RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 LINC00588Q9Y4M8 146 aa7.44□□□□□ -1.22
VTI1A-204ENST00000480057 DNAH9Q9NYC9 4486 aa7.44□□□□□ -1.22
VTI1A-204ENST00000480057 IGLV10-54A0A075B6I4 117 aa7.43□□□□□ -1.22
VTI1A-204ENST00000480057 A4D1N5 150 aa7.43□□□□□ -1.22
VTI1A-204ENST00000480057 IGLL5B9A064 214 aa7.43□□□□□ -1.22
VTI1A-204ENST00000480057 KIAA0087Q14695 138 aa7.43□□□□□ -1.22
VTI1A-204ENST00000480057 K7ERJ3 54 aa7.42□□□□□ -1.22
VTI1A-204ENST00000480057 CFC1BP0CG36 223 aa7.42□□□□□ -1.22
VTI1A-204ENST00000480057 CFC1P0CG37 223 aa7.42□□□□□ -1.22
VTI1A-204ENST00000480057 CFAP161Q6P656 301 aa7.42□□□□□ -1.22
VTI1A-204ENST00000480057 MUC7Q8TAX7 377 aa7.42□□□□□ -1.22
VTI1A-204ENST00000480057 LINC00308Q8TCZ7 52 aa7.42□□□□□ -1.22
VTI1A-204ENST00000480057 RAB37Q96AX2 223 aa7.42□□□□□ -1.22
VTI1A-204ENST00000480057 A0A1W2PPM0 123 aa7.41□□□□□ -1.22
VTI1A-204ENST00000480057 NUPR2A6NF83 97 aa7.41□□□□□ -1.22
VTI1A-204ENST00000480057 H3BUT2 72 aa7.41□□□□□ -1.22
VTI1A-204ENST00000480057 CKS1BP61024 79 aa7.41□□□□□ -1.22
VTI1A-204ENST00000480057 COX17Q14061 63 aa7.41□□□□□ -1.22
VTI1A-204ENST00000480057 VAMP3Q15836 100 aa7.41□□□□□ -1.22
VTI1A-204ENST00000480057 KRTAP26-1Q6PEX3 210 aa7.41□□□□□ -1.22
VTI1A-204ENST00000480057 PRO1854Q9UHT4 67 aa7.41□□□□□ -1.22
VTI1A-204ENST00000480057 F8WDY8 70 aa7.4□□□□□ -1.22
VTI1A-204ENST00000480057 FABP2P12104 132 aa7.4□□□□□ -1.22
VTI1A-204ENST00000480057 UBE2V1Q13404 147 aa7.4□□□□□ -1.22
VTI1A-204ENST00000480057 ERG28Q9UKR5 140 aa7.4□□□□□ -1.22
VTI1A-204ENST00000480057 APLNQ9ULZ1 77 aa7.4□□□□□ -1.22
VTI1A-204ENST00000480057 SPAG11BQ08648 103 aa7.39□□□□□ -1.23
VTI1A-204ENST00000480057 GTF2H5Q6ZYL4 71 aa7.39□□□□□ -1.23
VTI1A-204ENST00000480057 RMI2Q96E14 147 aa7.39□□□□□ -1.23
VTI1A-204ENST00000480057 C1orf43Q9BWL3 253 aa7.39□□□□□ -1.23
VTI1A-204ENST00000480057 GVQW2A0A096LPI5 108 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-204ENST00000480057 LINC00158P58513 81 aa7.38□□□□□ -1.23
VTI1A-204ENST00000480057 LYRM7Q5U5X0 104 aa7.38□□□□□ -1.23
VTI1A-204ENST00000480057 PGPEP1Q9NXJ5 209 aa7.38□□□□□ -1.23
VTI1A-204ENST00000480057 LOC107984156A0A0G2JMH3 177 aa7.37□□□□□ -1.23
VTI1A-204ENST00000480057 K7EP34 96 aa7.37□□□□□ -1.23
VTI1A-204ENST00000480057 TSPAN13O95857 204 aa7.37□□□□□ -1.23
VTI1A-204ENST00000480057 ARL17AQ8IVW1 177 aa7.37□□□□□ -1.23
VTI1A-204ENST00000480057 MIR7-3HGQ8N6C7 128 aa7.37□□□□□ -1.23
VTI1A-204ENST00000480057 NTN5Q8WTR8 489 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-204ENST00000480057 GAGE10A6NGK3 116 aa7.36□□□□□ -1.23
VTI1A-204ENST00000480057 EIF4EBP3O60516 100 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-204ENST00000480057 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
VTI1A-204ENST00000480057 SOSTDC1Q6X4U4 206 aa7.36□□□□□ -1.23
VTI1A-204ENST00000480057 DAND5Q8N907 189 aa7.36□□□□□ -1.23
VTI1A-204ENST00000480057 C2orf48Q96LS8 159 aa7.36□□□□□ -1.23
VTI1A-204ENST00000480057 DYNC2H1Q8NCM8 4307 aaKnown RBP7.35□□□□□ -1.23
VTI1A-204ENST00000480057 DNHD1Q96M86 4753 aa7.35□□□□□ -1.23
VTI1A-204ENST00000480057 IGKV2D-24A0A075B6R9 120 aa7.35□□□□□ -1.23
VTI1A-204ENST00000480057 A0A0U1RRA0 63 aa7.35□□□□□ -1.23
VTI1A-204ENST00000480057 C2orf82Q6UX34 121 aa7.35□□□□□ -1.23
VTI1A-204ENST00000480057 SPCS1Q9Y6A9 102 aa7.35□□□□□ -1.23
VTI1A-204ENST00000480057 TRBV30A0A0K0K1B3 111 aa7.34□□□□□ -1.23
VTI1A-204ENST00000480057 PFN2P35080 140 aa7.34□□□□□ -1.23
VTI1A-204ENST00000480057 NPC2P61916 151 aa7.34□□□□□ -1.23
VTI1A-204ENST00000480057 NAA38Q9BRA0 125 aaKnown RBP7.34□□□□□ -1.23
VTI1A-204ENST00000480057 TRAV13-2A0A0B4J235 113 aa7.33□□□□□ -1.24
VTI1A-204ENST00000480057 ZNF561-AS1K7EIQ3 104 aa7.33□□□□□ -1.24
VTI1A-204ENST00000480057 UBE2DNLQ8IWF7 75 aa7.33□□□□□ -1.24
VTI1A-204ENST00000480057 C15orf56Q8N910 161 aa7.33□□□□□ -1.24
VTI1A-204ENST00000480057 SND1-IT1Q9HBX3 110 aa7.33□□□□□ -1.24
VTI1A-204ENST00000480057 TRBV20-1A0A075B6N2 111 aa7.32□□□□□ -1.24
VTI1A-204ENST00000480057 NDUFC2O95298 119 aa7.32□□□□□ -1.24
VTI1A-204ENST00000480057 UNQ6190/PRO20217Q6UXQ8 127 aa7.32□□□□□ -1.24
VTI1A-204ENST00000480057 C6orf223Q8N319 242 aa7.31□□□□□ -1.24
VTI1A-204ENST00000480057 Q9HAA7 133 aa7.31□□□□□ -1.24
VTI1A-204ENST00000480057 STAB2Q8WWQ8 2551 aa7.3□□□□□ -1.24
VTI1A-204ENST00000480057 RPL13AP40429 203 aaKnown RBP7.3□□□□□ -1.24
VTI1A-204ENST00000480057 PSMB2P49721 201 aa7.3□□□□□ -1.24
VTI1A-204ENST00000480057 Q1RN00 199 aa7.3□□□□□ -1.24
VTI1A-204ENST00000480057 TTC32Q5I0X7 151 aa7.3□□□□□ -1.24
VTI1A-204ENST00000480057 C10orf25Q5T742 122 aa7.3□□□□□ -1.24
VTI1A-204ENST00000480057 CAMK2N2Q96S95 79 aa7.3□□□□□ -1.24
VTI1A-204ENST00000480057 C6orf48Q9UBA6 75 aa7.3□□□□□ -1.24
VTI1A-204ENST00000480057 COL7A1Q02388 2944 aa7.29□□□□□ -1.24
VTI1A-204ENST00000480057 LOC100996750A0A140TA64 210 aa7.29□□□□□ -1.24
VTI1A-204ENST00000480057 COX6CP09669 75 aa7.29□□□□□ -1.24
VTI1A-204ENST00000480057 SMCPP49901 116 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-204ENST00000480057 RNF151Q2KHN1 245 aa7.29□□□□□ -1.24
VTI1A-204ENST00000480057 KRTAP4-6Q9BYQ5 205 aa7.29□□□□□ -1.24
VTI1A-204ENST00000480057 IGKV2-28A0A075B6P5 120 aa7.28□□□□□ -1.24
VTI1A-204ENST00000480057 IGKV2D-28P01615 120 aa7.28□□□□□ -1.24
VTI1A-204ENST00000480057 HIGD2BQ4VC39 106 aa7.28□□□□□ -1.24
VTI1A-204ENST00000480057 H7C2G1 150 aa7.27□□□□□ -1.25
VTI1A-204ENST00000480057 TRIAP1O43715 76 aa7.27□□□□□ -1.25
VTI1A-204ENST00000480057 SCGB1C2P0DMR2 95 aa7.27□□□□□ -1.25
VTI1A-204ENST00000480057 SYCNQ0VAF6 134 aa7.27□□□□□ -1.25
VTI1A-204ENST00000480057 PRKDCP78527 4128 aaKnown RBP7.26□□□□□ -1.25
VTI1A-204ENST00000480057 USP17L23D6RBM5 183 aa7.26□□□□□ -1.25
VTI1A-204ENST00000480057 F8W1H4 67 aa7.26□□□□□ -1.25
VTI1A-204ENST00000480057 RPL28P46779 137 aaKnown RBP7.26□□□□□ -1.25
VTI1A-204ENST00000480057 C9orf116Q5BN46 136 aaPredicted RBP7.26□□□□□ -1.25
VTI1A-204ENST00000480057 Q6ZRU5 148 aa7.26□□□□□ -1.25
VTI1A-204ENST00000480057 LINC00526Q96FQ7 95 aa7.26□□□□□ -1.25
VTI1A-204ENST00000480057 NDUFC2-KCTD14E9PQ53 114 aa7.25□□□□□ -1.25
VTI1A-204ENST00000480057 TCL1BO95988 128 aa7.25□□□□□ -1.25
VTI1A-204ENST00000480057 TLX1NBP0CAT3 122 aa7.25□□□□□ -1.25
VTI1A-204ENST00000480057 ATXN8Q156A1 80 aa7.25□□□□□ -1.25
VTI1A-204ENST00000480057 LINC00337Q8N6G1 96 aa7.25□□□□□ -1.25
VTI1A-204ENST00000480057 DNAH1Q9P2D7 4330 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms