12.91□□□□□ -0.34
CCM2-216ENST00000488727 ENHOQ6UWT2 76 aa12.91□□□□□ -0.34
CCM2-216ENST00000488727 Q6ZRN7 208 aaPredicted RBP12.91□□□□□ -0.34
CCM2-216ENST00000488727 LINC00269Q8N2A0 174 aa12.91□□□□□ -0.34
CCM2-216ENST00000488727 UBE2WQ96B02 151 aa12.91□□□□□ -0.34
CCM2-216ENST00000488727 TOMM7Q9P0U1 55 aa12.91□□□□□ -0.34
CCM2-216ENST00000488727 DNAH10Q8IVF4 4471 aa12.9□□□□□ -0.34
CCM2-216ENST00000488727 CLPSL2Q6UWE3 100 aa12.9□□□□□ -0.34
CCM2-216ENST00000488727 C5orf38Q86SI9 138 aa12.9□□□□□ -0.34
CCM2-216ENST00000488727 PRR34Q9NV39 138 aa12.9□□□□□ -0.34
CCM2-216ENST00000488727 C9JAW5 83 aa12.89□□□□□ -0.35
CCM2-216ENST00000488727 PPDPFLQ8WWR9 84 aa12.89□□□□□ -0.35
CCM2-216ENST00000488727 Q8IZM0 81 aa12.88□□□□□ -0.35
CCM2-216ENST00000488727 CRPP02741 224 aa12.87□□□□□ -0.35
CCM2-216ENST00000488727 REG3AQ06141 175 aa12.87□□□□□ -0.35
CCM2-216ENST00000488727 TRBV10-2A0A0K0K1G8 114 aa12.86□□□□□ -0.35
CCM2-216ENST00000488727 LST1O00453 97 aa12.86□□□□□ -0.35
CCM2-216ENST00000488727 XCL1P47992 114 aa12.86□□□□□ -0.35
CCM2-216ENST00000488727 PCP4P48539 62 aa12.86□□□□□ -0.35
CCM2-216ENST00000488727 MIR7-3HGQ8N6C7 128 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 292.6 ms