RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 PRSS2P07478 247 aa17.11■□□□□ 0.33
CCM2-211ENST00000478582 FABP4P15090 132 aa17.11■□□□□ 0.33
CCM2-211ENST00000478582 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.11■□□□□ 0.33
CCM2-211ENST00000478582 FAM229AH3BQW9 127 aa17.1■□□□□ 0.33
CCM2-211ENST00000478582 C6orf226Q5I0X4 101 aa17.1■□□□□ 0.33
CCM2-211ENST00000478582 C10orf25Q5T742 122 aa17.1■□□□□ 0.33
CCM2-211ENST00000478582 UNQ6190/PRO20217Q6UXQ8 127 aa17.1■□□□□ 0.33
CCM2-211ENST00000478582 TOMM7Q9P0U1 55 aa17.1■□□□□ 0.33
CCM2-211ENST00000478582 PANO1I0J062 215 aa17.09■□□□□ 0.33
CCM2-211ENST00000478582 SPINK8P0C7L1 97 aa17.09■□□□□ 0.33
CCM2-211ENST00000478582 ODF1Q14990 250 aa17.08■□□□□ 0.32
CCM2-211ENST00000478582 SCXQ7RTU7 201 aa17.08■□□□□ 0.32
CCM2-211ENST00000478582 LOC107984640A0A0U1RRK4 108 aa17.07■□□□□ 0.32
CCM2-211ENST00000478582 C2orf82Q6UX34 121 aa17.07■□□□□ 0.32
CCM2-211ENST00000478582 CIRBP-AS1Q8TBR5 109 aa17.07■□□□□ 0.32
CCM2-211ENST00000478582 C6orf48Q9UBA6 75 aa17.07■□□□□ 0.32
CCM2-211ENST00000478582 IGLV5-39A0A0G2JS06 123 aa17.06■□□□□ 0.32
CCM2-211ENST00000478582 TRBV30A0A0K0K1B3 111 aa17.06■□□□□ 0.32
CCM2-211ENST00000478582 INAFM2P0DMQ5 153 aa17.06■□□□□ 0.32
CCM2-211ENST00000478582 CKS1BP61024 79 aa17.06■□□□□ 0.32
CCM2-211ENST00000478582 SPACA4Q8TDM5 124 aa17.06■□□□□ 0.32
CCM2-211ENST00000478582 COX7B2Q8TF08 81 aa17.06■□□□□ 0.32
CCM2-211ENST00000478582 A0A096LNI7 61 aa17.05■□□□□ 0.32
CCM2-211ENST00000478582 CHTF8P0CG12 524 aa17.05■□□□□ 0.32
CCM2-211ENST00000478582 CXCL5P42830 114 aa17.05■□□□□ 0.32
CCM2-211ENST00000478582 TMEM170BQ5T4T1 132 aa17.05■□□□□ 0.32
CCM2-211ENST00000478582 MAP1LC3CQ9BXW4 147 aa17.04■□□□□ 0.32
CCM2-211ENST00000478582 LINC00474Q9P2X8 69 aa17.04■□□□□ 0.32
CCM2-211ENST00000478582 H0Y8G0 127 aa17.03■□□□□ 0.32
CCM2-211ENST00000478582 TLX1NBP0CAT3 122 aa17.03■□□□□ 0.32
CCM2-211ENST00000478582 IGKV2-24A0A0C4DH68 120 aa17.01■□□□□ 0.31
CCM2-211ENST00000478582 PTTG1IPP53801 180 aa17.01■□□□□ 0.31
CCM2-211ENST00000478582 DPH3Q96FX2 82 aa17■□□□□ 0.31
CCM2-211ENST00000478582 TMEM223A0PJW6 202 aa16.99■□□□□ 0.31
CCM2-211ENST00000478582 MAJINQ3KP22 176 aa16.99■□□□□ 0.31
CCM2-211ENST00000478582 VPS13BQ7Z7G8 4022 aa16.98■□□□□ 0.31
CCM2-211ENST00000478582 A0A087WYN8 130 aa16.98■□□□□ 0.31
CCM2-211ENST00000478582 PLNP26678 52 aa16.98■□□□□ 0.31
CCM2-211ENST00000478582 GAGE2BQ13066 116 aa16.98■□□□□ 0.31
CCM2-211ENST00000478582 PLAC8Q9NZF1 115 aa16.97■□□□□ 0.31
CCM2-211ENST00000478582 SYS1-DBNDD2H3BUS1 97 aa16.96■□□□□ 0.31
CCM2-211ENST00000478582 RPL18AQ02543 176 aaKnown RBP16.96■□□□□ 0.31
CCM2-211ENST00000478582 DPM2O94777 84 aa16.95■□□□□ 0.3
CCM2-211ENST00000478582 C9orf116Q5BN46 136 aaPredicted RBP16.95■□□□□ 0.3
CCM2-211ENST00000478582 LINC00528Q8N1L1 170 aa16.95■□□□□ 0.3
CCM2-211ENST00000478582 NDUFC2-KCTD14E9PQ53 114 aa16.94■□□□□ 0.3
CCM2-211ENST00000478582 Q6ZRP5 223 aa16.94■□□□□ 0.3
CCM2-211ENST00000478582 PLA2G1BP04054 148 aaKnown RBP16.93■□□□□ 0.3
CCM2-211ENST00000478582 STPG4Q8N801 248 aa16.93■□□□□ 0.3
CCM2-211ENST00000478582 PET117Q6UWS5 81 aa16.92■□□□□ 0.3
CCM2-211ENST00000478582 IGKCP01834 107 aa16.91■□□□□ 0.3
CCM2-211ENST00000478582 PMCHL2Q9BQD1 86 aa16.91■□□□□ 0.3
CCM2-211ENST00000478582 SRRM2Q9UQ35 2752 aaKnown RBP16.91■□□□□ 0.3
CCM2-211ENST00000478582 LINC01545Q5VT33 79 aa16.9■□□□□ 0.3
CCM2-211ENST00000478582 SFTA2Q6UW10 78 aa16.9■□□□□ 0.3
CCM2-211ENST00000478582 C3orf79P0CE67 100 aa16.89■□□□□ 0.29
CCM2-211ENST00000478582 S100A6P06703 90 aa16.87■□□□□ 0.29
CCM2-211ENST00000478582 GAGE2EQ4V326 116 aa16.87■□□□□ 0.29
CCM2-211ENST00000478582 HIST3H2BBQ8N257 126 aa16.87■□□□□ 0.29
CCM2-211ENST00000478582 GAGE2DQ9UEU5 116 aa16.87■□□□□ 0.29
CCM2-211ENST00000478582 ZNF625Q96I27 306 aaPredicted RBP16.86■□□□□ 0.29
CCM2-211ENST00000478582 A0A1W2PNN7 141 aa16.84■□□□□ 0.29
CCM2-211ENST00000478582 KRTDAPP60985 99 aa16.84■□□□□ 0.29
CCM2-211ENST00000478582 FLG2Q5D862 2391 aaPredicted RBP16.82■□□□□ 0.28
CCM2-211ENST00000478582 LEPROTO15243 131 aa16.82■□□□□ 0.28
CCM2-211ENST00000478582 HERVK_113P61574 105 aa16.82■□□□□ 0.28
CCM2-211ENST00000478582 S100A2P29034 98 aa16.81■□□□□ 0.28
CCM2-211ENST00000478582 C9orf129Q5T035 196 aaKnown RBP16.81■□□□□ 0.28
CCM2-211ENST00000478582 PLEKHB2Q96CS7 222 aa16.81■□□□□ 0.28
CCM2-211ENST00000478582 HIST1H2BLQ99880 126 aa16.81■□□□□ 0.28
CCM2-211ENST00000478582 COX17Q14061 63 aa16.79■□□□□ 0.28
CCM2-211ENST00000478582 ERG28Q9UKR5 140 aa16.79■□□□□ 0.28
CCM2-211ENST00000478582 SNRPEP62304 92 aaKnown RBP16.78■□□□□ 0.28
CCM2-211ENST00000478582 KRTAP10-4P60372 401 aaPredicted RBP16.77■□□□□ 0.28
CCM2-211ENST00000478582 FAM168BA1KXE4 195 aa16.76■□□□□ 0.27
CCM2-211ENST00000478582 C20orf202A1L168 122 aa16.76■□□□□ 0.27
CCM2-211ENST00000478582 C5orf52A6NGY3 159 aa16.76■□□□□ 0.27
CCM2-211ENST00000478582 HERV-K104P63124 156 aa16.76■□□□□ 0.27
CCM2-211ENST00000478582 C7orf33Q8WU49 177 aa16.76■□□□□ 0.27
CCM2-211ENST00000478582 NDUFA12Q9UI09 145 aa16.76■□□□□ 0.27
CCM2-211ENST00000478582 E9PLD3 99 aa16.75■□□□□ 0.27
CCM2-211ENST00000478582 J3QQQ9 107 aa16.75■□□□□ 0.27
CCM2-211ENST00000478582 PFN2P35080 140 aa16.75■□□□□ 0.27
CCM2-211ENST00000478582 TSPEAR-AS2P59090 65 aa16.75■□□□□ 0.27
CCM2-211ENST00000478582 XAGE1AQ9HD64 81 aa16.75■□□□□ 0.27
CCM2-211ENST00000478582 MYMXA0A1B0GTQ4 84 aa16.74■□□□□ 0.27
CCM2-211ENST00000478582 KRTAP7-1Q8IUC3 87 aa16.74■□□□□ 0.27
CCM2-211ENST00000478582 RPL37AP61513 92 aaKnown RBP16.73■□□□□ 0.27
CCM2-211ENST00000478582 MYCBP2O75592 4640 aa16.73■□□□□ 0.27
CCM2-211ENST00000478582 NMUP48645 174 aa16.72■□□□□ 0.27
CCM2-211ENST00000478582 AKR1D1P51857 326 aa16.72■□□□□ 0.27
CCM2-211ENST00000478582 FAM19A5Q7Z5A7 132 aaPredicted RBP16.71■□□□□ 0.27
CCM2-211ENST00000478582 LGALS3P17931 250 aaKnown RBP16.7■□□□□ 0.26
CCM2-211ENST00000478582 LINC00587B1AMM8 73 aa16.69■□□□□ 0.26
CCM2-211ENST00000478582 PLA2G2DQ9UNK4 145 aa16.69■□□□□ 0.26
CCM2-211ENST00000478582 DMBT1Q9UGM3 2413 aaPredicted RBP16.69■□□□□ 0.26
CCM2-211ENST00000478582 PHF5AQ7RTV0 110 aaKnown RBP16.68■□□□□ 0.26
CCM2-211ENST00000478582 LINC00158P58513 81 aa16.67■□□□□ 0.26
CCM2-211ENST00000478582 SERTAD4-AS1Q5TG53 156 aa16.67■□□□□ 0.26
CCM2-211ENST00000478582 SND1-IT1Q9HBX3 110 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms