RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 LINC00482Q8N8I6 264 aa13.7□□□□□ -0.22
LIMS2-215ENST00000484252 H0YGX0 51 aa13.7□□□□□ -0.22
LIMS2-215ENST00000484252 INAFM2P0DMQ5 153 aa13.7□□□□□ -0.22
LIMS2-215ENST00000484252 SMIM11BQ8TCY0 68 aa13.69□□□□□ -0.22
LIMS2-215ENST00000484252 PRO0255Q9UI72 69 aa13.69□□□□□ -0.22
LIMS2-215ENST00000484252 SETXQ7Z333 2677 aaKnown RBP13.69□□□□□ -0.22
LIMS2-215ENST00000484252 ITPR2Q14571 2701 aa13.69□□□□□ -0.22
LIMS2-215ENST00000484252 C6orf226Q5I0X4 101 aa13.68□□□□□ -0.22
LIMS2-215ENST00000484252 C22orf24Q9Y442 160 aa13.68□□□□□ -0.22
LIMS2-215ENST00000484252 J3KT08 172 aa13.68□□□□□ -0.22
LIMS2-215ENST00000484252 MALP21145 153 aa13.68□□□□□ -0.22
LIMS2-215ENST00000484252 C3orf56Q8N813 242 aa13.68□□□□□ -0.22
LIMS2-215ENST00000484252 X6R8D5 127 aa13.68□□□□□ -0.22
LIMS2-215ENST00000484252 SETD2Q9BYW2 2564 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-215ENST00000484252 PFN2P35080 140 aa13.67□□□□□ -0.22
LIMS2-215ENST00000484252 Q8IZM0 81 aa13.67□□□□□ -0.22
LIMS2-215ENST00000484252 NOTCH3Q9UM47 2321 aa13.66□□□□□ -0.22
LIMS2-215ENST00000484252 DNAL4O96015 105 aa13.66□□□□□ -0.22
LIMS2-215ENST00000484252 COX7CP15954 63 aa13.66□□□□□ -0.22
LIMS2-215ENST00000484252 KRTAP10-3P60369 221 aa13.66□□□□□ -0.22
LIMS2-215ENST00000484252 RPS28P62857 69 aaKnown RBP13.65□□□□□ -0.22
LIMS2-215ENST00000484252 C5orf47Q569G3 176 aa13.65□□□□□ -0.22
LIMS2-215ENST00000484252 SMCR5Q8TEV8 140 aa13.65□□□□□ -0.22
LIMS2-215ENST00000484252 NIPBLQ6KC79 2804 aaeCLIP13.65□□□□□ -0.22
LIMS2-215ENST00000484252 MTORP42345 2549 aa13.65□□□□□ -0.22
LIMS2-215ENST00000484252 LYRM9A8MSI8 78 aa13.65□□□□□ -0.22
LIMS2-215ENST00000484252 PAX4O43316 350 aa13.65□□□□□ -0.22
LIMS2-215ENST00000484252 XCL1P47992 114 aa13.65□□□□□ -0.22
LIMS2-215ENST00000484252 Q9HAA7 133 aa13.65□□□□□ -0.22
LIMS2-215ENST00000484252 CRYGAP11844 174 aa13.63□□□□□ -0.23
LIMS2-215ENST00000484252 KMT2BQ9UMN6 2715 aaPredicted RBP13.63□□□□□ -0.23
LIMS2-215ENST00000484252 ATOX1O00244 68 aa13.63□□□□□ -0.23
LIMS2-215ENST00000484252 LY6G6DO95868 133 aa13.62□□□□□ -0.23
LIMS2-215ENST00000484252 A0A087WYN8 130 aa13.62□□□□□ -0.23
LIMS2-215ENST00000484252 JMJD1CQ15652 2540 aa13.61□□□□□ -0.23
LIMS2-215ENST00000484252 HELZ2Q9BYK8 2649 aaKnown RBP13.61□□□□□ -0.23
LIMS2-215ENST00000484252 C2CD3Q4AC94 2353 aa13.6□□□□□ -0.23
LIMS2-215ENST00000484252 UNC79Q9P2D8 2635 aa13.6□□□□□ -0.23
LIMS2-215ENST00000484252 C9orf66Q5T8R8 295 aa13.6□□□□□ -0.23
LIMS2-215ENST00000484252 GAGE2AQ6NT46 116 aa13.6□□□□□ -0.23
LIMS2-215ENST00000484252 OR13C6PQ8NH95 151 aa13.6□□□□□ -0.23
LIMS2-215ENST00000484252 C11orf68Q9H3H3 251 aaKnown RBP13.6□□□□□ -0.23
LIMS2-215ENST00000484252 HIST1H4AP62805 103 aaKnown RBP13.59□□□□□ -0.23
LIMS2-215ENST00000484252 SMR3AQ99954 134 aa13.59□□□□□ -0.23
LIMS2-215ENST00000484252 CD164L2Q6UWJ8 174 aa13.57□□□□□ -0.24
LIMS2-215ENST00000484252 COX17Q14061 63 aa13.57□□□□□ -0.24
LIMS2-215ENST00000484252 C2orf48Q96LS8 159 aa13.57□□□□□ -0.24
LIMS2-215ENST00000484252 CLPSL2Q6UWE3 100 aa13.56□□□□□ -0.24
LIMS2-215ENST00000484252 A0A096LPF7 62 aa13.55□□□□□ -0.24
LIMS2-215ENST00000484252 OBSCN-AS1Q96MR7 158 aa13.55□□□□□ -0.24
LIMS2-215ENST00000484252 LECT2O14960 151 aa13.55□□□□□ -0.24
LIMS2-215ENST00000484252 NDUFC2O95298 119 aa13.54□□□□□ -0.24
LIMS2-215ENST00000484252 APOC4P55056 127 aa13.54□□□□□ -0.24
LIMS2-215ENST00000484252 LINC00269Q8N2A0 174 aa13.54□□□□□ -0.24
LIMS2-215ENST00000484252 LOC107984640A0A0U1RRK4 108 aa13.54□□□□□ -0.24
LIMS2-215ENST00000484252 KIAA0087Q14695 138 aa13.54□□□□□ -0.24
LIMS2-215ENST00000484252 FAM19A5Q7Z5A7 132 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-215ENST00000484252 CHCHD10Q8WYQ3 142 aaPredicted RBP13.52□□□□□ -0.24
LIMS2-215ENST00000484252 IGHV4-28A0A0C4DH34 117 aa13.52□□□□□ -0.25
LIMS2-215ENST00000484252 DAD1P61803 113 aa13.51□□□□□ -0.25
LIMS2-215ENST00000484252 DEFB135Q30KP9 77 aa13.51□□□□□ -0.25
LIMS2-215ENST00000484252 FASNP49327 2511 aaKnown RBP13.51□□□□□ -0.25
LIMS2-215ENST00000484252 TMEM258P61165 79 aa13.51□□□□□ -0.25
LIMS2-215ENST00000484252 RPL18AQ02543 176 aaKnown RBP13.51□□□□□ -0.25
LIMS2-215ENST00000484252 REG3AQ06141 175 aa13.51□□□□□ -0.25
LIMS2-215ENST00000484252 ORMDL1Q9P0S3 153 aa13.51□□□□□ -0.25
LIMS2-215ENST00000484252 HIVEP2P31629 2446 aa13.5□□□□□ -0.25
LIMS2-215ENST00000484252 ANGP03950 147 aaKnown RBP13.5□□□□□ -0.25
LIMS2-215ENST00000484252 KLK5Q9Y337 293 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-215ENST00000484252 LINC00167Q96N53 147 aa13.49□□□□□ -0.25
LIMS2-215ENST00000484252 C14orf132Q9NPU4 83 aa13.48□□□□□ -0.25
LIMS2-215ENST00000484252 WIPF1O43516 503 aa13.47□□□□□ -0.25
LIMS2-215ENST00000484252 MIFP14174 115 aa13.47□□□□□ -0.25
LIMS2-215ENST00000484252 C9orf129Q5T035 196 aaKnown RBP13.47□□□□□ -0.25
LIMS2-215ENST00000484252 Q6JHZ5 121 aa13.47□□□□□ -0.25
LIMS2-215ENST00000484252 DEFB4AO15263 64 aa13.46□□□□□ -0.25
LIMS2-215ENST00000484252 NANOS2P60321 138 aaKnown RBP13.46□□□□□ -0.25
LIMS2-215ENST00000484252 SERP2Q8N6R1 65 aa13.46□□□□□ -0.25
LIMS2-215ENST00000484252 MUC7Q8TAX7 377 aa13.46□□□□□ -0.25
LIMS2-215ENST00000484252 hADV29S1A0JD25 119 aa13.46□□□□□ -0.26
LIMS2-215ENST00000484252 SPATA3Q8NHX4 192 aa13.46□□□□□ -0.26
LIMS2-215ENST00000484252 IGLV10-54A0A075B6I4 117 aa13.44□□□□□ -0.26
LIMS2-215ENST00000484252 Q8NAQ8 132 aa13.44□□□□□ -0.26
LIMS2-215ENST00000484252 SLPIP03973 132 aa13.44□□□□□ -0.26
LIMS2-215ENST00000484252 LELP1Q5T871 98 aa13.43□□□□□ -0.26
LIMS2-215ENST00000484252 Q8N814 137 aa13.43□□□□□ -0.26
LIMS2-215ENST00000484252 NCR3O14931 201 aa13.43□□□□□ -0.26
LIMS2-215ENST00000484252 SPART-AS1P0CW21 52 aa13.43□□□□□ -0.26
LIMS2-215ENST00000484252 PRR3P79522 188 aaKnown RBP13.42□□□□□ -0.26
LIMS2-215ENST00000484252 Q8N3U1 123 aa13.42□□□□□ -0.26
LIMS2-215ENST00000484252 DPH3Q96FX2 82 aa13.42□□□□□ -0.26
LIMS2-215ENST00000484252 CELA1Q9UNI1 258 aa13.41□□□□□ -0.26
LIMS2-215ENST00000484252 JMJD7-PLA2G4BH0Y9G9 81 aa13.41□□□□□ -0.26
LIMS2-215ENST00000484252 GCN1Q92616 2671 aaKnown RBP13.4□□□□□ -0.26
LIMS2-215ENST00000484252 TMEM256-PLSCR3K7ERE1 68 aa13.4□□□□□ -0.26
LIMS2-215ENST00000484252 SPAG11BQ08648 103 aa13.38□□□□□ -0.27
LIMS2-215ENST00000484252 C9orf116Q5BN46 136 aaPredicted RBP13.38□□□□□ -0.27
LIMS2-215ENST00000484252 UPK3BQ9BT76 320 aa13.38□□□□□ -0.27
LIMS2-215ENST00000484252 LINC00846Q9NV44 126 aa13.38□□□□□ -0.27
LIMS2-215ENST00000484252 CCKP06307 115 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms