RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CLPSL1A2RUU4 121 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 LINC01546A6NGU7 62 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 ODF3BA8MYP8 253 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 INSP01308 110 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 IGLV1-47P01700 117 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 P0C879 139 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 DEFB133Q30KQ1 61 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 C10orf128Q5T292 105 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 KPRPQ5T749 579 aaPredicted RBP2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 OBSCN-AS1Q96MR7 158 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 ZNRD1Q9P1U0 126 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 ICOSQ9Y6W8 199 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 U3KQA8 63 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 RELNP78509 3460 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 MYO18BQ8IUG5 2567 aa2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 GOLGA4Q13439 2230 aaKnown RBP2.22□□□□□ -2.05
FNDC3B-209ENST00000478016 IGKV1D-42A0A075B6H8 117 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 IGHV1-18A0A0C4DH31 117 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 CTXND1A0A1B0GTU2 59 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 A0A1W2PPR1 153 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 KRTAP10-5P60370 271 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 CNBPP62633 177 aaKnown RBP2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 PTPN13Q12923 2485 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 LINC00483Q53H64 154 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 SPANXN5Q5MJ07 72 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 KNL1Q8NG31 2342 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 TMEM254Q8TBM7 123 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 AMELXQ99217 191 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 Q9BRP9 147 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 PRR34Q9NV39 138 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 LENEPQ9Y5L5 61 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 CABIN1Q9Y6J0 2220 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 COL12A1Q99715 3063 aa2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 UBR5O95071 2799 aaPredicted RBP2.21□□□□□ -2.06
FNDC3B-209ENST00000478016 SCN3AQ9NY46 2000 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 URB1O60287 2271 aaKnown RBP2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 PIEZO2Q9H5I5 2752 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 A0A096LNJ9 63 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 TRAV10A0A0B4J240 114 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 SPTY2D1-AS1A0A0U1RR47 76 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 HIGD1CA8MV81 97 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 J3QKU1 62 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 HMGN4O00479 90 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 DSCR10P59022 87 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 C1orf137Q5JT78 98 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 SFTA2Q6UW10 78 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 Q8N377 158 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 C14orf178Q8N769 122 aaPredicted RBP2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 TMEM263Q8WUH6 116 aaKnown RBP2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 TMEM14AQ9Y6G1 99 aa2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 HEATR1Q9H583 2144 aaKnown RBP2.2□□□□□ -2.06
FNDC3B-209ENST00000478016 NCOA6Q14686 2063 aaPredicted RBP2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 NBPF19A0A087WUL8 3843 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 SPTA1P02549 2419 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 TLN1Q9Y490 2541 aaKnown RBP2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 A0A087WVE0 104 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 IGKV3D-11A0A0A0MRZ8 115 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 TRBV10-1A0A0K0K1A3 114 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 H3BQ85 93 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 FAM74A4Q5TZK3 123 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 ZNF833PQ6ZTB9 187 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 KLHL30-AS1Q8NEE0 82 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 Q8TAT8 98 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 PATE1Q8WXA2 126 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 SHROOM3Q8TF72 1996 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 LRRK2Q5S007 2527 aa2.19□□□□□ -2.06
FNDC3B-209ENST00000478016 NAV2Q8IVL1 2488 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 ASXL3Q9C0F0 2248 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 RP1P56715 2156 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 SDK2Q58EX2 2172 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 FLNCQ14315 2725 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 COL6A6A6NMZ7 2263 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 IGLV2-18A0A075B6J9 118 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 IGHV3-64A0A075B6Q5 118 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 A0A0J9YY99 117 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 D6R8Y8 96 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 IGHV3-53P01767 116 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 IGHV3-30P01768 117 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 GIG44P09565 113 aaPredicted RBP2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 IGHV3-30-5P0DP03 117 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 DEFA4P12838 97 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 COX6B1P14854 86 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 SPINT3P49223 89 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 Q5W150 140 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 MUSTN1Q8IVN3 82 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 Q8NAQ8 132 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 LINC00167Q96N53 147 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 WFDC6Q9BQY6 131 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 SNURFQ9Y675 71 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 LHFPL6Q9Y693 200 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 LINC01558Q9Y6Z2 57 aa2.18□□□□□ -2.06
FNDC3B-209ENST00000478016 AHCTF1Q8WYP5 2266 aa2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 CSMD1Q96PZ7 3565 aa2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 TRAV12-1A0A0B4J245 112 aa2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 TRBV6-5A0A0K0K1A5 114 aa2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 A0A1B0GU33 70 aa2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 PLNP26678 52 aa2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 Q1RN00 199 aa2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 DEFB113Q30KQ7 82 aa2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 SPINK14Q6IE38 97 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms