RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 C6orf48Q9UBA6 75 aa10.71□□□□□ -0.69
HMG20B-212ENST00000487894 CDKN2A-AS1Q9UH64 79 aa10.71□□□□□ -0.69
HMG20B-212ENST00000487894 RPL18AQ02543 176 aaKnown RBP10.7□□□□□ -0.7
HMG20B-212ENST00000487894 LINC00614P0C842 121 aa10.69□□□□□ -0.7
HMG20B-212ENST00000487894 C7orf33Q8WU49 177 aa10.69□□□□□ -0.7
HMG20B-212ENST00000487894 GEMIN7Q9H840 131 aaKnown RBP10.69□□□□□ -0.7
HMG20B-212ENST00000487894 C2orf82Q6UX34 121 aa10.68□□□□□ -0.7
HMG20B-212ENST00000487894 CST9LQ9H4G1 147 aa10.68□□□□□ -0.7
HMG20B-212ENST00000487894 TINCRA0A1B0GVN0 87 aa10.67□□□□□ -0.7
HMG20B-212ENST00000487894 HBDP02042 147 aa10.67□□□□□ -0.7
HMG20B-212ENST00000487894 TLX1NBP0CAT3 122 aa10.67□□□□□ -0.7
HMG20B-212ENST00000487894 PMVKQ15126 192 aa10.67□□□□□ -0.7
HMG20B-212ENST00000487894 PMCHL1Q16048 86 aa10.67□□□□□ -0.7
HMG20B-212ENST00000487894 Q8IZM0 81 aa10.67□□□□□ -0.7
HMG20B-212ENST00000487894 IGLV5-45A0A087WSX0 123 aa10.66□□□□□ -0.7
HMG20B-212ENST00000487894 TRBV30A0A0K0K1B3 111 aa10.66□□□□□ -0.7
HMG20B-212ENST00000487894 RAB5BP61020 215 aa10.66□□□□□ -0.7
HMG20B-212ENST00000487894 Q6ZRP5 223 aa10.66□□□□□ -0.7
HMG20B-212ENST00000487894 LINC00469Q8N7U9 141 aa10.66□□□□□ -0.7
HMG20B-212ENST00000487894 PACRGQ96M98 296 aaPredicted RBP10.66□□□□□ -0.7
HMG20B-212ENST00000487894 TOMM7Q9P0U1 55 aa10.66□□□□□ -0.7
HMG20B-212ENST00000487894 A0A1W2PNN7 141 aa10.65□□□□□ -0.7
HMG20B-212ENST00000487894 PRSS2P07478 247 aa10.65□□□□□ -0.7
HMG20B-212ENST00000487894 PDZD11Q5EBL8 140 aa10.65□□□□□ -0.7
HMG20B-212ENST00000487894 KRTAP29-1A8MX34 341 aaPredicted RBP10.64□□□□□ -0.71
HMG20B-212ENST00000487894 SMIM1B2RUZ4 78 aa10.64□□□□□ -0.71
HMG20B-212ENST00000487894 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
HMG20B-212ENST00000487894 PRR3P79522 188 aaKnown RBP10.63□□□□□ -0.71
HMG20B-212ENST00000487894 C6orf226Q5I0X4 101 aa10.62□□□□□ -0.71
HMG20B-212ENST00000487894 IGLC3P0DOY3 106 aa10.61□□□□□ -0.71
HMG20B-212ENST00000487894 CKS1BP61024 79 aa10.61□□□□□ -0.71
HMG20B-212ENST00000487894 NDUFC2-KCTD14E9PQ53 114 aa10.6□□□□□ -0.71
HMG20B-212ENST00000487894 SPINK8P0C7L1 97 aa10.6□□□□□ -0.71
HMG20B-212ENST00000487894 GAGE2EQ4V326 116 aa10.6□□□□□ -0.71
HMG20B-212ENST00000487894 CHCHD1Q96BP2 118 aaKnown RBP10.6□□□□□ -0.71
HMG20B-212ENST00000487894 GAGE2DQ9UEU5 116 aa10.6□□□□□ -0.71
HMG20B-212ENST00000487894 FAM168BA1KXE4 195 aa10.59□□□□□ -0.71
HMG20B-212ENST00000487894 ATP5LO75964 103 aa10.59□□□□□ -0.71
HMG20B-212ENST00000487894 TRGC2P03986 189 aa10.59□□□□□ -0.71
HMG20B-212ENST00000487894 NDUFA6P56556 154 aa10.59□□□□□ -0.71
HMG20B-212ENST00000487894 COX7B2Q8TF08 81 aa10.59□□□□□ -0.71
HMG20B-212ENST00000487894 F8VRH5 84 aa10.58□□□□□ -0.72
HMG20B-212ENST00000487894 OXTP01178 125 aa10.58□□□□□ -0.72
HMG20B-212ENST00000487894 CXCL5P42830 114 aa10.58□□□□□ -0.72
HMG20B-212ENST00000487894 PHF5AQ7RTV0 110 aaKnown RBP10.58□□□□□ -0.72
HMG20B-212ENST00000487894 ZNF22P17026 224 aaPredicted RBP10.57□□□□□ -0.72
HMG20B-212ENST00000487894 C9orf129Q5T035 196 aaKnown RBP10.57□□□□□ -0.72
HMG20B-212ENST00000487894 COLCA2A8K830 154 aa10.56□□□□□ -0.72
HMG20B-212ENST00000487894 H3BRM9 83 aa10.56□□□□□ -0.72
HMG20B-212ENST00000487894 FAM19A5Q7Z5A7 132 aaPredicted RBP10.56□□□□□ -0.72
HMG20B-212ENST00000487894 KRTAP7-1Q8IUC3 87 aa10.56□□□□□ -0.72
HMG20B-212ENST00000487894 BAGE3Q86Y29 109 aa10.55□□□□□ -0.72
HMG20B-212ENST00000487894 IGLV5-39A0A0G2JS06 123 aa10.54□□□□□ -0.72
HMG20B-212ENST00000487894 C11orf86A6NJI1 115 aa10.54□□□□□ -0.72
HMG20B-212ENST00000487894 LINC00310P59036 64 aa10.54□□□□□ -0.72
HMG20B-212ENST00000487894 HSBP1O75506 76 aa10.53□□□□□ -0.72
HMG20B-212ENST00000487894 FAM19A2Q8N3H0 131 aa10.53□□□□□ -0.72
HMG20B-212ENST00000487894 IFI27L1Q96BM0 104 aa10.53□□□□□ -0.72
HMG20B-212ENST00000487894 PSORS1C2Q9UIG4 136 aa10.53□□□□□ -0.72
HMG20B-212ENST00000487894 S100A1P23297 94 aa10.52□□□□□ -0.73
HMG20B-212ENST00000487894 CHTOPQ9Y3Y2 248 aaKnown RBP10.52□□□□□ -0.73
HMG20B-212ENST00000487894 TRAV12-1A0A0B4J245 112 aa10.51□□□□□ -0.73
HMG20B-212ENST00000487894 M0QXV9 152 aa10.51□□□□□ -0.73
HMG20B-212ENST00000487894 SERF1AO75920 110 aa10.51□□□□□ -0.73
HMG20B-212ENST00000487894 KRTAP11-1Q8IUC1 163 aa10.51□□□□□ -0.73
HMG20B-212ENST00000487894 SCO1O75880 301 aa10.5□□□□□ -0.73
HMG20B-212ENST00000487894 XAGE1AQ9HD64 81 aa10.5□□□□□ -0.73
HMG20B-212ENST00000487894 SRSF9Q13242 221 aaKnown RBP eCLIP10.49□□□□□ -0.73
HMG20B-212ENST00000487894 TMEM170BQ5T4T1 132 aa10.49□□□□□ -0.73
HMG20B-212ENST00000487894 SERTAD4-AS1Q5TG53 156 aa10.49□□□□□ -0.73
HMG20B-212ENST00000487894 TNXBP22105 4242 aa10.48□□□□□ -0.73
HMG20B-212ENST00000487894 SPINK6Q6UWN8 80 aa10.48□□□□□ -0.73
HMG20B-212ENST00000487894 NUPR1O60356 82 aa10.47□□□□□ -0.73
HMG20B-212ENST00000487894 ATP6V1G1O75348 118 aa10.47□□□□□ -0.73
HMG20B-212ENST00000487894 MT1HL1P0DM35 61 aa10.47□□□□□ -0.73
HMG20B-212ENST00000487894 C1orf137Q5JT78 98 aa10.47□□□□□ -0.73
HMG20B-212ENST00000487894 H3BS24 57 aa10.46□□□□□ -0.73
HMG20B-212ENST00000487894 TMEM223A0PJW6 202 aa10.45□□□□□ -0.74
HMG20B-212ENST00000487894 LEPROTL1O95214 131 aa10.45□□□□□ -0.74
HMG20B-212ENST00000487894 UBE2BP63146 152 aa10.44□□□□□ -0.74
HMG20B-212ENST00000487894 C22orf24Q9Y442 160 aa10.44□□□□□ -0.74
HMG20B-212ENST00000487894 H0Y8G0 127 aa10.42□□□□□ -0.74
HMG20B-212ENST00000487894 IGLV7-43P04211 117 aa10.42□□□□□ -0.74
HMG20B-212ENST00000487894 ZNF625Q96I27 306 aaPredicted RBP10.42□□□□□ -0.74
HMG20B-212ENST00000487894 ERG28Q9UKR5 140 aa10.42□□□□□ -0.74
HMG20B-212ENST00000487894 PFN2P35080 140 aa10.41□□□□□ -0.74
HMG20B-212ENST00000487894 SFTA2Q6UW10 78 aa10.41□□□□□ -0.74
HMG20B-212ENST00000487894 LINC01600Q96MT4 127 aa10.41□□□□□ -0.74
HMG20B-212ENST00000487894 TP73-AS1Q9UF72 201 aa10.41□□□□□ -0.74
HMG20B-212ENST00000487894 PLA2G2DQ9UNK4 145 aa10.41□□□□□ -0.74
HMG20B-212ENST00000487894 HIST1H2BKO60814 126 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 HIST1H2BJP06899 126 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 FABP4P15090 132 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 HIST1H2BOP23527 126 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 HIST1H2BBP33778 126 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 HIST1H2BDP58876 126 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 HIST1H2BCP62807 126 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 HIST2H2BEQ16778 126 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.4□□□□□ -0.74
HMG20B-212ENST00000487894 REG3GQ6UW15 175 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms