RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PLAC8Q9NZF1 115 aa13.01□□□□□ -0.33
VARS-224ENST00000479051 SMIM1B2RUZ4 78 aa13□□□□□ -0.33
VARS-224ENST00000479051 CXCL5P42830 114 aa13□□□□□ -0.33
VARS-224ENST00000479051 C2orf82Q6UX34 121 aa13□□□□□ -0.33
VARS-224ENST00000479051 C6orf48Q9UBA6 75 aa13□□□□□ -0.33
VARS-224ENST00000479051 S100A1P23297 94 aa12.99□□□□□ -0.33
VARS-224ENST00000479051 SPINK8P0C7L1 97 aa12.98□□□□□ -0.33
VARS-224ENST00000479051 TLX1NBP0CAT3 122 aa12.98□□□□□ -0.33
VARS-224ENST00000479051 CHTOPQ9Y3Y2 248 aaKnown RBP12.98□□□□□ -0.33
VARS-224ENST00000479051 TRAV12-1A0A0B4J245 112 aa12.97□□□□□ -0.33
VARS-224ENST00000479051 LEPROTL1O95214 131 aa12.97□□□□□ -0.33
VARS-224ENST00000479051 COX7B2Q8TF08 81 aa12.97□□□□□ -0.33
VARS-224ENST00000479051 ZNF22P17026 224 aaPredicted RBP12.96□□□□□ -0.33
VARS-224ENST00000479051 LINC00310P59036 64 aa12.96□□□□□ -0.33
VARS-224ENST00000479051 C7orf33Q8WU49 177 aa12.96□□□□□ -0.33
VARS-224ENST00000479051 HSPB8Q9UJY1 196 aa12.96□□□□□ -0.33
VARS-224ENST00000479051 F8VRH5 84 aa12.95□□□□□ -0.34
VARS-224ENST00000479051 INAFM2P0DMQ5 153 aa12.95□□□□□ -0.34
VARS-224ENST00000479051 RPL37AP61513 92 aaKnown RBP12.95□□□□□ -0.34
VARS-224ENST00000479051 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
VARS-224ENST00000479051 FAT1Q14517 4588 aa12.95□□□□□ -0.34
VARS-224ENST00000479051 C11orf86A6NJI1 115 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 NDUFC2-KCTD14E9PQ53 114 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST1H2BKO60814 126 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST1H2BJP06899 126 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST1H2BOP23527 126 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST1H2BBP33778 126 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST1H2BDP58876 126 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST1H2BCP62807 126 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST2H2BEQ16778 126 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST1H2BHQ93079 126 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST1H2BNQ99877 126 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 HIST1H2BMQ99879 126 aa12.93□□□□□ -0.34
VARS-224ENST00000479051 ATP6V1G1O75348 118 aa12.92□□□□□ -0.34
VARS-224ENST00000479051 Q6ZRP5 223 aa12.92□□□□□ -0.34
VARS-224ENST00000479051 NUPR1O60356 82 aa12.91□□□□□ -0.34
VARS-224ENST00000479051 FABP4P15090 132 aa12.91□□□□□ -0.34
VARS-224ENST00000479051 GAGE2EQ4V326 116 aa12.91□□□□□ -0.34
VARS-224ENST00000479051 GAGE2DQ9UEU5 116 aa12.91□□□□□ -0.34
VARS-224ENST00000479051 VPS13BQ7Z7G8 4022 aa12.91□□□□□ -0.34
VARS-224ENST00000479051 PCLOQ9Y6V0 5065 aa12.91□□□□□ -0.34
VARS-224ENST00000479051 IGLV5-39A0A0G2JS06 123 aa12.9□□□□□ -0.34
VARS-224ENST00000479051 H0Y8G0 127 aa12.9□□□□□ -0.34
VARS-224ENST00000479051 C9orf116Q5BN46 136 aaPredicted RBP12.9□□□□□ -0.34
VARS-224ENST00000479051 ABCA13Q86UQ4 5058 aa12.89□□□□□ -0.35
VARS-224ENST00000479051 SRRM2Q9UQ35 2752 aaKnown RBP12.88□□□□□ -0.35
VARS-224ENST00000479051 A0A1W2PNN7 141 aa12.86□□□□□ -0.35
VARS-224ENST00000479051 ODF1Q14990 250 aa12.86□□□□□ -0.35
VARS-224ENST00000479051 SFTA2Q6UW10 78 aa12.86□□□□□ -0.35
VARS-224ENST00000479051 MAP1LC3CQ9BXW4 147 aa12.86□□□□□ -0.35
VARS-224ENST00000479051 TMEM223A0PJW6 202 aa12.84□□□□□ -0.35
VARS-224ENST00000479051 PLNP26678 52 aa12.84□□□□□ -0.35
VARS-224ENST00000479051 KRTAP10-4P60372 401 aaPredicted RBP12.84□□□□□ -0.35
VARS-224ENST00000479051 FAM19A5Q7Z5A7 132 aaPredicted RBP12.82□□□□□ -0.36
VARS-224ENST00000479051 FAM168BA1KXE4 195 aa12.8□□□□□ -0.36
VARS-224ENST00000479051 DPM2O94777 84 aa12.8□□□□□ -0.36
VARS-224ENST00000479051 COA6Q5JTJ3 125 aaKnown RBP12.8□□□□□ -0.36
VARS-224ENST00000479051 C9orf129Q5T035 196 aaKnown RBP12.8□□□□□ -0.36
VARS-224ENST00000479051 XAGE1AQ9HD64 81 aa12.79□□□□□ -0.36
VARS-224ENST00000479051 IGKCP01834 107 aa12.78□□□□□ -0.36
VARS-224ENST00000479051 HERVK_113P61574 105 aa12.78□□□□□ -0.36
VARS-224ENST00000479051 PRR3P79522 188 aaKnown RBP12.78□□□□□ -0.36
VARS-224ENST00000479051 PHF5AQ7RTV0 110 aaKnown RBP12.78□□□□□ -0.36
VARS-224ENST00000479051 M0QXV9 152 aa12.77□□□□□ -0.37
VARS-224ENST00000479051 COX17Q14061 63 aa12.77□□□□□ -0.37
VARS-224ENST00000479051 ERG28Q9UKR5 140 aa12.77□□□□□ -0.37
VARS-224ENST00000479051 PFN2P35080 140 aa12.76□□□□□ -0.37
VARS-224ENST00000479051 SYS1-DBNDD2H3BUS1 97 aa12.75□□□□□ -0.37
VARS-224ENST00000479051 ZNF625Q96I27 306 aaPredicted RBP12.75□□□□□ -0.37
VARS-224ENST00000479051 PMCHL2Q9BQD1 86 aa12.75□□□□□ -0.37
VARS-224ENST00000479051 PLEKHB2Q96CS7 222 aa12.73□□□□□ -0.37
VARS-224ENST00000479051 FLG2Q5D862 2391 aaPredicted RBP12.72□□□□□ -0.37
VARS-224ENST00000479051 HERV-K104P63124 156 aa12.72□□□□□ -0.37
VARS-224ENST00000479051 UBE2BP63146 152 aa12.72□□□□□ -0.37
VARS-224ENST00000479051 PET117Q6UWS5 81 aa12.72□□□□□ -0.37
VARS-224ENST00000479051 LEPROTO15243 131 aa12.71□□□□□ -0.37
VARS-224ENST00000479051 LBHQ53QV2 105 aaPredicted RBP12.71□□□□□ -0.37
VARS-224ENST00000479051 SERTAD4-AS1Q5TG53 156 aa12.71□□□□□ -0.37
VARS-224ENST00000479051 KRTAP7-1Q8IUC3 87 aa12.71□□□□□ -0.37
VARS-224ENST00000479051 NDUFA12Q9UI09 145 aa12.71□□□□□ -0.37
VARS-224ENST00000479051 MYMXA0A1B0GTQ4 84 aa12.7□□□□□ -0.38
VARS-224ENST00000479051 LINC00587B1AMM8 73 aa12.7□□□□□ -0.38
VARS-224ENST00000479051 HNRNPA3P51991 378 aaKnown RBP12.7□□□□□ -0.38
VARS-224ENST00000479051 LINC00158P58513 81 aa12.7□□□□□ -0.38
VARS-224ENST00000479051 PSORS1C2Q9UIG4 136 aa12.7□□□□□ -0.38
VARS-224ENST00000479051 PLA2G2DQ9UNK4 145 aa12.7□□□□□ -0.38
VARS-224ENST00000479051 C22orf24Q9Y442 160 aa12.7□□□□□ -0.38
VARS-224ENST00000479051 MEIG1Q5JSS6 88 aa12.69□□□□□ -0.38
VARS-224ENST00000479051 TP73-AS1Q9UF72 201 aa12.69□□□□□ -0.38
VARS-224ENST00000479051 C1orf137Q5JT78 98 aa12.68□□□□□ -0.38
VARS-224ENST00000479051 LINC01545Q5VT33 79 aa12.68□□□□□ -0.38
VARS-224ENST00000479051 J3QQQ9 107 aa12.67□□□□□ -0.38
VARS-224ENST00000479051 C3orf79P0CE67 100 aa12.67□□□□□ -0.38
VARS-224ENST00000479051 LGALS3P17931 250 aaKnown RBP12.67□□□□□ -0.38
VARS-224ENST00000479051 KRTDAPP60985 99 aa12.67□□□□□ -0.38
VARS-224ENST00000479051 NKAPP1Q8N9T2 125 aa12.67□□□□□ -0.38
VARS-224ENST00000479051 SND1-IT1Q9HBX3 110 aa12.67□□□□□ -0.38
VARS-224ENST00000479051 C20orf202A1L168 122 aa12.66□□□□□ -0.38
VARS-224ENST00000479051 NMUP48645 174 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms