RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TRAV10A0A0B4J240 114 aa8.16□□□□□ -1.1
SEC61A1-205ENST00000483956 INSP01308 110 aa8.16□□□□□ -1.1
SEC61A1-205ENST00000483956 FAM229BQ4G0N7 80 aa8.16□□□□□ -1.1
SEC61A1-205ENST00000483956 CREBBPQ92793 2442 aa8.16□□□□□ -1.1
SEC61A1-205ENST00000483956 SLURP1P55000 103 aa8.16□□□□□ -1.1
SEC61A1-205ENST00000483956 MAP6D1Q9H9H5 199 aa8.16□□□□□ -1.1
SEC61A1-205ENST00000483956 TRBV10-3A0A0K0K1G6 114 aa8.14□□□□□ -1.11
SEC61A1-205ENST00000483956 HELZ2Q9BYK8 2649 aaKnown RBP8.14□□□□□ -1.11
SEC61A1-205ENST00000483956 Q6YL49 198 aa8.14□□□□□ -1.11
SEC61A1-205ENST00000483956 UBL5Q9BZL1 73 aa8.14□□□□□ -1.11
SEC61A1-205ENST00000483956 A0A096LNT2 108 aa8.13□□□□□ -1.11
SEC61A1-205ENST00000483956 Q6ZTI0 123 aa8.13□□□□□ -1.11
SEC61A1-205ENST00000483956 FSHBP01225 129 aa8.13□□□□□ -1.11
SEC61A1-205ENST00000483956 DEFB136Q30KP8 78 aa8.13□□□□□ -1.11
SEC61A1-205ENST00000483956 HECTD1Q9ULT8 2610 aa8.13□□□□□ -1.11
SEC61A1-205ENST00000483956 TRBV10-1A0A0K0K1A3 114 aa8.12□□□□□ -1.11
SEC61A1-205ENST00000483956 C18orf65Q6ZTR6 163 aa8.12□□□□□ -1.11
SEC61A1-205ENST00000483956 C4orf3Q8WVX3 66 aa8.11□□□□□ -1.11
SEC61A1-205ENST00000483956 DOPEY1Q5JWR5 2465 aa8.11□□□□□ -1.11
SEC61A1-205ENST00000483956 CCL18P55774 89 aa8.11□□□□□ -1.11
SEC61A1-205ENST00000483956 Q96MF0 132 aa8.11□□□□□ -1.11
SEC61A1-205ENST00000483956 BCE1O60756 84 aa8.1□□□□□ -1.11
SEC61A1-205ENST00000483956 DEFB114Q30KQ6 69 aa8.1□□□□□ -1.11
SEC61A1-205ENST00000483956 DYNLRB2Q8TF09 96 aa8.1□□□□□ -1.11
SEC61A1-205ENST00000483956 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
SEC61A1-205ENST00000483956 JMJD7-PLA2G4BH0Y9G9 81 aa8.1□□□□□ -1.11
SEC61A1-205ENST00000483956 K7EQD1 137 aa8.1□□□□□ -1.11
SEC61A1-205ENST00000483956 NTM-AS1Q6ZSK4 140 aa8.1□□□□□ -1.11
SEC61A1-205ENST00000483956 ZANQ9Y493 2812 aa8.09□□□□□ -1.11
SEC61A1-205ENST00000483956 LINC00158P58513 81 aa8.09□□□□□ -1.11
SEC61A1-205ENST00000483956 RNASE1P07998 156 aaKnown RBP8.09□□□□□ -1.11
SEC61A1-205ENST00000483956 PMAIP1Q13794 54 aa8.08□□□□□ -1.12
SEC61A1-205ENST00000483956 TM2D3Q9BRN9 247 aa8.08□□□□□ -1.12
SEC61A1-205ENST00000483956 TRGV1A0A0A0MS02 117 aa8.08□□□□□ -1.12
SEC61A1-205ENST00000483956 C1orf158Q8N1D5 194 aa8.08□□□□□ -1.12
SEC61A1-205ENST00000483956 NBPF19A0A087WUL8 3843 aa8.08□□□□□ -1.12
SEC61A1-205ENST00000483956 HAMPP81172 84 aa8.08□□□□□ -1.12
SEC61A1-205ENST00000483956 BBC3Q96PG8 261 aaPredicted RBP8.08□□□□□ -1.12
SEC61A1-205ENST00000483956 TOMM7Q9P0U1 55 aa8.08□□□□□ -1.12
SEC61A1-205ENST00000483956 MXRA5Q9NR99 2828 aa8.08□□□□□ -1.12
SEC61A1-205ENST00000483956 PAX4O43316 350 aa8.07□□□□□ -1.12
SEC61A1-205ENST00000483956 NDUFC1O43677 76 aa8.07□□□□□ -1.12
SEC61A1-205ENST00000483956 MIFP14174 115 aa8.07□□□□□ -1.12
SEC61A1-205ENST00000483956 LINC01547P58512 204 aaPredicted RBP8.07□□□□□ -1.12
SEC61A1-205ENST00000483956 SONP18583 2426 aaKnown RBP8.07□□□□□ -1.12
SEC61A1-205ENST00000483956 CUBNO60494 3623 aa8.07□□□□□ -1.12
SEC61A1-205ENST00000483956 ATP5EP56381 51 aaPredicted RBP8.07□□□□□ -1.12
SEC61A1-205ENST00000483956 ODF3L2Q3SX64 289 aa8.07□□□□□ -1.12
SEC61A1-205ENST00000483956 FLNBO75369 2602 aaKnown RBP8.06□□□□□ -1.12
SEC61A1-205ENST00000483956 TRBV7-4A0A0J9YYF1 115 aa8.06□□□□□ -1.12
SEC61A1-205ENST00000483956 M0R2N4 97 aa8.06□□□□□ -1.12
SEC61A1-205ENST00000483956 A0A1W2PRX2 142 aa8.05□□□□□ -1.12
SEC61A1-205ENST00000483956 TENM4Q6N022 2769 aa8.05□□□□□ -1.12
SEC61A1-205ENST00000483956 STHQ8IWL8 128 aa8.05□□□□□ -1.12
SEC61A1-205ENST00000483956 LINC00167Q96N53 147 aa8.05□□□□□ -1.12
SEC61A1-205ENST00000483956 SETD2Q9BYW2 2564 aaPredicted RBP8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 NAV2Q8IVL1 2488 aa8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 A0A087WZ39 114 aa8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 Q8N3U1 123 aa8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 COX7B2Q8TF08 81 aa8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 ANKRD17O75179 2603 aaKnown RBP8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 GCN1Q92616 2671 aaKnown RBP8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 TMEM256-PLSCR3K7ERE1 68 aa8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 Q8N814 137 aa8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 MAPK1IP1LQ8NDC0 245 aa8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 ACANP16112 2415 aa8.04□□□□□ -1.12
SEC61A1-205ENST00000483956 UBE2L6O14933 153 aa8.03□□□□□ -1.12
SEC61A1-205ENST00000483956 IGHV4-31P0DP07 118 aa8.03□□□□□ -1.12
SEC61A1-205ENST00000483956 C6orf226Q5I0X4 101 aa8.03□□□□□ -1.12
SEC61A1-205ENST00000483956 IBA57-AS1B1ANH7 110 aa8.03□□□□□ -1.12
SEC61A1-205ENST00000483956 Q6ZVQ6 151 aa8.03□□□□□ -1.12
SEC61A1-205ENST00000483956 C11orf68Q9H3H3 251 aaKnown RBP8.03□□□□□ -1.12
SEC61A1-205ENST00000483956 KHDC1LQ5JSQ8 128 aa8.02□□□□□ -1.13
SEC61A1-205ENST00000483956 TRBV6-4A0A1B0GX49 114 aa8.02□□□□□ -1.13
SEC61A1-205ENST00000483956 ESRGQ1W209 222 aa8.02□□□□□ -1.13
SEC61A1-205ENST00000483956 PLAC8L1A1L4L8 177 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 Q6ZQT0 140 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 PRR15Q8IV56 129 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 TMEM254Q8TBM7 123 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 RETNQ9HD89 108 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 CR1P17927 2039 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 MYO9AB2RTY4 2548 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 LY6G6DO95868 133 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 C2CD3Q4AC94 2353 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 ITPR2Q14571 2701 aa8.01□□□□□ -1.13
SEC61A1-205ENST00000483956 NREPQ16612 68 aa8□□□□□ -1.13
SEC61A1-205ENST00000483956 ZNF843Q8N446 348 aa8□□□□□ -1.13
SEC61A1-205ENST00000483956 FBN2P35556 2912 aa8□□□□□ -1.13
SEC61A1-205ENST00000483956 AKAP9Q99996 3911 aa8□□□□□ -1.13
SEC61A1-205ENST00000483956 PLA2G2AP14555 144 aa8□□□□□ -1.13
SEC61A1-205ENST00000483956 NOP10Q9NPE3 64 aaKnown RBP7.99□□□□□ -1.13
SEC61A1-205ENST00000483956 IGKV3OR2-268A0A0C4DH90 116 aa7.99□□□□□ -1.13
SEC61A1-205ENST00000483956 PRR3P79522 188 aaKnown RBP7.99□□□□□ -1.13
SEC61A1-205ENST00000483956 Q6ZRU5 148 aa7.99□□□□□ -1.13
SEC61A1-205ENST00000483956 IGHV3OR16-9A0A0B4J2B5 98 aa7.98□□□□□ -1.13
SEC61A1-205ENST00000483956 C16orf74Q96GX8 76 aa7.98□□□□□ -1.13
SEC61A1-205ENST00000483956 NANOS2P60321 138 aaKnown RBP7.98□□□□□ -1.13
SEC61A1-205ENST00000483956 GIG44P09565 113 aaPredicted RBP7.97□□□□□ -1.13
SEC61A1-205ENST00000483956 MTORP42345 2549 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms