RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 KRTAP19-2Q3LHN2 52 aa5.54□□□□□ -1.52
COL4A5-204ENST00000477429 C3orf22Q8N5N4 141 aa5.54□□□□□ -1.52
COL4A5-204ENST00000477429 PACRGQ96M98 296 aaPredicted RBP5.54□□□□□ -1.52
COL4A5-204ENST00000477429 C20orf78Q9BR46 151 aa5.54□□□□□ -1.52
COL4A5-204ENST00000477429 LINC01547P58512 204 aaPredicted RBP5.53□□□□□ -1.52
COL4A5-204ENST00000477429 SMAGPQ0VAQ4 97 aa5.53□□□□□ -1.52
COL4A5-204ENST00000477429 RIGQ13278 110 aa5.53□□□□□ -1.52
COL4A5-204ENST00000477429 RGS21Q2M5E4 152 aa5.53□□□□□ -1.52
COL4A5-204ENST00000477429 KRTAP13-3Q3SY46 172 aa5.53□□□□□ -1.52
COL4A5-204ENST00000477429 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
COL4A5-204ENST00000477429 TMEM18Q96B42 140 aa5.53□□□□□ -1.52
COL4A5-204ENST00000477429 OSTCQ9NRP0 149 aa5.53□□□□□ -1.52
COL4A5-204ENST00000477429 TOMM7Q9P0U1 55 aa5.53□□□□□ -1.52
COL4A5-204ENST00000477429 D6R8Y8 96 aa5.52□□□□□ -1.53
COL4A5-204ENST00000477429 PPP1R2P9O14990 202 aa5.52□□□□□ -1.53
COL4A5-204ENST00000477429 LBHQ53QV2 105 aaPredicted RBP5.52□□□□□ -1.53
COL4A5-204ENST00000477429 PPP1R17O96001 155 aa5.51□□□□□ -1.53
COL4A5-204ENST00000477429 CKS2P33552 79 aa5.51□□□□□ -1.53
COL4A5-204ENST00000477429 TAGLN2P37802 199 aaKnown RBP5.51□□□□□ -1.53
COL4A5-204ENST00000477429 FAM229BQ4G0N7 80 aa5.51□□□□□ -1.53
COL4A5-204ENST00000477429 SMIM7Q9BQ49 75 aa5.51□□□□□ -1.53
COL4A5-204ENST00000477429 TP73-AS1Q9UF72 201 aa5.51□□□□□ -1.53
COL4A5-204ENST00000477429 LINC00862A6NCI5 91 aa5.5□□□□□ -1.53
COL4A5-204ENST00000477429 PRLHP81277 87 aa5.5□□□□□ -1.53
COL4A5-204ENST00000477429 PET117Q6UWS5 81 aa5.5□□□□□ -1.53
COL4A5-204ENST00000477429 EIF5A2Q9GZV4 153 aaKnown RBP5.5□□□□□ -1.53
COL4A5-204ENST00000477429 PYGO1Q9Y3Y4 419 aa5.5□□□□□ -1.53
COL4A5-204ENST00000477429 SMIM27A0A1W2PRY6 76 aa5.49□□□□□ -1.53
COL4A5-204ENST00000477429 A4D1N5 150 aa5.49□□□□□ -1.53
COL4A5-204ENST00000477429 SRP19P09132 144 aaKnown RBP5.49□□□□□ -1.53
COL4A5-204ENST00000477429 PNRC1Q12796 327 aaPredicted RBP5.49□□□□□ -1.53
COL4A5-204ENST00000477429 FAM74A3Q4VXF1 159 aa5.49□□□□□ -1.53
COL4A5-204ENST00000477429 LINC01561Q8N1V8 128 aa5.49□□□□□ -1.53
COL4A5-204ENST00000477429 TMEM141Q96I45 108 aa5.49□□□□□ -1.53
COL4A5-204ENST00000477429 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
COL4A5-204ENST00000477429 IGKV2-28A0A075B6P5 120 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 A0A1B0GXF2 115 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 C9JQL5 133 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 IGKV2D-28P01615 120 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 IFI27P40305 119 aaPredicted RBP5.48□□□□□ -1.53
COL4A5-204ENST00000477429 UBE2AP49459 152 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 CKS1BP61024 79 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 MT1HP80294 61 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 C6orf226Q5I0X4 101 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 MRPL54Q6P161 138 aaKnown RBP5.48□□□□□ -1.53
COL4A5-204ENST00000477429 ALKAL2Q6UX46 152 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 Q6ZN92 141 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 SLC51BQ86UW2 128 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 Q8IZM0 81 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 AMELXQ99217 191 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 ALKBH7Q9BT30 221 aaPredicted RBP5.48□□□□□ -1.53
COL4A5-204ENST00000477429 CDKN2A-AS1Q9UH64 79 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 NAT8BQ9UHF3 227 aa5.48□□□□□ -1.53
COL4A5-204ENST00000477429 IGLV5-37A0A075B6J1 123 aa5.47□□□□□ -1.53
COL4A5-204ENST00000477429 IGKV2D-26A0A0A0MRZ7 120 aa5.47□□□□□ -1.53
COL4A5-204ENST00000477429 TMEM238C9JI98 176 aa5.47□□□□□ -1.53
COL4A5-204ENST00000477429 PRSS2P07478 247 aa5.47□□□□□ -1.53
COL4A5-204ENST00000477429 RPL23P62829 140 aaKnown RBP5.47□□□□□ -1.53
COL4A5-204ENST00000477429 Q8NDZ9 215 aa5.47□□□□□ -1.53
COL4A5-204ENST00000477429 F8VRH5 84 aa5.46□□□□□ -1.54
COL4A5-204ENST00000477429 KRTAP20-1Q3LI63 56 aa5.46□□□□□ -1.54
COL4A5-204ENST00000477429 C2orf66Q6UXQ4 117 aa5.46□□□□□ -1.54
COL4A5-204ENST00000477429 TEX43Q6ZNM6 134 aa5.46□□□□□ -1.54
COL4A5-204ENST00000477429 FAM19A3Q7Z5A8 133 aa5.46□□□□□ -1.54
COL4A5-204ENST00000477429 PLEKHB2Q96CS7 222 aa5.46□□□□□ -1.54
COL4A5-204ENST00000477429 LOC389332A0A1B0GUA5 103 aa5.45□□□□□ -1.54
COL4A5-204ENST00000477429 IGIPA6NJ69 53 aa5.45□□□□□ -1.54
COL4A5-204ENST00000477429 DAND5Q8N907 189 aa5.45□□□□□ -1.54
COL4A5-204ENST00000477429 RAB5BP61020 215 aa5.44□□□□□ -1.54
COL4A5-204ENST00000477429 SMIM1B2RUZ4 78 aa5.43□□□□□ -1.54
COL4A5-204ENST00000477429 M0R378 163 aa5.43□□□□□ -1.54
COL4A5-204ENST00000477429 RAB5AP20339 215 aa5.43□□□□□ -1.54
COL4A5-204ENST00000477429 ADIRFQ15847 76 aa5.43□□□□□ -1.54
COL4A5-204ENST00000477429 TMEM136Q6ZRR5 245 aa5.43□□□□□ -1.54
COL4A5-204ENST00000477429 LINC00337Q8N6G1 96 aa5.43□□□□□ -1.54
COL4A5-204ENST00000477429 PRELID3AQ96N28 172 aa5.43□□□□□ -1.54
COL4A5-204ENST00000477429 TMEM126AQ9H061 195 aa5.43□□□□□ -1.54
COL4A5-204ENST00000477429 FP248Q71RG6 208 aaPredicted RBP5.42□□□□□ -1.54
COL4A5-204ENST00000477429 FAM19A1Q7Z5A9 133 aa5.42□□□□□ -1.54
COL4A5-204ENST00000477429 TCTE3Q8IZS6 198 aa5.42□□□□□ -1.54
COL4A5-204ENST00000477429 VCX2Q9H322 139 aa5.42□□□□□ -1.54
COL4A5-204ENST00000477429 VPREB1P12018 145 aa5.41□□□□□ -1.54
COL4A5-204ENST00000477429 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
COL4A5-204ENST00000477429 CTAG1AP78358 180 aa5.41□□□□□ -1.54
COL4A5-204ENST00000477429 ORMDL3Q8N138 153 aa5.41□□□□□ -1.54
COL4A5-204ENST00000477429 Q8NBF4 154 aa5.41□□□□□ -1.54
COL4A5-204ENST00000477429 C2orf88Q9BSF0 95 aa5.41□□□□□ -1.54
COL4A5-204ENST00000477429 CYSLTR1Q9Y271 337 aa5.41□□□□□ -1.54
COL4A5-204ENST00000477429 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
COL4A5-204ENST00000477429 A0A1B0GW15 77 aa5.4□□□□□ -1.54
COL4A5-204ENST00000477429 PPBPP02775 128 aa5.4□□□□□ -1.54
COL4A5-204ENST00000477429 SEC61BP60468 96 aaKnown RBP5.4□□□□□ -1.54
COL4A5-204ENST00000477429 NKAPP1Q8N9T2 125 aa5.4□□□□□ -1.54
COL4A5-204ENST00000477429 COX7B2Q8TF08 81 aa5.4□□□□□ -1.54
COL4A5-204ENST00000477429 SPRR4Q96PI1 79 aa5.4□□□□□ -1.54
COL4A5-204ENST00000477429 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
COL4A5-204ENST00000477429 F8W036 122 aa5.39□□□□□ -1.55
COL4A5-204ENST00000477429 SPINK8P0C7L1 97 aa5.39□□□□□ -1.55
COL4A5-204ENST00000477429 ADCYAP1P18509 176 aa5.39□□□□□ -1.55
COL4A5-204ENST00000477429 XP32Q5T750 250 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms