RNA–Protein interactions for RNA: ENST00000482396.5

SFMBT1-204, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 2

Gene SFMBT1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-204ENST00000482396 OXTP01178 125 aa12.32□□□□□ -0.44
SFMBT1-204ENST00000482396 PMVKQ15126 192 aa12.32□□□□□ -0.44
SFMBT1-204ENST00000482396 Q8IZM0 81 aa12.32□□□□□ -0.44
SFMBT1-204ENST00000482396 GEMIN7Q9H840 131 aaKnown RBP12.32□□□□□ -0.44
SFMBT1-204ENST00000482396 J3QL48 77 aa12.31□□□□□ -0.44
SFMBT1-204ENST00000482396 PMCHL1Q16048 86 aa12.31□□□□□ -0.44
SFMBT1-204ENST00000482396 PDZD11Q5EBL8 140 aa12.31□□□□□ -0.44
SFMBT1-204ENST00000482396 KRTAP7-1Q8IUC3 87 aa12.31□□□□□ -0.44
SFMBT1-204ENST00000482396 TOMM7Q9P0U1 55 aa12.31□□□□□ -0.44
SFMBT1-204ENST00000482396 FAM168BA1KXE4 195 aa12.3□□□□□ -0.44
SFMBT1-204ENST00000482396 SMIM1B2RUZ4 78 aa12.3□□□□□ -0.44
SFMBT1-204ENST00000482396 LINC00469Q8N7U9 141 aa12.29□□□□□ -0.44
SFMBT1-204ENST00000482396 HBDP02042 147 aa12.28□□□□□ -0.44
SFMBT1-204ENST00000482396 C6orf226Q5I0X4 101 aa12.28□□□□□ -0.44
SFMBT1-204ENST00000482396 PHF5AQ7RTV0 110 aaKnown RBP12.28□□□□□ -0.44
SFMBT1-204ENST00000482396 PRSS2P07478 247 aa12.27□□□□□ -0.45
SFMBT1-204ENST00000482396 GAGE2EQ4V326 116 aa12.27□□□□□ -0.45
SFMBT1-204ENST00000482396 GAGE2DQ9UEU5 116 aa12.27□□□□□ -0.45
SFMBT1-204ENST00000482396 NDUFC2-KCTD14E9PQ53 114 aa12.26□□□□□ -0.45
SFMBT1-204ENST00000482396 C9orf129Q5T035 196 aaKnown RBP12.26□□□□□ -0.45
SFMBT1-204ENST00000482396 PACRGQ96M98 296 aaPredicted RBP12.26□□□□□ -0.45
SFMBT1-204ENST00000482396 IGLC3P0DOY3 106 aa12.25□□□□□ -0.45
SFMBT1-204ENST00000482396 RAB5BP61020 215 aa12.25□□□□□ -0.45
SFMBT1-204ENST00000482396 SRSF9Q13242 221 aaKnown RBP eCLIP12.25□□□□□ -0.45
SFMBT1-204ENST00000482396 KRTAP11-1Q8IUC1 163 aa12.25□□□□□ -0.45
SFMBT1-204ENST00000482396 TNXBP22105 4242 aa12.25□□□□□ -0.45
SFMBT1-204ENST00000482396 SPINK8P0C7L1 97 aa12.24□□□□□ -0.45
SFMBT1-204ENST00000482396 MT1HL1P0DM35 61 aa12.24□□□□□ -0.45
SFMBT1-204ENST00000482396 CKS1BP61024 79 aa12.24□□□□□ -0.45
SFMBT1-204ENST00000482396 PSORS1C2Q9UIG4 136 aa12.23□□□□□ -0.45
SFMBT1-204ENST00000482396 F8VRH5 84 aa12.22□□□□□ -0.45
SFMBT1-204ENST00000482396 COX7B2Q8TF08 81 aa12.22□□□□□ -0.45
SFMBT1-204ENST00000482396 TRGC2P03986 189 aa12.21□□□□□ -0.45
SFMBT1-204ENST00000482396 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
SFMBT1-204ENST00000482396 FAM19A5Q7Z5A7 132 aaPredicted RBP12.21□□□□□ -0.45
SFMBT1-204ENST00000482396 CHCHD1Q96BP2 118 aaKnown RBP12.21□□□□□ -0.45
SFMBT1-204ENST00000482396 IGLV5-39A0A0G2JS06 123 aa12.2□□□□□ -0.46
SFMBT1-204ENST00000482396 ATP5LO75964 103 aa12.2□□□□□ -0.46
SFMBT1-204ENST00000482396 NDUFA6P56556 154 aa12.2□□□□□ -0.46
SFMBT1-204ENST00000482396 COLCA2A8K830 154 aa12.19□□□□□ -0.46
SFMBT1-204ENST00000482396 CXCL5P42830 114 aa12.19□□□□□ -0.46
SFMBT1-204ENST00000482396 C11orf86A6NJI1 115 aa12.18□□□□□ -0.46
SFMBT1-204ENST00000482396 LINC00310P59036 64 aa12.18□□□□□ -0.46
SFMBT1-204ENST00000482396 BAGE3Q86Y29 109 aa12.18□□□□□ -0.46
SFMBT1-204ENST00000482396 SERTAD4-AS1Q5TG53 156 aa12.17□□□□□ -0.46
SFMBT1-204ENST00000482396 SPINK6Q6UWN8 80 aa12.17□□□□□ -0.46
SFMBT1-204ENST00000482396 XAGE1AQ9HD64 81 aa12.16□□□□□ -0.46
SFMBT1-204ENST00000482396 H3BRM9 83 aa12.15□□□□□ -0.46
SFMBT1-204ENST00000482396 FAM19A2Q8N3H0 131 aa12.15□□□□□ -0.46
SFMBT1-204ENST00000482396 M0QXV9 152 aa12.14□□□□□ -0.47
SFMBT1-204ENST00000482396 C1orf137Q5JT78 98 aa12.13□□□□□ -0.47
SFMBT1-204ENST00000482396 IFI27L1Q96BM0 104 aa12.13□□□□□ -0.47
SFMBT1-204ENST00000482396 LINC01600Q96MT4 127 aa12.13□□□□□ -0.47
SFMBT1-204ENST00000482396 TRAV12-1A0A0B4J245 112 aa12.12□□□□□ -0.47
SFMBT1-204ENST00000482396 NUPR1O60356 82 aa12.12□□□□□ -0.47
SFMBT1-204ENST00000482396 CHTOPQ9Y3Y2 248 aaKnown RBP12.12□□□□□ -0.47
SFMBT1-204ENST00000482396 C22orf24Q9Y442 160 aa12.11□□□□□ -0.47
SFMBT1-204ENST00000482396 HMCN2Q8NDA2 5059 aa12.11□□□□□ -0.47
SFMBT1-204ENST00000482396 HSBP1O75506 76 aa12.1□□□□□ -0.47
SFMBT1-204ENST00000482396 SERF1AO75920 110 aa12.1□□□□□ -0.47
SFMBT1-204ENST00000482396 SCO1O75880 301 aa12.09□□□□□ -0.47
SFMBT1-204ENST00000482396 IGLV7-43P04211 117 aa12.09□□□□□ -0.47
SFMBT1-204ENST00000482396 TMEM170BQ5T4T1 132 aa12.09□□□□□ -0.47
SFMBT1-204ENST00000482396 ODF1Q14990 250 aa12.08□□□□□ -0.48
SFMBT1-204ENST00000482396 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
SFMBT1-204ENST00000482396 KRTAP10-8P60410 259 aa12.07□□□□□ -0.48
SFMBT1-204ENST00000482396 PLA2G2DQ9UNK4 145 aa12.07□□□□□ -0.48
SFMBT1-204ENST00000482396 UBE2BP63146 152 aa12.05□□□□□ -0.48
SFMBT1-204ENST00000482396 REG3GQ6UW15 175 aa12.05□□□□□ -0.48
SFMBT1-204ENST00000482396 ZNF625Q96I27 306 aaPredicted RBP12.05□□□□□ -0.48
SFMBT1-204ENST00000482396 TP73-AS1Q9UF72 201 aa12.05□□□□□ -0.48
SFMBT1-204ENST00000482396 IGLV5-37A0A075B6J1 123 aa12.03□□□□□ -0.48
SFMBT1-204ENST00000482396 PFN2P35080 140 aa12.03□□□□□ -0.48
SFMBT1-204ENST00000482396 ERG28Q9UKR5 140 aa12.03□□□□□ -0.48
SFMBT1-204ENST00000482396 LEPROTL1O95214 131 aa12.02□□□□□ -0.49
SFMBT1-204ENST00000482396 MRPL55Q7Z7F7 128 aaKnown RBP12.02□□□□□ -0.49
SFMBT1-204ENST00000482396 LINC00167Q96N53 147 aa12.01□□□□□ -0.49
SFMBT1-204ENST00000482396 LBHQ53QV2 105 aaPredicted RBP12□□□□□ -0.49
SFMBT1-204ENST00000482396 H0Y9J4 135 aa11.99□□□□□ -0.49
SFMBT1-204ENST00000482396 COX17Q14061 63 aa11.99□□□□□ -0.49
SFMBT1-204ENST00000482396 Q8NDZ9 215 aa11.99□□□□□ -0.49
SFMBT1-204ENST00000482396 SND1-IT1Q9HBX3 110 aa11.99□□□□□ -0.49
SFMBT1-204ENST00000482396 H0Y8G0 127 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST1H2BKO60814 126 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST1H2BJP06899 126 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 FABP4P15090 132 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST1H2BOP23527 126 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST1H2BBP33778 126 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST1H2BDP58876 126 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST1H2BCP62807 126 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST2H2BEQ16778 126 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST1H2BHQ93079 126 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 DIRC1Q969H9 104 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST1H2BNQ99877 126 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 HIST1H2BMQ99879 126 aa11.98□□□□□ -0.49
SFMBT1-204ENST00000482396 RPL37AP8A6NKH3 93 aa11.96□□□□□ -0.49
SFMBT1-204ENST00000482396 KRTAP1-4P0C5Y4 121 aa11.96□□□□□ -0.49
SFMBT1-204ENST00000482396 VPREB1P12018 145 aa11.96□□□□□ -0.49
SFMBT1-204ENST00000482396 SFTA2Q6UW10 78 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms