RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 IGHV1-58A0A0C4DH39 117 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 GGTLC3B5MD39 225 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 LYRM1O43325 122 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 IGKV2D-40P01614 121 aaPredicted RBP4.2□□□□□ -1.74
CLK1-212ENST00000482590 DNAH10OSP0CZ25 163 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 LGALS3P17931 250 aaKnown RBP4.2□□□□□ -1.74
CLK1-212ENST00000482590 CSN1S1P47710 185 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 Q5VSD8 79 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 TEX261Q6UWH6 196 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 ZFAND2AQ8N6M9 145 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 ZC2HC1AQ96GY0 325 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 NPCDR1Q9BY65 106 aa4.2□□□□□ -1.74
CLK1-212ENST00000482590 PSCAO43653 123 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 NMBP08949 121 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 S100A4P26447 101 aaKnown RBP4.19□□□□□ -1.74
CLK1-212ENST00000482590 NDUFA6P56556 154 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 PKIAP61925 76 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 SYCNQ0VAF6 134 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 MRPL51Q4U2R6 128 aaKnown RBP4.19□□□□□ -1.74
CLK1-212ENST00000482590 LINC01554Q52M75 96 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 C9orf129Q5T035 196 aaKnown RBP4.19□□□□□ -1.74
CLK1-212ENST00000482590 PRR9Q5T870 116 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 LYPD5Q6UWN5 251 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 WFDC10BQ8IUB3 73 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 LYPD1Q8N2G4 141 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 Q8TAT8 98 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 MRPL32Q9BYC8 188 aaKnown RBP4.19□□□□□ -1.74
CLK1-212ENST00000482590 AGPAT4-IT1Q9H0P7 198 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 TP53TG3Q9ULZ0 132 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 HHLA3Q9XRX5 114 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 VPS13BQ7Z7G8 4022 aa4.19□□□□□ -1.74
CLK1-212ENST00000482590 FLG2Q5D862 2391 aaPredicted RBP4.18□□□□□ -1.74
CLK1-212ENST00000482590 A0A087WTM6 91 aa4.18□□□□□ -1.74
CLK1-212ENST00000482590 C1orf196B1AJZ1 125 aa4.18□□□□□ -1.74
CLK1-212ENST00000482590 C17orf112F2Z3M2 114 aa4.18□□□□□ -1.74
CLK1-212ENST00000482590 SFTA3P0C7M3 94 aa4.18□□□□□ -1.74
CLK1-212ENST00000482590 FUSP35637 526 aaKnown RBP eCLIP4.18□□□□□ -1.74
CLK1-212ENST00000482590 UBE2L3P68036 154 aaKnown RBP4.18□□□□□ -1.74
CLK1-212ENST00000482590 MIR17HGQ75NE6 70 aa4.18□□□□□ -1.74
CLK1-212ENST00000482590 TXNDC17Q9BRA2 123 aa4.18□□□□□ -1.74
CLK1-212ENST00000482590 C11orf1Q9H5F2 150 aa4.18□□□□□ -1.74
CLK1-212ENST00000482590 XAGE1AQ9HD64 81 aa4.18□□□□□ -1.74
CLK1-212ENST00000482590 DNAH8Q96JB1 4490 aa4.17□□□□□ -1.74
CLK1-212ENST00000482590 TMEM223A0PJW6 202 aa4.17□□□□□ -1.74
CLK1-212ENST00000482590 RBAKDNA6NC62 111 aa4.17□□□□□ -1.74
CLK1-212ENST00000482590 TMEM256-PLSCR3K7ERE1 68 aa4.17□□□□□ -1.74
CLK1-212ENST00000482590 IGHV3-30-3P0DP02 117 aa4.17□□□□□ -1.74
CLK1-212ENST00000482590 TSPEAR-AS2P59090 65 aa4.17□□□□□ -1.74
CLK1-212ENST00000482590 UBE2BP63146 152 aa4.17□□□□□ -1.74
CLK1-212ENST00000482590 KHDC3LQ587J8 217 aa4.17□□□□□ -1.74
CLK1-212ENST00000482590 PHF5AQ7RTV0 110 aaKnown RBP4.17□□□□□ -1.74
CLK1-212ENST00000482590 M0R143 59 aa4.16□□□□□ -1.74
CLK1-212ENST00000482590 FABP2P12104 132 aa4.16□□□□□ -1.74
CLK1-212ENST00000482590 KRTAP10-1P60331 282 aa4.16□□□□□ -1.74
CLK1-212ENST00000482590 FAM74A1Q5RGS3 127 aa4.16□□□□□ -1.74
CLK1-212ENST00000482590 Q6AWC8 147 aa4.16□□□□□ -1.74
CLK1-212ENST00000482590 Q6ZQT7 251 aa4.16□□□□□ -1.74
CLK1-212ENST00000482590 SH2D6Q7Z4S9 175 aa4.16□□□□□ -1.74
CLK1-212ENST00000482590 FAM167A-AS1Q96KT0 104 aa4.16□□□□□ -1.74
CLK1-212ENST00000482590 TMEM191AQ9H0A3 160 aa4.16□□□□□ -1.74
CLK1-212ENST00000482590 SRRM2Q9UQ35 2752 aaKnown RBP4.16□□□□□ -1.74
CLK1-212ENST00000482590 M0R2P5 195 aa4.15□□□□□ -1.75
CLK1-212ENST00000482590 SMR3BP02814 79 aaPredicted RBP4.15□□□□□ -1.75
CLK1-212ENST00000482590 GNG4P50150 75 aa4.15□□□□□ -1.75
CLK1-212ENST00000482590 HIST1H4AP62805 103 aaKnown RBP4.15□□□□□ -1.75
CLK1-212ENST00000482590 EIF5AP63241 154 aaKnown RBP4.15□□□□□ -1.75
CLK1-212ENST00000482590 HIGD2BQ4VC39 106 aa4.15□□□□□ -1.75
CLK1-212ENST00000482590 ZC2HC1BQ5TFG8 222 aa4.15□□□□□ -1.75
CLK1-212ENST00000482590 CMTM2Q8TAZ6 248 aa4.15□□□□□ -1.75
CLK1-212ENST00000482590 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
CLK1-212ENST00000482590 HYLS1Q96M11 299 aa4.15□□□□□ -1.75
CLK1-212ENST00000482590 LENEPQ9Y5L5 61 aa4.15□□□□□ -1.75
CLK1-212ENST00000482590 TRAV13-1A0A0B4J241 112 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 TRAV21A0A0B4J279 112 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 A8MWP4 228 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 LEPROTO15243 131 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 CCL25O15444 150 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 SIX6O95475 246 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 CXCL1P09341 107 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 HAMPP81172 84 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 RHOHQ15669 191 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 ADM2Q7Z4H4 148 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 NMES1Q9C002 83 aa4.14□□□□□ -1.75
CLK1-212ENST00000482590 TMEM218A2RU14 115 aa4.13□□□□□ -1.75
CLK1-212ENST00000482590 ZNF727A8MUV8 499 aa4.13□□□□□ -1.75
CLK1-212ENST00000482590 H3BMG7 143 aa4.13□□□□□ -1.75
CLK1-212ENST00000482590 IGHV3-30P01768 117 aa4.13□□□□□ -1.75
CLK1-212ENST00000482590 IGHV3-33P01772 117 aa4.13□□□□□ -1.75
CLK1-212ENST00000482590 IGHV3-30-5P0DP03 117 aa4.13□□□□□ -1.75
CLK1-212ENST00000482590 FOXA3P55318 350 aaPredicted RBP4.13□□□□□ -1.75
CLK1-212ENST00000482590 HBBP68871 147 aa4.13□□□□□ -1.75
CLK1-212ENST00000482590 MEF2BQ02080 365 aaPredicted RBP4.13□□□□□ -1.75
CLK1-212ENST00000482590 TDRG1Q3Y452 100 aa4.13□□□□□ -1.75
CLK1-212ENST00000482590 LINC01556Q5JQF7 62 aa4.13□□□□□ -1.75
CLK1-212ENST00000482590 C10orf91Q5T1B1 145 aa4.13□□□□□ -1.75
CLK1-212ENST00000482590 FAM168BA1KXE4 195 aa4.12□□□□□ -1.75
CLK1-212ENST00000482590 IBA57-AS1B1ANH7 110 aa4.12□□□□□ -1.75
CLK1-212ENST00000482590 GNRH2O43555 120 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms