RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 EVI2AP22794 236 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 RPL35P42766 123 aaKnown RBP2.86□□□□□ -1.95
UPF3A-205ENST00000479712 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 LINC01556Q5JQF7 62 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 Q6ZRU5 148 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 MRPL52Q86TS9 123 aaKnown RBP2.86□□□□□ -1.95
UPF3A-205ENST00000479712 ANAPC13Q9BS18 74 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 GTSF1LQ9H1H1 148 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 GNG13Q9P2W3 67 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 PHLDA3Q9Y5J5 127 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 LY96Q9Y6Y9 160 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 KMT2DO14686 5537 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 C19orf71A6NCJ1 209 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 F2Z2F3 143 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 M0R036 132 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 IGLC6P0CF74 106 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 GNG4P50150 75 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 TMEM241Q24JQ0 296 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 CENPWQ5EE01 88 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 ATP6V0E2Q8NHE4 81 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 CNFNQ9BYD5 112 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 MED9Q9NWA0 146 aa2.85□□□□□ -1.95
UPF3A-205ENST00000479712 TRBV20OR9-2A0A075B6H5 130 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 A0A1B0GV50 99 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 GRIFINA4D1Z8 144 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 IBA57-AS1B1ANH7 110 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.84□□□□□ -1.95
UPF3A-205ENST00000479712 SCGB1C2P0DMR2 95 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 RAB4BP61018 213 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 PKIAP61925 76 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 TMEM97Q5BJF2 176 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 OR10J3Q5JRS4 329 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 Q6ZSA8 131 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 WFDC10BQ8IUB3 73 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 AP1S3Q96PC3 154 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 DERL1Q9BUN8 251 aa2.84□□□□□ -1.95
UPF3A-205ENST00000479712 TRBV7-3A0A075B6L6 115 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 TMSB15BA0A087X1C1 80 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 TRAV8-3A0A0A6YYJ7 113 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 IGHV3-73A0A0B4J1V6 119 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 M0R381 172 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 TRGC1P0CF51 173 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 UBE2D3P61077 147 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 UBE2D2P62837 147 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 ELOBQ15370 118 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 SPANXN1Q5VSR9 72 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 ALKAL2Q6UX46 152 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.83□□□□□ -1.96
UPF3A-205ENST00000479712 FER1L6-AS1Q8NA97 138 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 OR2D3Q8NGH3 330 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 OR10AG1Q8NH19 301 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 DNAJC30Q96LL9 226 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 FAM210AQ96ND0 272 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 SMDT1Q9H4I9 107 aa2.83□□□□□ -1.96
UPF3A-205ENST00000479712 M0QXV9 152 aa2.82□□□□□ -1.96
UPF3A-205ENST00000479712 SMIM17P0DL12 118 aa2.82□□□□□ -1.96
UPF3A-205ENST00000479712 FOXA3P55318 350 aaPredicted RBP2.82□□□□□ -1.96
UPF3A-205ENST00000479712 RPL19P84098 196 aaKnown RBP2.82□□□□□ -1.96
UPF3A-205ENST00000479712 FAM74A4Q5TZK3 123 aa2.82□□□□□ -1.96
UPF3A-205ENST00000479712 NIT1Q86X76 327 aa2.82□□□□□ -1.96
UPF3A-205ENST00000479712 MRAP2Q96G30 205 aa2.82□□□□□ -1.96
UPF3A-205ENST00000479712 LINC01600Q96MT4 127 aa2.82□□□□□ -1.96
UPF3A-205ENST00000479712 URGCP-MRPS24S4R325 110 aa2.82□□□□□ -1.96
UPF3A-205ENST00000479712 MUC17Q685J3 4493 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 TRBV6-8A0A0A6YYG3 113 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 M0QY20 66 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 Q0VG73 95 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 ZNF56Q15929 161 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 IQCJQ1A5X6 159 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 TEX261Q6UWH6 196 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 LYZL1Q6UWQ5 148 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 TMEM136Q6ZRR5 245 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 GATD1Q8NB37 220 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 OSTCQ9NRP0 149 aa2.81□□□□□ -1.96
UPF3A-205ENST00000479712 A0A087WX48 190 aa2.8□□□□□ -1.96
UPF3A-205ENST00000479712 A0A1B0GVG6 124 aa2.8□□□□□ -1.96
UPF3A-205ENST00000479712 ZNF727A8MUV8 499 aa2.8□□□□□ -1.96
UPF3A-205ENST00000479712 PSCAO43653 123 aa2.8□□□□□ -1.96
UPF3A-205ENST00000479712 SRP19P09132 144 aaKnown RBP2.8□□□□□ -1.96
UPF3A-205ENST00000479712 LCE3AQ5TA76 89 aa2.8□□□□□ -1.96
UPF3A-205ENST00000479712 RASL11AQ6T310 242 aa2.8□□□□□ -1.96
UPF3A-205ENST00000479712 SMIM15Q7Z3B0 74 aa2.8□□□□□ -1.96
UPF3A-205ENST00000479712 TSKUQ8WUA8 353 aa2.8□□□□□ -1.96
UPF3A-205ENST00000479712 SMIM7Q9BQ49 75 aa2.8□□□□□ -1.96
UPF3A-205ENST00000479712 EIF5A2Q9GZV4 153 aaKnown RBP2.8□□□□□ -1.96
UPF3A-205ENST00000479712 NIT2Q9NQR4 276 aa2.8□□□□□ -1.96
UPF3A-205ENST00000479712 TRBV25-1A0A075B6N4 114 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 IGHV1-24A0A0C4DH33 117 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 TRBV6-5A0A0K0K1A5 114 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 NCR2O95944 276 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 IGHV3-30P01768 117 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 IGHV3-33P01772 117 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 IGHV3-30-3P0DP02 117 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 IGHV3-30-5P0DP03 117 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 GZMBP10144 247 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 NKX2-5P52952 324 aaPredicted RBP2.79□□□□□ -1.96
UPF3A-205ENST00000479712 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 PEA15Q15121 130 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms