RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 TRAPPC1Q9Y5R8 145 aa11.83□□□□□ -0.52
GMDS-204ENST00000476972 PRSS2P07478 247 aa11.82□□□□□ -0.52
GMDS-204ENST00000476972 TOMM7Q9P0U1 55 aa11.82□□□□□ -0.52
GMDS-204ENST00000476972 GAGE2EQ4V326 116 aa11.81□□□□□ -0.52
GMDS-204ENST00000476972 PACRGQ96M98 296 aaPredicted RBP11.81□□□□□ -0.52
GMDS-204ENST00000476972 GAGE2DQ9UEU5 116 aa11.81□□□□□ -0.52
GMDS-204ENST00000476972 Q8IZM0 81 aa11.8□□□□□ -0.52
GMDS-204ENST00000476972 C18orf32Q8TCD1 76 aa11.8□□□□□ -0.52
GMDS-204ENST00000476972 FAM168BA1KXE4 195 aa11.79□□□□□ -0.52
GMDS-204ENST00000476972 PHF5AQ7RTV0 110 aaKnown RBP11.79□□□□□ -0.52
GMDS-204ENST00000476972 LINC00469Q8N7U9 141 aa11.79□□□□□ -0.52
GMDS-204ENST00000476972 URB1-AS1Q96HZ7 61 aa11.79□□□□□ -0.52
GMDS-204ENST00000476972 TINCRA0A1B0GVN0 87 aa11.78□□□□□ -0.52
GMDS-204ENST00000476972 NDUFC2-KCTD14E9PQ53 114 aa11.78□□□□□ -0.52
GMDS-204ENST00000476972 CKS1BP61024 79 aa11.78□□□□□ -0.52
GMDS-204ENST00000476972 C6orf226Q5I0X4 101 aa11.78□□□□□ -0.52
GMDS-204ENST00000476972 LINC01600Q96MT4 127 aa11.78□□□□□ -0.52
GMDS-204ENST00000476972 CST9LQ9H4G1 147 aa11.78□□□□□ -0.52
GMDS-204ENST00000476972 IGLV5-45A0A087WSX0 123 aa11.77□□□□□ -0.53
GMDS-204ENST00000476972 A0A096LNJ9 63 aa11.77□□□□□ -0.53
GMDS-204ENST00000476972 SMIM1B2RUZ4 78 aa11.77□□□□□ -0.53
GMDS-204ENST00000476972 PMVKQ15126 192 aa11.77□□□□□ -0.53
GMDS-204ENST00000476972 FAM19A5Q7Z5A7 132 aaPredicted RBP11.77□□□□□ -0.53
GMDS-204ENST00000476972 ODF1Q14990 250 aa11.76□□□□□ -0.53
GMDS-204ENST00000476972 YPEL4Q96NS1 127 aa11.76□□□□□ -0.53
GMDS-204ENST00000476972 PSORS1C2Q9UIG4 136 aa11.76□□□□□ -0.53
GMDS-204ENST00000476972 LINC00614P0C842 121 aa11.75□□□□□ -0.53
GMDS-204ENST00000476972 C9orf129Q5T035 196 aaKnown RBP11.74□□□□□ -0.53
GMDS-204ENST00000476972 SPINK6Q6UWN8 80 aa11.74□□□□□ -0.53
GMDS-204ENST00000476972 KRTAP7-1Q8IUC3 87 aa11.74□□□□□ -0.53
GMDS-204ENST00000476972 F8VRH5 84 aa11.73□□□□□ -0.53
GMDS-204ENST00000476972 HBDP02042 147 aa11.73□□□□□ -0.53
GMDS-204ENST00000476972 PMCHL1Q16048 86 aa11.73□□□□□ -0.53
GMDS-204ENST00000476972 PDZD11Q5EBL8 140 aa11.73□□□□□ -0.53
GMDS-204ENST00000476972 CXCL5P42830 114 aa11.72□□□□□ -0.53
GMDS-204ENST00000476972 SRSF9Q13242 221 aaKnown RBP eCLIP11.72□□□□□ -0.53
GMDS-204ENST00000476972 M0QXV9 152 aa11.71□□□□□ -0.53
GMDS-204ENST00000476972 SPINK8P0C7L1 97 aa11.71□□□□□ -0.53
GMDS-204ENST00000476972 COX7B2Q8TF08 81 aa11.71□□□□□ -0.53
GMDS-204ENST00000476972 IGLC3P0DOY3 106 aa11.7□□□□□ -0.54
GMDS-204ENST00000476972 RAB5BP61020 215 aa11.7□□□□□ -0.54
GMDS-204ENST00000476972 C1orf137Q5JT78 98 aa11.7□□□□□ -0.54
GMDS-204ENST00000476972 KRTAP11-1Q8IUC1 163 aa11.7□□□□□ -0.54
GMDS-204ENST00000476972 CBLN2Q8IUK8 224 aa11.7□□□□□ -0.54
GMDS-204ENST00000476972 NDUFA6P56556 154 aa11.69□□□□□ -0.54
GMDS-204ENST00000476972 KRTAP10-8P60410 259 aa11.69□□□□□ -0.54
GMDS-204ENST00000476972 REG3GQ6UW15 175 aa11.68□□□□□ -0.54
GMDS-204ENST00000476972 H3BRM9 83 aa11.67□□□□□ -0.54
GMDS-204ENST00000476972 XAGE1AQ9HD64 81 aa11.67□□□□□ -0.54
GMDS-204ENST00000476972 ATP5LO75964 103 aa11.66□□□□□ -0.54
GMDS-204ENST00000476972 ZNF22P17026 224 aaPredicted RBP11.65□□□□□ -0.54
GMDS-204ENST00000476972 UBE2BP63146 152 aa11.65□□□□□ -0.54
GMDS-204ENST00000476972 IGLV7-43P04211 117 aa11.64□□□□□ -0.55
GMDS-204ENST00000476972 SLC7A5P1Q8MH63 180 aa11.64□□□□□ -0.55
GMDS-204ENST00000476972 CHCHD1Q96BP2 118 aaKnown RBP11.63□□□□□ -0.55
GMDS-204ENST00000476972 IGLV5-39A0A0G2JS06 123 aa11.62□□□□□ -0.55
GMDS-204ENST00000476972 BAGE3Q86Y29 109 aa11.62□□□□□ -0.55
GMDS-204ENST00000476972 C11orf86A6NJI1 115 aa11.61□□□□□ -0.55
GMDS-204ENST00000476972 C22orf24Q9Y442 160 aa11.61□□□□□ -0.55
GMDS-204ENST00000476972 TRGC2P03986 189 aa11.58□□□□□ -0.56
GMDS-204ENST00000476972 TMEM170BQ5T4T1 132 aa11.58□□□□□ -0.56
GMDS-204ENST00000476972 DIRC1Q969H9 104 aa11.58□□□□□ -0.56
GMDS-204ENST00000476972 IFI27L1Q96BM0 104 aa11.58□□□□□ -0.56
GMDS-204ENST00000476972 TP73-AS1Q9UF72 201 aa11.57□□□□□ -0.56
GMDS-204ENST00000476972 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
GMDS-204ENST00000476972 HSBP1O75506 76 aa11.56□□□□□ -0.56
GMDS-204ENST00000476972 LBHQ53QV2 105 aaPredicted RBP11.56□□□□□ -0.56
GMDS-204ENST00000476972 MRPL55Q7Z7F7 128 aaKnown RBP11.56□□□□□ -0.56
GMDS-204ENST00000476972 TRAV12-1A0A0B4J245 112 aa11.55□□□□□ -0.56
GMDS-204ENST00000476972 H0Y9J4 135 aa11.55□□□□□ -0.56
GMDS-204ENST00000476972 FAM19A2Q8N3H0 131 aa11.55□□□□□ -0.56
GMDS-204ENST00000476972 PFN2P35080 140 aa11.54□□□□□ -0.56
GMDS-204ENST00000476972 NUPR1O60356 82 aa11.52□□□□□ -0.57
GMDS-204ENST00000476972 LINC00310P59036 64 aa11.52□□□□□ -0.57
GMDS-204ENST00000476972 ERG28Q9UKR5 140 aa11.52□□□□□ -0.57
GMDS-204ENST00000476972 LPAP08519 4548 aa11.52□□□□□ -0.57
GMDS-204ENST00000476972 IGLV5-37A0A075B6J1 123 aa11.51□□□□□ -0.57
GMDS-204ENST00000476972 SERF1AO75920 110 aa11.51□□□□□ -0.57
GMDS-204ENST00000476972 ZNF625Q96I27 306 aaPredicted RBP11.51□□□□□ -0.57
GMDS-204ENST00000476972 LINC00167Q96N53 147 aa11.51□□□□□ -0.57
GMDS-204ENST00000476972 TMEM223A0PJW6 202 aa11.5□□□□□ -0.57
GMDS-204ENST00000476972 COLCA2A8K830 154 aa11.5□□□□□ -0.57
GMDS-204ENST00000476972 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
GMDS-204ENST00000476972 SFTA2Q6UW10 78 aa11.49□□□□□ -0.57
GMDS-204ENST00000476972 NKAPP1Q8N9T2 125 aa11.49□□□□□ -0.57
GMDS-204ENST00000476972 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
GMDS-204ENST00000476972 RPL37AP8A6NKH3 93 aa11.48□□□□□ -0.57
GMDS-204ENST00000476972 ZNF861PO60384 105 aa11.48□□□□□ -0.57
GMDS-204ENST00000476972 COX17Q14061 63 aa11.48□□□□□ -0.57
GMDS-204ENST00000476972 H0Y8G0 127 aa11.47□□□□□ -0.57
GMDS-204ENST00000476972 KRTAP1-4P0C5Y4 121 aa11.47□□□□□ -0.57
GMDS-204ENST00000476972 PRR26Q8N8Z3 221 aa11.47□□□□□ -0.57
GMDS-204ENST00000476972 BCE1O60756 84 aa11.46□□□□□ -0.57
GMDS-204ENST00000476972 SCO1O75880 301 aa11.46□□□□□ -0.57
GMDS-204ENST00000476972 LEPROTL1O95214 131 aa11.46□□□□□ -0.57
GMDS-204ENST00000476972 VPREB1P12018 145 aa11.45□□□□□ -0.58
GMDS-204ENST00000476972 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
GMDS-204ENST00000476972 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
GMDS-204ENST00000476972 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
GMDS-204ENST00000476972 Q8NDZ9 215 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms