RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 HERV-K104P63124 156 aa10.06□□□□□ -0.8
CHD3-211ENST00000481999 TRBV6-8A0A0A6YYG3 113 aa10.05□□□□□ -0.8
CHD3-211ENST00000481999 SMIM9A6NGZ8 99 aa10.05□□□□□ -0.8
CHD3-211ENST00000481999 CHCHD5Q9BSY4 110 aa10.05□□□□□ -0.8
CHD3-211ENST00000481999 SHISA2Q6UWI4 295 aa10.05□□□□□ -0.8
CHD3-211ENST00000481999 CLEC2BQ92478 149 aa10.05□□□□□ -0.8
CHD3-211ENST00000481999 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
CHD3-211ENST00000481999 UBE2WQ96B02 151 aa10.04□□□□□ -0.8
CHD3-211ENST00000481999 TRAV26-1A0A087WT03 109 aa10.03□□□□□ -0.8
CHD3-211ENST00000481999 A0A0U1RRA0 63 aa10.03□□□□□ -0.8
CHD3-211ENST00000481999 TEX49A0A1B0GTD5 131 aa10.03□□□□□ -0.8
CHD3-211ENST00000481999 DAD1P61803 113 aa10.03□□□□□ -0.8
CHD3-211ENST00000481999 CLPSL2Q6UWE3 100 aa10.03□□□□□ -0.8
CHD3-211ENST00000481999 PPDPFQ9H3Y8 114 aa10.03□□□□□ -0.8
CHD3-211ENST00000481999 PRO0255Q9UI72 69 aa10.03□□□□□ -0.8
CHD3-211ENST00000481999 PAX4O43316 350 aa10.02□□□□□ -0.8
CHD3-211ENST00000481999 CKS1BP61024 79 aa10.02□□□□□ -0.8
CHD3-211ENST00000481999 SOSTDC1Q6X4U4 206 aa10.02□□□□□ -0.81
CHD3-211ENST00000481999 LYRM9A8MSI8 78 aa10.01□□□□□ -0.81
CHD3-211ENST00000481999 TRAV8-4A0A0B4J246 113 aa10□□□□□ -0.81
CHD3-211ENST00000481999 MIFP14174 115 aa10□□□□□ -0.81
CHD3-211ENST00000481999 COL7A1Q02388 2944 aa10□□□□□ -0.81
CHD3-211ENST00000481999 COX7A2LO14548 114 aa9.99□□□□□ -0.81
CHD3-211ENST00000481999 EGFEM1PQ0D2K5 195 aa9.98□□□□□ -0.81
CHD3-211ENST00000481999 COX7B2Q8TF08 81 aa9.98□□□□□ -0.81
CHD3-211ENST00000481999 SNCGO76070 127 aa9.97□□□□□ -0.81
CHD3-211ENST00000481999 ATP5G1P05496 136 aa9.97□□□□□ -0.81
CHD3-211ENST00000481999 SPART-AS1P0CW21 52 aa9.97□□□□□ -0.81
CHD3-211ENST00000481999 DEFB121Q5J5C9 76 aa9.96□□□□□ -0.81
CHD3-211ENST00000481999 LYSTQ99698 3801 aa9.96□□□□□ -0.82
CHD3-211ENST00000481999 IGHV3OR16-9A0A0B4J2B5 98 aa9.94□□□□□ -0.82
CHD3-211ENST00000481999 FAM240AA0A1B0GVK7 77 aa9.94□□□□□ -0.82
CHD3-211ENST00000481999 C5orf38Q86SI9 138 aa9.94□□□□□ -0.82
CHD3-211ENST00000481999 TOMM7Q9P0U1 55 aa9.94□□□□□ -0.82
CHD3-211ENST00000481999 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
CHD3-211ENST00000481999 TRACP01848 142 aa9.93□□□□□ -0.82
CHD3-211ENST00000481999 Q6ZTC4 211 aa9.93□□□□□ -0.82
CHD3-211ENST00000481999 MIR7-3HGQ8N6C7 128 aa9.93□□□□□ -0.82
CHD3-211ENST00000481999 HUWE1Q7Z6Z7 4374 aaKnown RBP9.93□□□□□ -0.82
CHD3-211ENST00000481999 IGLV10-54A0A075B6I4 117 aa9.93□□□□□ -0.82
CHD3-211ENST00000481999 A0A087WZ39 114 aa9.93□□□□□ -0.82
CHD3-211ENST00000481999 XCL1P47992 114 aa9.93□□□□□ -0.82
CHD3-211ENST00000481999 GAGE2BQ13066 116 aa9.93□□□□□ -0.82
CHD3-211ENST00000481999 GAGE2EQ4V326 116 aa9.93□□□□□ -0.82
CHD3-211ENST00000481999 GAGE2DQ9UEU5 116 aa9.93□□□□□ -0.82
CHD3-211ENST00000481999 CRPP02741 224 aa9.92□□□□□ -0.82
CHD3-211ENST00000481999 MRAPQ8TCY5 172 aa9.92□□□□□ -0.82
CHD3-211ENST00000481999 A0A0J9YWU9 116 aa9.92□□□□□ -0.82
CHD3-211ENST00000481999 MRPL23Q16540 153 aaKnown RBP9.92□□□□□ -0.82
CHD3-211ENST00000481999 LINC00269Q8N2A0 174 aa9.91□□□□□ -0.82
CHD3-211ENST00000481999 C15orf53Q8NAA6 179 aa9.91□□□□□ -0.82
CHD3-211ENST00000481999 C11orf68Q9H3H3 251 aaKnown RBP9.91□□□□□ -0.82
CHD3-211ENST00000481999 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
CHD3-211ENST00000481999 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
CHD3-211ENST00000481999 RPL28P46779 137 aaKnown RBP9.91□□□□□ -0.82
CHD3-211ENST00000481999 LINC00158P58513 81 aa9.91□□□□□ -0.82
CHD3-211ENST00000481999 SND1-IT1Q9HBX3 110 aa9.91□□□□□ -0.82
CHD3-211ENST00000481999 IBA57-AS1B1ANH7 110 aa9.9□□□□□ -0.82
CHD3-211ENST00000481999 Q6Q795 121 aa9.9□□□□□ -0.83
CHD3-211ENST00000481999 NANOS2P60321 138 aaKnown RBP9.89□□□□□ -0.83
CHD3-211ENST00000481999 ANAPC13Q9BS18 74 aa9.89□□□□□ -0.83
CHD3-211ENST00000481999 ANGP03950 147 aaKnown RBP9.89□□□□□ -0.83
CHD3-211ENST00000481999 LINC00337Q8N6G1 96 aa9.88□□□□□ -0.83
CHD3-211ENST00000481999 IGKV2-28A0A075B6P5 120 aa9.88□□□□□ -0.83
CHD3-211ENST00000481999 IGKV2D-28P01615 120 aa9.88□□□□□ -0.83
CHD3-211ENST00000481999 A0A1B0GUV1 79 aa9.87□□□□□ -0.83
CHD3-211ENST00000481999 ACYP1P07311 99 aa9.87□□□□□ -0.83
CHD3-211ENST00000481999 BAALC-AS2P0C853 105 aa9.87□□□□□ -0.83
CHD3-211ENST00000481999 CCL18P55774 89 aa9.87□□□□□ -0.83
CHD3-211ENST00000481999 FAM218AQ96MZ4 157 aa9.87□□□□□ -0.83
CHD3-211ENST00000481999 SS18Q15532 418 aa9.86□□□□□ -0.83
CHD3-211ENST00000481999 C6orf226Q5I0X4 101 aa9.86□□□□□ -0.83
CHD3-211ENST00000481999 TTC32Q5I0X7 151 aa9.85□□□□□ -0.83
CHD3-211ENST00000481999 K7EIL1 84 aa9.85□□□□□ -0.83
CHD3-211ENST00000481999 PFN2P35080 140 aa9.85□□□□□ -0.83
CHD3-211ENST00000481999 NDUFV3P56181 108 aaKnown RBP9.84□□□□□ -0.83
CHD3-211ENST00000481999 KPRPQ5T749 579 aaPredicted RBP9.84□□□□□ -0.83
CHD3-211ENST00000481999 REG3AQ06141 175 aa9.84□□□□□ -0.83
CHD3-211ENST00000481999 LYPD5Q6UWN5 251 aa9.83□□□□□ -0.84
CHD3-211ENST00000481999 LINC01561Q8N1V8 128 aa9.83□□□□□ -0.84
CHD3-211ENST00000481999 SMIM11BQ8TCY0 68 aa9.83□□□□□ -0.84
CHD3-211ENST00000481999 TENM2Q9NT68 2774 aa9.83□□□□□ -0.84
CHD3-211ENST00000481999 H0YGX0 51 aa9.83□□□□□ -0.84
CHD3-211ENST00000481999 WFDC10BQ8IUB3 73 aa9.83□□□□□ -0.84
CHD3-211ENST00000481999 Q8IZM0 81 aa9.83□□□□□ -0.84
CHD3-211ENST00000481999 KLK12Q9UKR0 248 aa9.83□□□□□ -0.84
CHD3-211ENST00000481999 CHCHD10Q8WYQ3 142 aaPredicted RBP9.82□□□□□ -0.84
CHD3-211ENST00000481999 LINC00526Q96FQ7 95 aa9.82□□□□□ -0.84
CHD3-211ENST00000481999 NHLRC4P0CG21 123 aaPredicted RBP9.81□□□□□ -0.84
CHD3-211ENST00000481999 INAFM2P0DMQ5 153 aa9.81□□□□□ -0.84
CHD3-211ENST00000481999 C22orf24Q9Y442 160 aa9.81□□□□□ -0.84
CHD3-211ENST00000481999 CSMD3Q7Z407 3707 aa9.81□□□□□ -0.84
CHD3-211ENST00000481999 DNAL4O96015 105 aa9.81□□□□□ -0.84
CHD3-211ENST00000481999 MALP21145 153 aa9.81□□□□□ -0.84
CHD3-211ENST00000481999 LELP1Q5T871 98 aa9.81□□□□□ -0.84
CHD3-211ENST00000481999 Q9HAA7 133 aa9.81□□□□□ -0.84
CHD3-211ENST00000481999 C11orf45Q8TAV5 145 aa9.8□□□□□ -0.84
CHD3-211ENST00000481999 TRBV7-7A0A0K0K1E9 115 aa9.8□□□□□ -0.84
CHD3-211ENST00000481999 DEFB131BA0A096LNP1 70 aa9.79□□□□□ -0.84
CHD3-211ENST00000481999 A0A087WYN8 130 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms