RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 PRO0255Q9UI72 69 aa3.44□□□□□ -1.86
COMMD3-212ENST00000479958 IGLV4-60A0A075B6I1 120 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 TRBV6-8A0A0A6YYG3 113 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 HSBP1L1C9JCN9 74 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 ATP5G1P05496 136 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 COX8AP10176 69 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 NMUP48645 174 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 TSPEAR-AS2P59090 65 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 COX6A2Q02221 97 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 C2orf91Q6ZV80 131 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 ATP6V0E2Q8NHE4 81 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 TMEM243Q9BU79 118 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 SNHG12Q9BXW3 62 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 SPANXA1Q9NS26 97 aa3.43□□□□□ -1.86
COMMD3-212ENST00000479958 COL7A1Q02388 2944 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 DNHD1Q96M86 4753 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 IGLV8-61A0A075B6I0 122 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 IGHV3-64A0A075B6Q5 118 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 TRAV8-6A0A0B4J262 113 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 ZNF22P17026 224 aaPredicted RBP3.42□□□□□ -1.86
COMMD3-212ENST00000479958 PLNP26678 52 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 G0S2P27469 103 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 HNRNPA3P51991 378 aaKnown RBP3.42□□□□□ -1.86
COMMD3-212ENST00000479958 DEFA6Q01524 100 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 SLC25A34Q6PIV7 304 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 BOD1L2Q8IYS8 172 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 TM2D3Q9BRN9 247 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 TIMM21Q9BVV7 248 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 GTSF1LQ9H1H1 148 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 CDC42SE2Q9NRR3 84 aa3.42□□□□□ -1.86
COMMD3-212ENST00000479958 TRBV25-1A0A075B6N4 114 aa3.41□□□□□ -1.86
COMMD3-212ENST00000479958 TRAV13-1A0A0B4J241 112 aa3.41□□□□□ -1.86
COMMD3-212ENST00000479958 IGKV3OR2-268A0A0C4DH90 116 aa3.41□□□□□ -1.86
COMMD3-212ENST00000479958 HINT1P49773 126 aaPredicted RBP3.41□□□□□ -1.86
COMMD3-212ENST00000479958 UBE2D1P51668 147 aa3.41□□□□□ -1.86
COMMD3-212ENST00000479958 MRPS36P82909 103 aaKnown RBP3.41□□□□□ -1.86
COMMD3-212ENST00000479958 BATFQ16520 125 aa3.41□□□□□ -1.86
COMMD3-212ENST00000479958 TMEM170BQ5T4T1 132 aa3.41□□□□□ -1.86
COMMD3-212ENST00000479958 AMMECR1LQ6DCA0 310 aa3.41□□□□□ -1.86
COMMD3-212ENST00000479958 MRPL52Q86TS9 123 aaKnown RBP3.41□□□□□ -1.86
COMMD3-212ENST00000479958 OR5A1Q8NGJ0 315 aa3.41□□□□□ -1.86
COMMD3-212ENST00000479958 PLEKHB2Q96CS7 222 aa3.41□□□□□ -1.86
COMMD3-212ENST00000479958 CHAC1Q9BUX1 264 aa3.41□□□□□ -1.86
COMMD3-212ENST00000479958 C11orf68Q9H3H3 251 aaKnown RBP3.41□□□□□ -1.86
COMMD3-212ENST00000479958 TRAV8-3A0A0A6YYJ7 113 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 TMEM223A0PJW6 202 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 LINC01549A6NIU2 74 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 E9PLD3 99 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 TMEM262E9PQX1 116 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 UBE2L6O14933 153 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 SPINK8P0C7L1 97 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 RBX1P62877 108 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 MPV17L2Q567V2 206 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 CLPSL2Q6UWE3 100 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 CDKN2A-AS1Q9UH64 79 aa3.4□□□□□ -1.87
COMMD3-212ENST00000479958 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
COMMD3-212ENST00000479958 DEFB131BA0A096LNP1 70 aa3.39□□□□□ -1.87
COMMD3-212ENST00000479958 TINCRA0A1B0GVN0 87 aa3.39□□□□□ -1.87
COMMD3-212ENST00000479958 K7EP13 123 aa3.39□□□□□ -1.87
COMMD3-212ENST00000479958 M0R143 59 aa3.39□□□□□ -1.87
COMMD3-212ENST00000479958 DLEU1O43261 78 aa3.39□□□□□ -1.87
COMMD3-212ENST00000479958 MRPL23Q16540 153 aaKnown RBP3.39□□□□□ -1.87
COMMD3-212ENST00000479958 LYPD5Q6UWN5 251 aa3.39□□□□□ -1.87
COMMD3-212ENST00000479958 CEND1Q8N111 149 aa3.39□□□□□ -1.87
COMMD3-212ENST00000479958 LINC00469Q8N7U9 141 aa3.39□□□□□ -1.87
COMMD3-212ENST00000479958 MRPS16Q9Y3D3 137 aaKnown RBP3.39□□□□□ -1.87
COMMD3-212ENST00000479958 CSDC2Q9Y534 153 aaKnown RBP3.39□□□□□ -1.87
COMMD3-212ENST00000479958 ICOSQ9Y6W8 199 aa3.39□□□□□ -1.87
COMMD3-212ENST00000479958 STAB2Q8WWQ8 2551 aa3.38□□□□□ -1.87
COMMD3-212ENST00000479958 MYMXA0A1B0GTQ4 84 aa3.38□□□□□ -1.87
COMMD3-212ENST00000479958 J3QQQ9 107 aa3.38□□□□□ -1.87
COMMD3-212ENST00000479958 LEPROTO15243 131 aa3.38□□□□□ -1.87
COMMD3-212ENST00000479958 ESRGQ1W209 222 aa3.38□□□□□ -1.87
COMMD3-212ENST00000479958 BVES-AS1Q5T3Y7 98 aa3.38□□□□□ -1.87
COMMD3-212ENST00000479958 TMEM101Q96IK0 257 aa3.38□□□□□ -1.87
COMMD3-212ENST00000479958 C2orf88Q9BSF0 95 aa3.38□□□□□ -1.87
COMMD3-212ENST00000479958 DYNC2H1Q8NCM8 4307 aaKnown RBP3.38□□□□□ -1.87
COMMD3-212ENST00000479958 LINC00959A0A1B0GUT2 108 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 A0A1B0GV90 55 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 ZNF815PA8K554 130 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 IGHV3-30P01768 117 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 IGHV3-33P01772 117 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 IGHV3-30-3P0DP02 117 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 IGHV3-30-5P0DP03 117 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 ZNF25P17030 456 aaPredicted RBP3.37□□□□□ -1.87
COMMD3-212ENST00000479958 TMEM97Q5BJF2 176 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 LELP1Q5T871 98 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 C5orf38Q86SI9 138 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 WFDC10BQ8IUB3 73 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 LINC00269Q8N2A0 174 aa3.37□□□□□ -1.87
COMMD3-212ENST00000479958 GEMIN7Q9H840 131 aaKnown RBP3.37□□□□□ -1.87
COMMD3-212ENST00000479958 IGLV10-54A0A075B6I4 117 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 IGHV1-58A0A0C4DH39 117 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 SIVA1O15304 175 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 XCL1P47992 114 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 FXYD2P54710 66 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 HERVK_113P61574 105 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 C10orf126Q8N4M7 172 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 B9D2Q9BPU9 175 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms