RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 PACRGQ96M98 296 aaPredicted RBP12.94□□□□□ -0.34
PKP4-209ENST00000479398 OXTP01178 125 aa12.93□□□□□ -0.34
PKP4-209ENST00000479398 Q8IZM0 81 aa12.93□□□□□ -0.34
PKP4-209ENST00000479398 CKS1BP61024 79 aa12.92□□□□□ -0.34
PKP4-209ENST00000479398 CBLN2Q8IUK8 224 aa12.92□□□□□ -0.34
PKP4-209ENST00000479398 LINC00469Q8N7U9 141 aa12.92□□□□□ -0.34
PKP4-209ENST00000479398 IGLV5-45A0A087WSX0 123 aa12.91□□□□□ -0.34
PKP4-209ENST00000479398 HBDP02042 147 aa12.91□□□□□ -0.34
PKP4-209ENST00000479398 PRR3P79522 188 aaKnown RBP12.9□□□□□ -0.34
PKP4-209ENST00000479398 PMCHL1Q16048 86 aa12.9□□□□□ -0.34
PKP4-209ENST00000479398 GAGE2EQ4V326 116 aa12.9□□□□□ -0.34
PKP4-209ENST00000479398 GAGE2DQ9UEU5 116 aa12.9□□□□□ -0.34
PKP4-209ENST00000479398 PDZD11Q5EBL8 140 aa12.89□□□□□ -0.35
PKP4-209ENST00000479398 SMIM1B2RUZ4 78 aa12.88□□□□□ -0.35
PKP4-209ENST00000479398 NDUFC2-KCTD14E9PQ53 114 aa12.88□□□□□ -0.35
PKP4-209ENST00000479398 NDUFA6P56556 154 aa12.88□□□□□ -0.35
PKP4-209ENST00000479398 PKHD1L1Q86WI1 4243 aa12.88□□□□□ -0.35
PKP4-209ENST00000479398 ATP5LO75964 103 aa12.86□□□□□ -0.35
PKP4-209ENST00000479398 LRP1Q07954 4544 aaKnown RBP12.86□□□□□ -0.35
PKP4-209ENST00000479398 FAM168BA1KXE4 195 aa12.85□□□□□ -0.35
PKP4-209ENST00000479398 IGLC3P0DOY3 106 aa12.85□□□□□ -0.35
PKP4-209ENST00000479398 PHF5AQ7RTV0 110 aaKnown RBP12.85□□□□□ -0.35
PKP4-209ENST00000479398 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
PKP4-209ENST00000479398 F8VRH5 84 aa12.84□□□□□ -0.35
PKP4-209ENST00000479398 SPINK8P0C7L1 97 aa12.84□□□□□ -0.35
PKP4-209ENST00000479398 CXCL5P42830 114 aa12.84□□□□□ -0.35
PKP4-209ENST00000479398 COX7B2Q8TF08 81 aa12.84□□□□□ -0.35
PKP4-209ENST00000479398 HERC1Q15751 4861 aa12.84□□□□□ -0.35
PKP4-209ENST00000479398 H3BRM9 83 aa12.83□□□□□ -0.36
PKP4-209ENST00000479398 TRGC2P03986 189 aa12.82□□□□□ -0.36
PKP4-209ENST00000479398 C9orf129Q5T035 196 aaKnown RBP12.82□□□□□ -0.36
PKP4-209ENST00000479398 BAGE3Q86Y29 109 aa12.82□□□□□ -0.36
PKP4-209ENST00000479398 SRSF9Q13242 221 aaKnown RBP eCLIP12.81□□□□□ -0.36
PKP4-209ENST00000479398 KRTAP7-1Q8IUC3 87 aa12.81□□□□□ -0.36
PKP4-209ENST00000479398 FAT3Q8TDW7 4589 aa12.8□□□□□ -0.36
PKP4-209ENST00000479398 FAM19A5Q7Z5A7 132 aaPredicted RBP12.8□□□□□ -0.36
PKP4-209ENST00000479398 PSORS1C2Q9UIG4 136 aa12.8□□□□□ -0.36
PKP4-209ENST00000479398 SPINK6Q6UWN8 80 aa12.79□□□□□ -0.36
PKP4-209ENST00000479398 COLCA2A8K830 154 aa12.78□□□□□ -0.36
PKP4-209ENST00000479398 ZNF22P17026 224 aaPredicted RBP12.78□□□□□ -0.36
PKP4-209ENST00000479398 IFI27L1Q96BM0 104 aa12.77□□□□□ -0.37
PKP4-209ENST00000479398 IGLV5-39A0A0G2JS06 123 aa12.76□□□□□ -0.37
PKP4-209ENST00000479398 HSBP1O75506 76 aa12.76□□□□□ -0.37
PKP4-209ENST00000479398 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
PKP4-209ENST00000479398 C11orf86A6NJI1 115 aa12.75□□□□□ -0.37
PKP4-209ENST00000479398 M0QXV9 152 aa12.75□□□□□ -0.37
PKP4-209ENST00000479398 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
PKP4-209ENST00000479398 CHTOPQ9Y3Y2 248 aaKnown RBP12.75□□□□□ -0.37
PKP4-209ENST00000479398 C1orf137Q5JT78 98 aa12.74□□□□□ -0.37
PKP4-209ENST00000479398 KRTAP11-1Q8IUC1 163 aa12.74□□□□□ -0.37
PKP4-209ENST00000479398 TRAV12-1A0A0B4J245 112 aa12.73□□□□□ -0.37
PKP4-209ENST00000479398 MT1HL1P0DM35 61 aa12.73□□□□□ -0.37
PKP4-209ENST00000479398 TMEM170BQ5T4T1 132 aa12.73□□□□□ -0.37
PKP4-209ENST00000479398 SERTAD4-AS1Q5TG53 156 aa12.72□□□□□ -0.37
PKP4-209ENST00000479398 C22orf24Q9Y442 160 aa12.71□□□□□ -0.37
PKP4-209ENST00000479398 SERF1AO75920 110 aa12.7□□□□□ -0.38
PKP4-209ENST00000479398 UBE2BP63146 152 aa12.7□□□□□ -0.38
PKP4-209ENST00000479398 LINC01600Q96MT4 127 aa12.7□□□□□ -0.38
PKP4-209ENST00000479398 LINC00310P59036 64 aa12.69□□□□□ -0.38
PKP4-209ENST00000479398 REG3GQ6UW15 175 aa12.69□□□□□ -0.38
PKP4-209ENST00000479398 IGLV7-43P04211 117 aa12.68□□□□□ -0.38
PKP4-209ENST00000479398 ODF1Q14990 250 aa12.68□□□□□ -0.38
PKP4-209ENST00000479398 NUPR1O60356 82 aa12.67□□□□□ -0.38
PKP4-209ENST00000479398 LBHQ53QV2 105 aaPredicted RBP12.67□□□□□ -0.38
PKP4-209ENST00000479398 TMEM223A0PJW6 202 aa12.66□□□□□ -0.38
PKP4-209ENST00000479398 LEPROTL1O95214 131 aa12.66□□□□□ -0.38
PKP4-209ENST00000479398 PLA2G2DQ9UNK4 145 aa12.66□□□□□ -0.38
PKP4-209ENST00000479398 SCO1O75880 301 aa12.65□□□□□ -0.38
PKP4-209ENST00000479398 PFN2P35080 140 aa12.65□□□□□ -0.38
PKP4-209ENST00000479398 TP73-AS1Q9UF72 201 aa12.65□□□□□ -0.38
PKP4-209ENST00000479398 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
PKP4-209ENST00000479398 COX17Q14061 63 aa12.63□□□□□ -0.39
PKP4-209ENST00000479398 MRPL55Q7Z7F7 128 aaKnown RBP12.63□□□□□ -0.39
PKP4-209ENST00000479398 ZNF625Q96I27 306 aaPredicted RBP12.63□□□□□ -0.39
PKP4-209ENST00000479398 ERG28Q9UKR5 140 aa12.63□□□□□ -0.39
PKP4-209ENST00000479398 H0Y8G0 127 aa12.61□□□□□ -0.39
PKP4-209ENST00000479398 FABP4P15090 132 aa12.61□□□□□ -0.39
PKP4-209ENST00000479398 KRTAP10-8P60410 259 aa12.61□□□□□ -0.39
PKP4-209ENST00000479398 DIRC1Q969H9 104 aa12.61□□□□□ -0.39
PKP4-209ENST00000479398 HSPB8Q9UJY1 196 aa12.61□□□□□ -0.39
PKP4-209ENST00000479398 LINC00167Q96N53 147 aa12.6□□□□□ -0.39
PKP4-209ENST00000479398 IGLV5-37A0A075B6J1 123 aa12.59□□□□□ -0.39
PKP4-209ENST00000479398 SND1-IT1Q9HBX3 110 aa12.59□□□□□ -0.39
PKP4-209ENST00000479398 RPL37AP8A6NKH3 93 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 H0Y9J4 135 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST1H2BKO60814 126 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST1H2BJP06899 126 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST1H2BOP23527 126 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST1H2BBP33778 126 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST1H2BDP58876 126 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST1H2BCP62807 126 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST2H2BEQ16778 126 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.56□□□□□ -0.4
PKP4-209ENST00000479398 NKAPP1Q8N9T2 125 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST1H2BHQ93079 126 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST1H2BNQ99877 126 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 HIST1H2BMQ99879 126 aa12.56□□□□□ -0.4
PKP4-209ENST00000479398 LINC00158P58513 81 aa12.55□□□□□ -0.4
PKP4-209ENST00000479398 GAGE10A6NGK3 116 aa12.54□□□□□ -0.4
PKP4-209ENST00000479398 ZNF861PO60384 105 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms