RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 C2orf88Q9BSF0 95 aa7.73□□□□□ -1.17
SREBF1-215ENST00000487401 A0A0J9YXV3 536 aa7.72□□□□□ -1.17
SREBF1-215ENST00000487401 C9orf116Q5BN46 136 aaPredicted RBP7.72□□□□□ -1.17
SREBF1-215ENST00000487401 C18orf32Q8TCD1 76 aa7.72□□□□□ -1.17
SREBF1-215ENST00000487401 PRELID3AQ96N28 172 aa7.72□□□□□ -1.17
SREBF1-215ENST00000487401 ALKBH7Q9BT30 221 aaPredicted RBP7.72□□□□□ -1.17
SREBF1-215ENST00000487401 IGHV3OR16-9A0A0B4J2B5 98 aa7.71□□□□□ -1.18
SREBF1-215ENST00000487401 IFI27P40305 119 aaPredicted RBP7.71□□□□□ -1.18
SREBF1-215ENST00000487401 SRSF9Q13242 221 aaKnown RBP eCLIP7.71□□□□□ -1.18
SREBF1-215ENST00000487401 FAM104AQ969W3 186 aa7.71□□□□□ -1.18
SREBF1-215ENST00000487401 MRPL35Q9NZE8 188 aaKnown RBP7.71□□□□□ -1.18
SREBF1-215ENST00000487401 NDUFA1O15239 70 aa7.7□□□□□ -1.18
SREBF1-215ENST00000487401 LOC389332A0A1B0GUA5 103 aa7.69□□□□□ -1.18
SREBF1-215ENST00000487401 KRTDAPP60985 99 aa7.69□□□□□ -1.18
SREBF1-215ENST00000487401 VAMP8Q9BV40 100 aa7.69□□□□□ -1.18
SREBF1-215ENST00000487401 PYGO1Q9Y3Y4 419 aa7.69□□□□□ -1.18
SREBF1-215ENST00000487401 KRTAP10-8P60410 259 aa7.68□□□□□ -1.18
SREBF1-215ENST00000487401 UNQ6190/PRO20217Q6UXQ8 127 aa7.68□□□□□ -1.18
SREBF1-215ENST00000487401 PHF5AQ7RTV0 110 aaKnown RBP7.68□□□□□ -1.18
SREBF1-215ENST00000487401 MIEN1Q9BRT3 115 aa7.68□□□□□ -1.18
SREBF1-215ENST00000487401 MAP1LC3AQ9H492 121 aa7.68□□□□□ -1.18
SREBF1-215ENST00000487401 PSORS1C2Q9UIG4 136 aa7.68□□□□□ -1.18
SREBF1-215ENST00000487401 LAMTOR2Q9Y2Q5 125 aa7.68□□□□□ -1.18
SREBF1-215ENST00000487401 IGLV4-3A0A075B6K6 122 aa7.67□□□□□ -1.18
SREBF1-215ENST00000487401 M0R143 59 aa7.67□□□□□ -1.18
SREBF1-215ENST00000487401 HSBP1O75506 76 aa7.67□□□□□ -1.18
SREBF1-215ENST00000487401 C3orf79P0CE67 100 aa7.67□□□□□ -1.18
SREBF1-215ENST00000487401 C1orf137Q5JT78 98 aa7.67□□□□□ -1.18
SREBF1-215ENST00000487401 C10orf25Q5T742 122 aa7.67□□□□□ -1.18
SREBF1-215ENST00000487401 LINC00469Q8N7U9 141 aa7.67□□□□□ -1.18
SREBF1-215ENST00000487401 CHCHD1Q96BP2 118 aaKnown RBP7.67□□□□□ -1.18
SREBF1-215ENST00000487401 TMEM141Q96I45 108 aa7.67□□□□□ -1.18
SREBF1-215ENST00000487401 A0A087WZ39 114 aa7.66□□□□□ -1.18
SREBF1-215ENST00000487401 A0A1B0GV90 55 aa7.66□□□□□ -1.18
SREBF1-215ENST00000487401 PRSS47A8MTI9 375 aa7.66□□□□□ -1.18
SREBF1-215ENST00000487401 GAGE2EQ4V326 116 aa7.66□□□□□ -1.18
SREBF1-215ENST00000487401 LINC00242Q5T6M2 205 aa7.66□□□□□ -1.18
SREBF1-215ENST00000487401 Q6ZN92 141 aa7.66□□□□□ -1.18
SREBF1-215ENST00000487401 FAM19A2Q8N3H0 131 aa7.66□□□□□ -1.18
SREBF1-215ENST00000487401 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
SREBF1-215ENST00000487401 GAGE2DQ9UEU5 116 aa7.66□□□□□ -1.18
SREBF1-215ENST00000487401 CYSLTR1Q9Y271 337 aa7.66□□□□□ -1.18
SREBF1-215ENST00000487401 TLX1NBP0CAT3 122 aa7.65□□□□□ -1.18
SREBF1-215ENST00000487401 PMCHL1Q16048 86 aa7.65□□□□□ -1.18
SREBF1-215ENST00000487401 Q8N8P6 123 aa7.65□□□□□ -1.18
SREBF1-215ENST00000487401 URB1-AS1Q96HZ7 61 aa7.65□□□□□ -1.18
SREBF1-215ENST00000487401 SNHG12Q9BXW3 62 aa7.65□□□□□ -1.18
SREBF1-215ENST00000487401 VCX2Q9H322 139 aa7.65□□□□□ -1.18
SREBF1-215ENST00000487401 PAM16Q9Y3D7 125 aa7.65□□□□□ -1.18
SREBF1-215ENST00000487401 C20orf202A1L168 122 aa7.64□□□□□ -1.19
SREBF1-215ENST00000487401 KIAA0087Q14695 138 aa7.64□□□□□ -1.19
SREBF1-215ENST00000487401 ODF1Q14990 250 aa7.64□□□□□ -1.19
SREBF1-215ENST00000487401 ORMDL2Q53FV1 153 aa7.64□□□□□ -1.19
SREBF1-215ENST00000487401 C2orf66Q6UXQ4 117 aa7.64□□□□□ -1.19
SREBF1-215ENST00000487401 FAM19A5Q7Z5A7 132 aaPredicted RBP7.64□□□□□ -1.19
SREBF1-215ENST00000487401 FAM168BA1KXE4 195 aa7.63□□□□□ -1.19
SREBF1-215ENST00000487401 UBE2D1P51668 147 aa7.63□□□□□ -1.19
SREBF1-215ENST00000487401 LINC01561Q8N1V8 128 aa7.63□□□□□ -1.19
SREBF1-215ENST00000487401 TRBV30A0A0K0K1B3 111 aa7.62□□□□□ -1.19
SREBF1-215ENST00000487401 PRSS2P07478 247 aa7.62□□□□□ -1.19
SREBF1-215ENST00000487401 LINC00614P0C842 121 aa7.62□□□□□ -1.19
SREBF1-215ENST00000487401 SPATA45Q537H7 98 aa7.62□□□□□ -1.19
SREBF1-215ENST00000487401 ZC2HC1BQ5TFG8 222 aa7.62□□□□□ -1.19
SREBF1-215ENST00000487401 C2orf82Q6UX34 121 aa7.62□□□□□ -1.19
SREBF1-215ENST00000487401 DIRC1Q969H9 104 aa7.62□□□□□ -1.19
SREBF1-215ENST00000487401 UQCR10Q9UDW1 63 aa7.62□□□□□ -1.19
SREBF1-215ENST00000487401 LRP2P98164 4655 aa7.62□□□□□ -1.19
SREBF1-215ENST00000487401 K7EMI3 77 aa7.61□□□□□ -1.19
SREBF1-215ENST00000487401 IGLV7-43P04211 117 aa7.61□□□□□ -1.19
SREBF1-215ENST00000487401 NPSP0C0P6 89 aa7.61□□□□□ -1.19
SREBF1-215ENST00000487401 IGLC3P0DOY3 106 aa7.61□□□□□ -1.19
SREBF1-215ENST00000487401 G0S2P27469 103 aa7.61□□□□□ -1.19
SREBF1-215ENST00000487401 CKS1BP61024 79 aa7.61□□□□□ -1.19
SREBF1-215ENST00000487401 UBE2BP63146 152 aa7.61□□□□□ -1.19
SREBF1-215ENST00000487401 AMELXQ99217 191 aa7.61□□□□□ -1.19
SREBF1-215ENST00000487401 NXT2Q9NPJ8 142 aaKnown RBP7.61□□□□□ -1.19
SREBF1-215ENST00000487401 NDUFC2-KCTD14E9PQ53 114 aa7.6□□□□□ -1.19
SREBF1-215ENST00000487401 C6orf226Q5I0X4 101 aa7.6□□□□□ -1.19
SREBF1-215ENST00000487401 PAPPA-AS1Q5QFB9 102 aa7.6□□□□□ -1.19
SREBF1-215ENST00000487401 TOMM7Q9P0U1 55 aa7.6□□□□□ -1.19
SREBF1-215ENST00000487401 IGIPA6NJ69 53 aa7.59□□□□□ -1.19
SREBF1-215ENST00000487401 M0QXV9 152 aa7.59□□□□□ -1.19
SREBF1-215ENST00000487401 SEC11AP67812 179 aa7.59□□□□□ -1.19
SREBF1-215ENST00000487401 PET117Q6UWS5 81 aa7.59□□□□□ -1.19
SREBF1-215ENST00000487401 HSPB8Q9UJY1 196 aa7.59□□□□□ -1.19
SREBF1-215ENST00000487401 SYS1-DBNDD2H3BUS1 97 aa7.58□□□□□ -1.2
SREBF1-215ENST00000487401 LEPROTL1O95214 131 aa7.58□□□□□ -1.2
SREBF1-215ENST00000487401 LINC00173Q6ZV60 143 aa7.58□□□□□ -1.2
SREBF1-215ENST00000487401 KRTAP11-1Q8IUC1 163 aa7.58□□□□□ -1.2
SREBF1-215ENST00000487401 GEMIN7Q9H840 131 aaKnown RBP7.58□□□□□ -1.2
SREBF1-215ENST00000487401 H0Y9J4 135 aa7.57□□□□□ -1.2
SREBF1-215ENST00000487401 HERVK_113P63121 156 aa7.57□□□□□ -1.2
SREBF1-215ENST00000487401 C9orf129Q5T035 196 aaKnown RBP7.57□□□□□ -1.2
SREBF1-215ENST00000487401 FA2HQ7L5A8 372 aa7.57□□□□□ -1.2
SREBF1-215ENST00000487401 MAP1LC3CQ9BXW4 147 aa7.57□□□□□ -1.2
SREBF1-215ENST00000487401 FAM19A3Q7Z5A8 133 aa7.56□□□□□ -1.2
SREBF1-215ENST00000487401 KRTAP7-1Q8IUC3 87 aa7.56□□□□□ -1.2
SREBF1-215ENST00000487401 Q8IZM0 81 aa7.56□□□□□ -1.2
SREBF1-215ENST00000487401 PRR26Q8N8Z3 221 aa7.56□□□□□ -1.2
SREBF1-215ENST00000487401 TOMM6Q96B49 74 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms