RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 LINC01600Q96MT4 127 aa13.9□□□□□ -0.18
NECAB3-213ENST00000488489 LINC01620Q4KN68 170 aa13.9□□□□□ -0.18
NECAB3-213ENST00000488489 H3BNG1 76 aa13.89□□□□□ -0.19
NECAB3-213ENST00000488489 MIAQ16674 131 aa13.89□□□□□ -0.19
NECAB3-213ENST00000488489 ADAMTSL4-AS1Q5T5F5 129 aa13.88□□□□□ -0.19
NECAB3-213ENST00000488489 STAB2Q8WWQ8 2551 aa13.88□□□□□ -0.19
NECAB3-213ENST00000488489 TRIAP1O43715 76 aa13.88□□□□□ -0.19
NECAB3-213ENST00000488489 LYPD5Q6UWN5 251 aa13.88□□□□□ -0.19
NECAB3-213ENST00000488489 DEFB131BA0A096LNP1 70 aa13.87□□□□□ -0.19
NECAB3-213ENST00000488489 LELP1Q5T871 98 aa13.87□□□□□ -0.19
NECAB3-213ENST00000488489 ZFAND6Q6FIF0 208 aa13.87□□□□□ -0.19
NECAB3-213ENST00000488489 PRSS2P07478 247 aa13.87□□□□□ -0.19
NECAB3-213ENST00000488489 TIMM17BO60830 172 aa13.85□□□□□ -0.19
NECAB3-213ENST00000488489 IGLV5-39A0A0G2JS06 123 aa13.85□□□□□ -0.19
NECAB3-213ENST00000488489 LINC00959A0A1B0GUT2 108 aa13.85□□□□□ -0.19
NECAB3-213ENST00000488489 SMIM1B2RUZ4 78 aa13.85□□□□□ -0.19
NECAB3-213ENST00000488489 TRBV10-2A0A0K0K1G8 114 aa13.84□□□□□ -0.19
NECAB3-213ENST00000488489 CLPSL2Q6UWE3 100 aa13.84□□□□□ -0.19
NECAB3-213ENST00000488489 NTN5Q8WTR8 489 aaPredicted RBP13.84□□□□□ -0.19
NECAB3-213ENST00000488489 LINC00269Q8N2A0 174 aa13.83□□□□□ -0.2
NECAB3-213ENST00000488489 IGHV3OR16-9A0A0B4J2B5 98 aa13.82□□□□□ -0.2
NECAB3-213ENST00000488489 RPL13AP40429 203 aaKnown RBP13.82□□□□□ -0.2
NECAB3-213ENST00000488489 IFITM1P13164 125 aa13.81□□□□□ -0.2
NECAB3-213ENST00000488489 NDUFA1O15239 70 aa13.81□□□□□ -0.2
NECAB3-213ENST00000488489 ANGP03950 147 aaKnown RBP13.81□□□□□ -0.2
NECAB3-213ENST00000488489 COX6CP09669 75 aa13.8□□□□□ -0.2
NECAB3-213ENST00000488489 NPC2P61916 151 aa13.8□□□□□ -0.2
NECAB3-213ENST00000488489 ESRGQ1W209 222 aa13.79□□□□□ -0.2
NECAB3-213ENST00000488489 XCL1P47992 114 aa13.78□□□□□ -0.2
NECAB3-213ENST00000488489 REG3AQ06141 175 aa13.78□□□□□ -0.2
NECAB3-213ENST00000488489 PRKDCP78527 4128 aaKnown RBP13.77□□□□□ -0.2
NECAB3-213ENST00000488489 H3BT86 120 aa13.77□□□□□ -0.21
NECAB3-213ENST00000488489 C5orf38Q86SI9 138 aa13.77□□□□□ -0.21
NECAB3-213ENST00000488489 UBE2WQ96B02 151 aa13.77□□□□□ -0.21
NECAB3-213ENST00000488489 TRAV10A0A0B4J240 114 aa13.76□□□□□ -0.21
NECAB3-213ENST00000488489 SS18Q15532 418 aa13.76□□□□□ -0.21
NECAB3-213ENST00000488489 WFDC10BQ8IUB3 73 aa13.76□□□□□ -0.21
NECAB3-213ENST00000488489 A0A087WZ39 114 aa13.76□□□□□ -0.21
NECAB3-213ENST00000488489 TEX49A0A1B0GTD5 131 aa13.76□□□□□ -0.21
NECAB3-213ENST00000488489 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
NECAB3-213ENST00000488489 B9D2Q9BPU9 175 aa13.75□□□□□ -0.21
NECAB3-213ENST00000488489 LST1O00453 97 aa13.75□□□□□ -0.21
NECAB3-213ENST00000488489 MEGF8Q7Z7M0 2845 aa13.74□□□□□ -0.21
NECAB3-213ENST00000488489 IGLV10-54A0A075B6I4 117 aa13.74□□□□□ -0.21
NECAB3-213ENST00000488489 CIRBPQ14011 172 aaKnown RBP13.74□□□□□ -0.21
NECAB3-213ENST00000488489 Q9H8V8 135 aa13.74□□□□□ -0.21
NECAB3-213ENST00000488489 DAND5Q8N907 189 aa13.73□□□□□ -0.21
NECAB3-213ENST00000488489 CLEC2BQ92478 149 aa13.73□□□□□ -0.21
NECAB3-213ENST00000488489 KLK12Q9UKR0 248 aa13.73□□□□□ -0.21
NECAB3-213ENST00000488489 TRAV8-4A0A0B4J246 113 aa13.73□□□□□ -0.21
NECAB3-213ENST00000488489 CHCHD10Q8WYQ3 142 aaPredicted RBP13.72□□□□□ -0.21
NECAB3-213ENST00000488489 ZNF625Q96I27 306 aaPredicted RBP13.72□□□□□ -0.21
NECAB3-213ENST00000488489 PRR34Q9NV39 138 aa13.72□□□□□ -0.21
NECAB3-213ENST00000488489 LINC00308Q8TCZ7 52 aa13.71□□□□□ -0.21
NECAB3-213ENST00000488489 SNCGO76070 127 aa13.7□□□□□ -0.22
NECAB3-213ENST00000488489 ENHOQ6UWT2 76 aa13.7□□□□□ -0.22
NECAB3-213ENST00000488489 CD164L2Q6UWJ8 174 aa13.7□□□□□ -0.22
NECAB3-213ENST00000488489 COX7B2Q8TF08 81 aa13.7□□□□□ -0.22
NECAB3-213ENST00000488489 TOMM7Q9P0U1 55 aa13.7□□□□□ -0.22
NECAB3-213ENST00000488489 KRTAP21-3Q3LHN1 58 aa13.69□□□□□ -0.22
NECAB3-213ENST00000488489 COPS9Q8WXC6 57 aa13.67□□□□□ -0.22
NECAB3-213ENST00000488489 ANAPC13Q9BS18 74 aa13.67□□□□□ -0.22
NECAB3-213ENST00000488489 C15orf53Q8NAA6 179 aa13.67□□□□□ -0.22
NECAB3-213ENST00000488489 GAGE2BQ13066 116 aa13.66□□□□□ -0.22
NECAB3-213ENST00000488489 GAGE2EQ4V326 116 aa13.66□□□□□ -0.22
NECAB3-213ENST00000488489 Q6Q795 121 aa13.66□□□□□ -0.22
NECAB3-213ENST00000488489 GAGE2DQ9UEU5 116 aa13.66□□□□□ -0.22
NECAB3-213ENST00000488489 CSMD3Q7Z407 3707 aa13.65□□□□□ -0.22
NECAB3-213ENST00000488489 LYSTQ99698 3801 aa13.65□□□□□ -0.22
NECAB3-213ENST00000488489 SOSTDC1Q6X4U4 206 aa13.64□□□□□ -0.23
NECAB3-213ENST00000488489 A0A0U1RRA0 63 aa13.64□□□□□ -0.23
NECAB3-213ENST00000488489 FAM240AA0A1B0GVK7 77 aa13.64□□□□□ -0.23
NECAB3-213ENST00000488489 COX7A2LO14548 114 aa13.64□□□□□ -0.23
NECAB3-213ENST00000488489 LINC01561Q8N1V8 128 aa13.63□□□□□ -0.23
NECAB3-213ENST00000488489 HERV-K104P63124 156 aa13.63□□□□□ -0.23
NECAB3-213ENST00000488489 LINC00588Q9Y4M8 146 aa13.63□□□□□ -0.23
NECAB3-213ENST00000488489 LINC01556Q5JQF7 62 aa13.62□□□□□ -0.23
NECAB3-213ENST00000488489 MEIG1Q5JSS6 88 aa13.62□□□□□ -0.23
NECAB3-213ENST00000488489 PPDPFQ9H3Y8 114 aa13.62□□□□□ -0.23
NECAB3-213ENST00000488489 DYNC2H1Q8NCM8 4307 aaKnown RBP13.62□□□□□ -0.23
NECAB3-213ENST00000488489 CRPP02741 224 aa13.61□□□□□ -0.23
NECAB3-213ENST00000488489 C6orf226Q5I0X4 101 aa13.6□□□□□ -0.23
NECAB3-213ENST00000488489 NHLRC4P0CG21 123 aaPredicted RBP13.6□□□□□ -0.23
NECAB3-213ENST00000488489 Q8IZM0 81 aa13.6□□□□□ -0.23
NECAB3-213ENST00000488489 MALP21145 153 aa13.59□□□□□ -0.23
NECAB3-213ENST00000488489 NDUFV3P56181 108 aaKnown RBP13.59□□□□□ -0.23
NECAB3-213ENST00000488489 KIAA0087Q14695 138 aa13.59□□□□□ -0.23
NECAB3-213ENST00000488489 TENM2Q9NT68 2774 aa13.59□□□□□ -0.23
NECAB3-213ENST00000488489 DNAH10OSP0CZ25 163 aa13.58□□□□□ -0.24
NECAB3-213ENST00000488489 CCL18P55774 89 aa13.56□□□□□ -0.24
NECAB3-213ENST00000488489 TTC32Q5I0X7 151 aa13.56□□□□□ -0.24
NECAB3-213ENST00000488489 KRTAP26-1Q6PEX3 210 aa13.56□□□□□ -0.24
NECAB3-213ENST00000488489 DNAH7Q8WXX0 4024 aa13.56□□□□□ -0.24
NECAB3-213ENST00000488489 DNAH1Q9P2D7 4330 aa13.55□□□□□ -0.24
NECAB3-213ENST00000488489 TRACP01848 142 aa13.55□□□□□ -0.24
NECAB3-213ENST00000488489 KLK5Q9Y337 293 aaPredicted RBP13.53□□□□□ -0.24
NECAB3-213ENST00000488489 PLECQ15149 4684 aaKnown RBP13.53□□□□□ -0.24
NECAB3-213ENST00000488489 IBA57-AS1B1ANH7 110 aa13.52□□□□□ -0.25
NECAB3-213ENST00000488489 MIR7-3HGQ8N6C7 128 aa13.52□□□□□ -0.25
NECAB3-213ENST00000488489 LINC00526Q96FQ7 95 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms