RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ALKBH7Q9BT30 221 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1-202ENST00000477757 BATF3Q9NR55 127 aa11.52□□□□□ -0.57
PDLIM1-202ENST00000477757 RAB5AP20339 215 aa11.51□□□□□ -0.57
PDLIM1-202ENST00000477757 LINC00337Q8N6G1 96 aa11.51□□□□□ -0.57
PDLIM1-202ENST00000477757 PNRC1Q12796 327 aaPredicted RBP11.5□□□□□ -0.57
PDLIM1-202ENST00000477757 IGLV5-37A0A075B6J1 123 aa11.49□□□□□ -0.57
PDLIM1-202ENST00000477757 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
PDLIM1-202ENST00000477757 PPBPP02775 128 aa11.48□□□□□ -0.57
PDLIM1-202ENST00000477757 ZC2HC1BQ5TFG8 222 aa11.48□□□□□ -0.57
PDLIM1-202ENST00000477757 BLOC1S1P78537 153 aa11.47□□□□□ -0.57
PDLIM1-202ENST00000477757 FAM19A3Q7Z5A8 133 aa11.47□□□□□ -0.57
PDLIM1-202ENST00000477757 C3orf22Q8N5N4 141 aa11.47□□□□□ -0.57
PDLIM1-202ENST00000477757 AMELXQ99217 191 aa11.47□□□□□ -0.57
PDLIM1-202ENST00000477757 F8W036 122 aa11.46□□□□□ -0.57
PDLIM1-202ENST00000477757 CXCL5P42830 114 aa11.46□□□□□ -0.57
PDLIM1-202ENST00000477757 SEC61BP60468 96 aaKnown RBP11.46□□□□□ -0.57
PDLIM1-202ENST00000477757 SPAG11AQ6PDA7 123 aa11.46□□□□□ -0.57
PDLIM1-202ENST00000477757 PRLHP81277 87 aa11.45□□□□□ -0.58
PDLIM1-202ENST00000477757 NKAPP1Q8N9T2 125 aa11.45□□□□□ -0.58
PDLIM1-202ENST00000477757 S100A8P05109 93 aa11.44□□□□□ -0.58
PDLIM1-202ENST00000477757 IGKV2-28A0A075B6P5 120 aa11.43□□□□□ -0.58
PDLIM1-202ENST00000477757 IGKV2D-28P01615 120 aa11.43□□□□□ -0.58
PDLIM1-202ENST00000477757 C2orf66Q6UXQ4 117 aa11.43□□□□□ -0.58
PDLIM1-202ENST00000477757 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
PDLIM1-202ENST00000477757 VCX2Q9H322 139 aa11.43□□□□□ -0.58
PDLIM1-202ENST00000477757 CDKN2A-AS1Q9UH64 79 aa11.43□□□□□ -0.58
PDLIM1-202ENST00000477757 CYSLTR1Q9Y271 337 aa11.43□□□□□ -0.58
PDLIM1-202ENST00000477757 A0A1B0GXF2 115 aa11.42□□□□□ -0.58
PDLIM1-202ENST00000477757 MRPL54Q6P161 138 aaKnown RBP11.42□□□□□ -0.58
PDLIM1-202ENST00000477757 SRP19P09132 144 aaKnown RBP11.41□□□□□ -0.58
PDLIM1-202ENST00000477757 NPSP0C0P6 89 aa11.41□□□□□ -0.58
PDLIM1-202ENST00000477757 RPL23P62829 140 aaKnown RBP11.41□□□□□ -0.58
PDLIM1-202ENST00000477757 HERVK_113P63121 156 aa11.41□□□□□ -0.58
PDLIM1-202ENST00000477757 LCE2CQ5TA81 110 aa11.41□□□□□ -0.58
PDLIM1-202ENST00000477757 PRELID3AQ96N28 172 aa11.41□□□□□ -0.58
PDLIM1-202ENST00000477757 SEC11AP67812 179 aa11.4□□□□□ -0.58
PDLIM1-202ENST00000477757 ALKAL2Q6UX46 152 aa11.4□□□□□ -0.58
PDLIM1-202ENST00000477757 PLEKHB2Q96CS7 222 aa11.4□□□□□ -0.58
PDLIM1-202ENST00000477757 SCO1O75880 301 aa11.39□□□□□ -0.59
PDLIM1-202ENST00000477757 FAM19A1Q7Z5A9 133 aa11.39□□□□□ -0.59
PDLIM1-202ENST00000477757 TMEM126AQ9H061 195 aa11.39□□□□□ -0.59
PDLIM1-202ENST00000477757 PRSS47A8MTI9 375 aa11.38□□□□□ -0.59
PDLIM1-202ENST00000477757 ADIRFQ15847 76 aa11.38□□□□□ -0.59
PDLIM1-202ENST00000477757 TMEM136Q6ZRR5 245 aa11.38□□□□□ -0.59
PDLIM1-202ENST00000477757 TCTE3Q8IZS6 198 aa11.38□□□□□ -0.59
PDLIM1-202ENST00000477757 IGIPA6NJ69 53 aa11.37□□□□□ -0.59
PDLIM1-202ENST00000477757 GEMIN7Q9H840 131 aaKnown RBP11.37□□□□□ -0.59
PDLIM1-202ENST00000477757 SMIM1B2RUZ4 78 aa11.36□□□□□ -0.59
PDLIM1-202ENST00000477757 TMEM238C9JI98 176 aa11.35□□□□□ -0.59
PDLIM1-202ENST00000477757 LOC389332A0A1B0GUA5 103 aa11.34□□□□□ -0.59
PDLIM1-202ENST00000477757 C4orf48Q5BLP8 95 aa11.34□□□□□ -0.59
PDLIM1-202ENST00000477757 COX7B2Q8TF08 81 aa11.34□□□□□ -0.59
PDLIM1-202ENST00000477757 GNB1LQ9BYB4 327 aa11.34□□□□□ -0.59
PDLIM1-202ENST00000477757 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
PDLIM1-202ENST00000477757 LAMTOR2Q9Y2Q5 125 aa11.34□□□□□ -0.59
PDLIM1-202ENST00000477757 M0R378 163 aa11.33□□□□□ -0.6
PDLIM1-202ENST00000477757 Q8N8P6 123 aa11.33□□□□□ -0.6
PDLIM1-202ENST00000477757 CFC1BP0CG36 223 aa11.32□□□□□ -0.6
PDLIM1-202ENST00000477757 RAB5BP61020 215 aa11.32□□□□□ -0.6
PDLIM1-202ENST00000477757 MT1HP80294 61 aa11.32□□□□□ -0.6
PDLIM1-202ENST00000477757 ORMDL2Q53FV1 153 aa11.32□□□□□ -0.6
PDLIM1-202ENST00000477757 PDZD11Q5EBL8 140 aa11.32□□□□□ -0.6
PDLIM1-202ENST00000477757 PAPPA-AS1Q5QFB9 102 aa11.32□□□□□ -0.6
PDLIM1-202ENST00000477757 CBLN2Q8IUK8 224 aa11.32□□□□□ -0.6
PDLIM1-202ENST00000477757 NAT8Q9UHE5 227 aa11.32□□□□□ -0.6
PDLIM1-202ENST00000477757 KRTAP19-2Q3LHN2 52 aa11.31□□□□□ -0.6
PDLIM1-202ENST00000477757 SPRR4Q96PI1 79 aa11.31□□□□□ -0.6
PDLIM1-202ENST00000477757 ATP5L2Q7Z4Y8 100 aa11.3□□□□□ -0.6
PDLIM1-202ENST00000477757 Q8NBF4 154 aa11.3□□□□□ -0.6
PDLIM1-202ENST00000477757 VPREB1P12018 145 aa11.29□□□□□ -0.6
PDLIM1-202ENST00000477757 HIGD2AQ9BW72 106 aa11.29□□□□□ -0.6
PDLIM1-202ENST00000477757 A0A1B0GVG6 124 aa11.28□□□□□ -0.6
PDLIM1-202ENST00000477757 K7EMI3 77 aa11.28□□□□□ -0.6
PDLIM1-202ENST00000477757 SPINK1P00995 79 aa11.28□□□□□ -0.6
PDLIM1-202ENST00000477757 XP32Q5T750 250 aa11.28□□□□□ -0.6
PDLIM1-202ENST00000477757 DAND5Q8N907 189 aa11.28□□□□□ -0.6
PDLIM1-202ENST00000477757 TIMM17AQ99595 171 aa11.28□□□□□ -0.6
PDLIM1-202ENST00000477757 IGLV5-45A0A087WSX0 123 aa11.27□□□□□ -0.61
PDLIM1-202ENST00000477757 NDUFA12Q9UI09 145 aa11.26□□□□□ -0.61
PDLIM1-202ENST00000477757 ZNF706Q9Y5V0 76 aaPredicted RBP11.25□□□□□ -0.61
PDLIM1-202ENST00000477757 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
PDLIM1-202ENST00000477757 LORP23490 312 aaPredicted RBP11.24□□□□□ -0.61
PDLIM1-202ENST00000477757 C9JQL5 133 aa11.23□□□□□ -0.61
PDLIM1-202ENST00000477757 ATP5LO75964 103 aa11.23□□□□□ -0.61
PDLIM1-202ENST00000477757 SPINK8P0C7L1 97 aa11.22□□□□□ -0.61
PDLIM1-202ENST00000477757 FAM19A2Q8N3H0 131 aa11.22□□□□□ -0.61
PDLIM1-202ENST00000477757 TOMM6Q96B49 74 aa11.22□□□□□ -0.61
PDLIM1-202ENST00000477757 SND1-IT1Q9HBX3 110 aa11.22□□□□□ -0.61
PDLIM1-202ENST00000477757 PFN2P35080 140 aa11.21□□□□□ -0.61
PDLIM1-202ENST00000477757 RPL24P83731 157 aaKnown RBP11.21□□□□□ -0.61
PDLIM1-202ENST00000477757 NXT2Q9NPJ8 142 aaKnown RBP11.21□□□□□ -0.61
PDLIM1-202ENST00000477757 G0S2P27469 103 aa11.2□□□□□ -0.62
PDLIM1-202ENST00000477757 KRTAP10-6P60371 365 aaPredicted RBP11.2□□□□□ -0.62
PDLIM1-202ENST00000477757 Q8NDZ9 215 aa11.2□□□□□ -0.62
PDLIM1-202ENST00000477757 RPS29P62273 56 aaKnown RBP11.19□□□□□ -0.62
PDLIM1-202ENST00000477757 Q8N377 158 aa11.19□□□□□ -0.62
PDLIM1-202ENST00000477757 ERASQ7Z444 233 aa11.18□□□□□ -0.62
PDLIM1-202ENST00000477757 RAB14P61106 215 aa11.16□□□□□ -0.62
PDLIM1-202ENST00000477757 SCGB3A1Q96QR1 104 aa11.15□□□□□ -0.62
PDLIM1-202ENST00000477757 ERG28Q9UKR5 140 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms