RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 FDCSPQ8NFU4 85 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 LINC01600Q96MT4 127 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 PRO1933Q9H354 126 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 MRC2Q9UBG0 1479 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 HECTD1Q9ULT8 2610 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 NEBP20929 6669 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 UBR4Q5T4S7 5183 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 KIAA1551Q9HCM1 1747 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 LAMA1P25391 3075 aa-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 SPTBN4Q9H254 2564 aa-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 DOPEY1Q5JWR5 2465 aa-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 APOBP04114 4563 aaKnown RBP-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 TRANK1O15050 2925 aa-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 ADGRL2O95490 1459 aa-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 LOC105371267A0A1B0GV96 52 aa-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 GNG7O60262 68 aa-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 ARL2-SNX15V9GYD0 113 aa-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 USP9YO00507 2555 aaPredicted RBP-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 MARF1Q9Y4F3 1742 aaKnown RBP-0.39□□□□□ -2.47
ERCC8-206ENST00000484330 AKAP13Q12802 2813 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 NKTRP30414 1462 aaKnown RBP-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 PLEKHH2Q8IVE3 1493 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 NLRP1Q9C000 1473 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 LRRC37AA6NMS7 1700 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 NALCNQ8IZF0 1738 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 UBE2L5PA0A1B0GUS4 154 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 F6UZH7 168 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 COX6CP09669 75 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 UBE2D3P61077 147 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 UBE2D2P62837 147 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 UBE2L3P68036 154 aaKnown RBP-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 LINC00474Q9P2X8 69 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 APLNQ9ULZ1 77 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 RYR3Q15413 4870 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 DNAH1Q9P2D7 4330 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 EDC4Q6P2E9 1401 aaKnown RBP-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 DNAH11Q96DT5 4516 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 TEP1Q99973 2627 aaKnown RBP-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 TOPAZ1Q8N9V7 1692 aa-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 PRRC2CQ9Y520 2896 aaKnown RBP-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 LAMA2P24043 3122 aaKnown RBP-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 SONP18583 2426 aaKnown RBP-0.4□□□□□ -2.47
ERCC8-206ENST00000484330 MYOM2P54296 1465 aa-0.41□□□□□ -2.47
ERCC8-206ENST00000484330 PDCD11Q14690 1871 aaKnown RBP-0.41□□□□□ -2.47
ERCC8-206ENST00000484330 MAPKBP1O60336 1514 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 A0A1B0GWA3 101 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 CPSF4LA6NMK7 179 aaKnown RBP-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 NDUFA2O43678 99 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 AKAIN1P0CW23 69 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 TRAPPC2P0DI81 140 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 TRAPPC2BP0DI82 140 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 SAA2P0DJI9 122 aaPredicted RBP-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 GNG11P61952 73 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 SEC11AP67812 179 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 Q0VG73 95 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 DEFB112Q30KQ8 113 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 CCDC58Q4VC31 144 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 C9orf153Q5TBE3 101 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 C9orf62Q8N4C0 152 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 C1orf54Q8WWF1 131 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 LCN9Q8WX39 176 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 SPRR2FQ96RM1 72 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 TSC22D3Q99576 134 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 MANBALQ9NQG1 85 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 LINC00846Q9NV44 126 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 ZZEF1O43149 2961 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 SCAPERQ9BY12 1400 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 ADAMTS12P58397 1594 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 NRKQ7Z2Y5 1582 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 NBASA2RRP1 2371 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 CHD1O14646 1710 aa-0.41□□□□□ -2.48
ERCC8-206ENST00000484330 SPG11Q96JI7 2443 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 TARBP1Q13395 1621 aaKnown RBP-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 PTPN23Q9H3S7 1636 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 DNAH8Q96JB1 4490 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 COL14A1Q05707 1796 aaKnown RBP-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 LYSTQ99698 3801 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 EPPK1P58107 5090 aaKnown RBP-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 ARHGAP5Q13017 1502 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 CUBNO60494 3623 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 COL4A6Q14031 1691 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 SHPRHQ149N8 1683 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 LOC100130705A0A1B0GUX0 176 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 NAP1L6A6NFF2 107 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 FAM24AA6NFZ4 105 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 FAM223BA6NKX1 122 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 OOSP1A8MZH6 123 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 K7EP13 123 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 MT1AP04731 61 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 H1FX-AS1Q4G0G2 97 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 PP6455Q8WZ26 134 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 C12orf57Q99622 126 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 PRO1854Q9UHT4 67 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 EIF4G3O43432 1585 aaKnown RBP-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 SPHKAPQ2M3C7 1700 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 SACSQ9NZJ4 4579 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 CC2D2AQ9P2K1 1620 aa-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 FASNP49327 2511 aaKnown RBP-0.42□□□□□ -2.48
ERCC8-206ENST00000484330 VPS13BQ7Z7G8 4022 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms