RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 BATFQ16520 125 aa8.04□□□□□ -1.12
PRPF39-203ENST00000477626 IGLL5B9A064 214 aa8.04□□□□□ -1.12
PRPF39-203ENST00000477626 Q8NDZ9 215 aa8.04□□□□□ -1.12
PRPF39-203ENST00000477626 TRAV8-4A0A0B4J246 113 aa8.04□□□□□ -1.12
PRPF39-203ENST00000477626 GCSHP23434 173 aa8.04□□□□□ -1.12
PRPF39-203ENST00000477626 CLPSL2Q6UWE3 100 aa8.04□□□□□ -1.12
PRPF39-203ENST00000477626 HIST1H4GQ99525 98 aa8.04□□□□□ -1.12
PRPF39-203ENST00000477626 SS18Q15532 418 aa8.03□□□□□ -1.12
PRPF39-203ENST00000477626 LINC00308Q8TCZ7 52 aa8.03□□□□□ -1.12
PRPF39-203ENST00000477626 TMEM238C9JI98 176 aa8.03□□□□□ -1.12
PRPF39-203ENST00000477626 ANGP03950 147 aaKnown RBP8.03□□□□□ -1.12
PRPF39-203ENST00000477626 XCL1P47992 114 aa8.03□□□□□ -1.12
PRPF39-203ENST00000477626 IBA57-AS1B1ANH7 110 aa8.03□□□□□ -1.12
PRPF39-203ENST00000477626 TSPAN13O95857 204 aa8.03□□□□□ -1.12
PRPF39-203ENST00000477626 A6NDN8 102 aa8.02□□□□□ -1.13
PRPF39-203ENST00000477626 C5orf38Q86SI9 138 aa8.02□□□□□ -1.13
PRPF39-203ENST00000477626 IGKV2-28A0A075B6P5 120 aa8.02□□□□□ -1.13
PRPF39-203ENST00000477626 A0A1W2PPM0 123 aa8.02□□□□□ -1.13
PRPF39-203ENST00000477626 A4D1N5 150 aa8.02□□□□□ -1.13
PRPF39-203ENST00000477626 IGKV2D-28P01615 120 aa8.02□□□□□ -1.13
PRPF39-203ENST00000477626 NTN5Q8WTR8 489 aaPredicted RBP8.02□□□□□ -1.13
PRPF39-203ENST00000477626 TMEM262E9PQX1 116 aa8.02□□□□□ -1.13
PRPF39-203ENST00000477626 IFITM1P13164 125 aa8.01□□□□□ -1.13
PRPF39-203ENST00000477626 KLK12Q9UKR0 248 aa8.01□□□□□ -1.13
PRPF39-203ENST00000477626 IGHV3-33P01772 117 aa8.01□□□□□ -1.13
PRPF39-203ENST00000477626 LINC01600Q96MT4 127 aa8.01□□□□□ -1.13
PRPF39-203ENST00000477626 SMIM13P0DJ93 91 aa8□□□□□ -1.13
PRPF39-203ENST00000477626 C10orf25Q5T742 122 aa8□□□□□ -1.13
PRPF39-203ENST00000477626 SFTA2Q6UW10 78 aa8□□□□□ -1.13
PRPF39-203ENST00000477626 NHP2Q9NX24 153 aaKnown RBP8□□□□□ -1.13
PRPF39-203ENST00000477626 GAGE12HA6NDE8 117 aa8□□□□□ -1.13
PRPF39-203ENST00000477626 COX7A2LO14548 114 aa8□□□□□ -1.13
PRPF39-203ENST00000477626 SCGB1D4Q6XE38 83 aa8□□□□□ -1.13
PRPF39-203ENST00000477626 PRO0461Q9UI25 63 aa8□□□□□ -1.13
PRPF39-203ENST00000477626 UBE2V1Q13404 147 aa7.99□□□□□ -1.13
PRPF39-203ENST00000477626 DAND5Q8N907 189 aa7.99□□□□□ -1.13
PRPF39-203ENST00000477626 COX17Q14061 63 aa7.98□□□□□ -1.13
PRPF39-203ENST00000477626 C2orf82Q6UX34 121 aa7.98□□□□□ -1.13
PRPF39-203ENST00000477626 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
PRPF39-203ENST00000477626 SLPIP03973 132 aa7.98□□□□□ -1.13
PRPF39-203ENST00000477626 C6orf223Q8N319 242 aa7.98□□□□□ -1.13
PRPF39-203ENST00000477626 K7EP34 96 aa7.97□□□□□ -1.13
PRPF39-203ENST00000477626 CASC10Q5T4H9 136 aa7.97□□□□□ -1.13
PRPF39-203ENST00000477626 Q6ZRN7 208 aaPredicted RBP7.97□□□□□ -1.13
PRPF39-203ENST00000477626 IGKV3OR2-268A0A0C4DH90 116 aa7.96□□□□□ -1.14
PRPF39-203ENST00000477626 CXCL5P42830 114 aa7.96□□□□□ -1.14
PRPF39-203ENST00000477626 C6orf48Q9UBA6 75 aa7.96□□□□□ -1.14
PRPF39-203ENST00000477626 ERG28Q9UKR5 140 aa7.96□□□□□ -1.14
PRPF39-203ENST00000477626 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
PRPF39-203ENST00000477626 H3BUT2 72 aa7.95□□□□□ -1.14
PRPF39-203ENST00000477626 CCL18P55774 89 aa7.95□□□□□ -1.14
PRPF39-203ENST00000477626 PRO1854Q9UHT4 67 aa7.94□□□□□ -1.14
PRPF39-203ENST00000477626 TGP01266 2768 aa7.94□□□□□ -1.14
PRPF39-203ENST00000477626 SRSF9Q13242 221 aaKnown RBP eCLIP7.94□□□□□ -1.14
PRPF39-203ENST00000477626 LINC00337Q8N6G1 96 aa7.94□□□□□ -1.14
PRPF39-203ENST00000477626 NAA38Q9BRA0 125 aaKnown RBP7.94□□□□□ -1.14
PRPF39-203ENST00000477626 F8WDY8 70 aa7.94□□□□□ -1.14
PRPF39-203ENST00000477626 RYR2Q92736 4967 aa7.93□□□□□ -1.14
PRPF39-203ENST00000477626 TRBV30A0A0K0K1B3 111 aa7.93□□□□□ -1.14
PRPF39-203ENST00000477626 TMEM238LA0A1B0GVL6 79 aa7.93□□□□□ -1.14
PRPF39-203ENST00000477626 A6NJY4 79 aa7.93□□□□□ -1.14
PRPF39-203ENST00000477626 MIR7-3HGQ8N6C7 128 aa7.93□□□□□ -1.14
PRPF39-203ENST00000477626 C2orf48Q96LS8 159 aa7.93□□□□□ -1.14
PRPF39-203ENST00000477626 MUC7Q8TAX7 377 aa7.93□□□□□ -1.14
PRPF39-203ENST00000477626 UNQ6190/PRO20217Q6UXQ8 127 aa7.92□□□□□ -1.14
PRPF39-203ENST00000477626 RAB37Q96AX2 223 aa7.92□□□□□ -1.14
PRPF39-203ENST00000477626 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.92□□□□□ -1.14
PRPF39-203ENST00000477626 PRSS2P07478 247 aa7.92□□□□□ -1.14
PRPF39-203ENST00000477626 C9orf116Q5BN46 136 aaPredicted RBP7.92□□□□□ -1.14
PRPF39-203ENST00000477626 UBE2WQ96B02 151 aa7.92□□□□□ -1.14
PRPF39-203ENST00000477626 PGPEP1Q9NXJ5 209 aa7.92□□□□□ -1.14
PRPF39-203ENST00000477626 SMCPP49901 116 aaPredicted RBP7.92□□□□□ -1.14
PRPF39-203ENST00000477626 KRTAP7-1Q8IUC3 87 aa7.92□□□□□ -1.14
PRPF39-203ENST00000477626 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
PRPF39-203ENST00000477626 NDUFC2O95298 119 aa7.91□□□□□ -1.14
PRPF39-203ENST00000477626 TLX1NBP0CAT3 122 aa7.91□□□□□ -1.14
PRPF39-203ENST00000477626 TRIAP1O43715 76 aa7.9□□□□□ -1.14
PRPF39-203ENST00000477626 SPAG11BQ08648 103 aa7.9□□□□□ -1.14
PRPF39-203ENST00000477626 WFDC2Q14508 124 aa7.9□□□□□ -1.14
PRPF39-203ENST00000477626 SND1-IT1Q9HBX3 110 aa7.9□□□□□ -1.14
PRPF39-203ENST00000477626 NUPR2A6NF83 97 aa7.9□□□□□ -1.15
PRPF39-203ENST00000477626 RNF151Q2KHN1 245 aa7.9□□□□□ -1.15
PRPF39-203ENST00000477626 C22orf24Q9Y442 160 aa7.9□□□□□ -1.15
PRPF39-203ENST00000477626 LRCOL1A6NCL2 159 aa7.89□□□□□ -1.15
PRPF39-203ENST00000477626 MEIG1Q5JSS6 88 aa7.89□□□□□ -1.15
PRPF39-203ENST00000477626 KMT2CQ8NEZ4 4911 aaKnown RBP7.88□□□□□ -1.15
PRPF39-203ENST00000477626 M0QXV9 152 aa7.88□□□□□ -1.15
PRPF39-203ENST00000477626 Q6ZR54 194 aa7.88□□□□□ -1.15
PRPF39-203ENST00000477626 LINC00526Q96FQ7 95 aa7.88□□□□□ -1.15
PRPF39-203ENST00000477626 TCL1BO95988 128 aa7.88□□□□□ -1.15
PRPF39-203ENST00000477626 Q6ZRU5 148 aa7.88□□□□□ -1.15
PRPF39-203ENST00000477626 NPC2P61916 151 aa7.87□□□□□ -1.15
PRPF39-203ENST00000477626 CIRBPQ14011 172 aaKnown RBP7.87□□□□□ -1.15
PRPF39-203ENST00000477626 C6orf226Q5I0X4 101 aa7.87□□□□□ -1.15
PRPF39-203ENST00000477626 APOMO95445 188 aa7.87□□□□□ -1.15
PRPF39-203ENST00000477626 EPM2AB3EWF7 344 aa7.86□□□□□ -1.15
PRPF39-203ENST00000477626 CRPP02741 224 aa7.86□□□□□ -1.15
PRPF39-203ENST00000477626 RPL28P46779 137 aaKnown RBP7.86□□□□□ -1.15
PRPF39-203ENST00000477626 TOMM7Q9P0U1 55 aa7.86□□□□□ -1.15
PRPF39-203ENST00000477626 IGLV6-57P01721 117 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms