RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ALKBH7Q9BT30 221 aaPredicted RBP8.33□□□□□ -1.08
SMG5-204ENST00000476954 TMEM126AQ9H061 195 aa8.33□□□□□ -1.08
SMG5-204ENST00000476954 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
SMG5-204ENST00000476954 IGLV4-3A0A075B6K6 122 aa8.32□□□□□ -1.08
SMG5-204ENST00000476954 HIGD1CA8MV81 97 aa8.32□□□□□ -1.08
SMG5-204ENST00000476954 PPP1R2P9O14990 202 aa8.32□□□□□ -1.08
SMG5-204ENST00000476954 TCAPO15273 167 aa8.32□□□□□ -1.08
SMG5-204ENST00000476954 PPP1R17O96001 155 aa8.32□□□□□ -1.08
SMG5-204ENST00000476954 Q6ZN92 141 aa8.32□□□□□ -1.08
SMG5-204ENST00000476954 KRTAP19-1Q8IUB9 90 aa8.32□□□□□ -1.08
SMG5-204ENST00000476954 Q8IZM0 81 aa8.32□□□□□ -1.08
SMG5-204ENST00000476954 HIGD2AQ9BW72 106 aa8.32□□□□□ -1.08
SMG5-204ENST00000476954 F8VRH5 84 aa8.31□□□□□ -1.08
SMG5-204ENST00000476954 SMLR1H3BR10 107 aa8.31□□□□□ -1.08
SMG5-204ENST00000476954 MRPL51Q4U2R6 128 aaKnown RBP8.31□□□□□ -1.08
SMG5-204ENST00000476954 COX6B2Q6YFQ2 88 aa8.3□□□□□ -1.08
SMG5-204ENST00000476954 M0R378 163 aa8.29□□□□□ -1.08
SMG5-204ENST00000476954 FAM231DQ6ZW35 169 aa8.29□□□□□ -1.08
SMG5-204ENST00000476954 C20orf78Q9BR46 151 aa8.29□□□□□ -1.08
SMG5-204ENST00000476954 SMIM2Q9BVW6 85 aa8.29□□□□□ -1.08
SMG5-204ENST00000476954 IFI27P40305 119 aaPredicted RBP8.28□□□□□ -1.08
SMG5-204ENST00000476954 CT83Q5H943 113 aa8.28□□□□□ -1.08
SMG5-204ENST00000476954 TMEM141Q96I45 108 aa8.27□□□□□ -1.09
SMG5-204ENST00000476954 TRBV24-1A0A075B6N3 115 aa8.26□□□□□ -1.09
SMG5-204ENST00000476954 RAB5BP61020 215 aa8.26□□□□□ -1.09
SMG5-204ENST00000476954 FAM19A2Q8N3H0 131 aa8.26□□□□□ -1.09
SMG5-204ENST00000476954 EIF5A2Q9GZV4 153 aaKnown RBP8.26□□□□□ -1.09
SMG5-204ENST00000476954 FAM104BQ5XKR9 115 aa8.25□□□□□ -1.09
SMG5-204ENST00000476954 TEX43Q6ZNM6 134 aa8.25□□□□□ -1.09
SMG5-204ENST00000476954 GNB1LQ9BYB4 327 aa8.25□□□□□ -1.09
SMG5-204ENST00000476954 PYGO1Q9Y3Y4 419 aa8.25□□□□□ -1.09
SMG5-204ENST00000476954 SLC25A20O43772 301 aa8.24□□□□□ -1.09
SMG5-204ENST00000476954 RIGQ13278 110 aa8.24□□□□□ -1.09
SMG5-204ENST00000476954 NPYP01303 97 aa8.23□□□□□ -1.09
SMG5-204ENST00000476954 CKS2P33552 79 aa8.23□□□□□ -1.09
SMG5-204ENST00000476954 ZNF345Q14585 488 aa8.23□□□□□ -1.09
SMG5-204ENST00000476954 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
SMG5-204ENST00000476954 C9orf92A6NGG3 77 aa8.22□□□□□ -1.09
SMG5-204ENST00000476954 LINC00862A6NCI5 91 aa8.21□□□□□ -1.1
SMG5-204ENST00000476954 TEX46H3BTG2 121 aa8.21□□□□□ -1.1
SMG5-204ENST00000476954 VPREB1P12018 145 aa8.21□□□□□ -1.1
SMG5-204ENST00000476954 C2orf88Q9BSF0 95 aa8.21□□□□□ -1.1
SMG5-204ENST00000476954 KANTRA0A1W2PQU2 76 aa8.2□□□□□ -1.1
SMG5-204ENST00000476954 RPS29P62273 56 aaKnown RBP8.2□□□□□ -1.1
SMG5-204ENST00000476954 Q8NDZ9 215 aa8.2□□□□□ -1.1
SMG5-204ENST00000476954 KRTAP9-8Q9BYQ0 159 aa8.2□□□□□ -1.1
SMG5-204ENST00000476954 D6R8Y8 96 aa8.19□□□□□ -1.1
SMG5-204ENST00000476954 CXCL5P42830 114 aa8.19□□□□□ -1.1
SMG5-204ENST00000476954 MOBPQ13875 183 aa8.19□□□□□ -1.1
SMG5-204ENST00000476954 AMELXQ99217 191 aa8.19□□□□□ -1.1
SMG5-204ENST00000476954 ZNF706Q9Y5V0 76 aaPredicted RBP8.19□□□□□ -1.1
SMG5-204ENST00000476954 C2orf66Q6UXQ4 117 aa8.18□□□□□ -1.1
SMG5-204ENST00000476954 CFC1P0CG37 223 aa8.17□□□□□ -1.1
SMG5-204ENST00000476954 FAM19A3Q7Z5A8 133 aa8.17□□□□□ -1.1
SMG5-204ENST00000476954 IGLV9-49A0A0B4J1Y8 123 aa8.16□□□□□ -1.1
SMG5-204ENST00000476954 RAB5AP20339 215 aa8.16□□□□□ -1.1
SMG5-204ENST00000476954 CEBPGP53567 150 aa8.16□□□□□ -1.1
SMG5-204ENST00000476954 COX7B2Q8TF08 81 aa8.16□□□□□ -1.1
SMG5-204ENST00000476954 VCX2Q9H322 139 aa8.16□□□□□ -1.1
SMG5-204ENST00000476954 V9GYV3 84 aa8.16□□□□□ -1.1
SMG5-204ENST00000476954 SMIM1B2RUZ4 78 aa8.15□□□□□ -1.1
SMG5-204ENST00000476954 OSTCQ9NRP0 149 aa8.15□□□□□ -1.1
SMG5-204ENST00000476954 LCE2BO14633 110 aa8.14□□□□□ -1.11
SMG5-204ENST00000476954 HERVK_113P63121 156 aa8.14□□□□□ -1.11
SMG5-204ENST00000476954 LINC01551Q86U37 167 aa8.14□□□□□ -1.11
SMG5-204ENST00000476954 SMCR5Q8TEV8 140 aa8.14□□□□□ -1.11
SMG5-204ENST00000476954 PFN2P35080 140 aa8.13□□□□□ -1.11
SMG5-204ENST00000476954 LINC00483Q53H64 154 aa8.13□□□□□ -1.11
SMG5-204ENST00000476954 HMSDA8MTL9 139 aa8.12□□□□□ -1.11
SMG5-204ENST00000476954 RAB14P61106 215 aa8.12□□□□□ -1.11
SMG5-204ENST00000476954 GAGE2AQ6NT46 116 aa8.12□□□□□ -1.11
SMG5-204ENST00000476954 GEMIN7Q9H840 131 aaKnown RBP8.12□□□□□ -1.11
SMG5-204ENST00000476954 LOC389332A0A1B0GUA5 103 aa8.11□□□□□ -1.11
SMG5-204ENST00000476954 TMEM250H0YL14 139 aa8.11□□□□□ -1.11
SMG5-204ENST00000476954 TAGLN2P37802 199 aaKnown RBP8.11□□□□□ -1.11
SMG5-204ENST00000476954 SSBP3-AS1Q7Z2R9 100 aa8.11□□□□□ -1.11
SMG5-204ENST00000476954 SND1-IT1Q9HBX3 110 aa8.11□□□□□ -1.11
SMG5-204ENST00000476954 NAT8BQ9UHF3 227 aa8.11□□□□□ -1.11
SMG5-204ENST00000476954 CYSLTR1Q9Y271 337 aa8.1□□□□□ -1.11
SMG5-204ENST00000476954 IGIPA6NJ69 53 aa8.09□□□□□ -1.11
SMG5-204ENST00000476954 FAM74A3Q4VXF1 159 aa8.09□□□□□ -1.11
SMG5-204ENST00000476954 PDZD11Q5EBL8 140 aa8.09□□□□□ -1.11
SMG5-204ENST00000476954 RPL24P83731 157 aaKnown RBP8.08□□□□□ -1.12
SMG5-204ENST00000476954 AKAP14Q86UN6 197 aa8.08□□□□□ -1.12
SMG5-204ENST00000476954 SMIM7Q9BQ49 75 aa8.08□□□□□ -1.12
SMG5-204ENST00000476954 NEBP20929 6669 aa8.07□□□□□ -1.12
SMG5-204ENST00000476954 SPINK8P0C7L1 97 aa8.07□□□□□ -1.12
SMG5-204ENST00000476954 SEC11AP67812 179 aa8.07□□□□□ -1.12
SMG5-204ENST00000476954 MRPL54Q6P161 138 aaKnown RBP8.07□□□□□ -1.12
SMG5-204ENST00000476954 Q6Q795 121 aa8.07□□□□□ -1.12
SMG5-204ENST00000476954 TIMM17AQ99595 171 aa8.07□□□□□ -1.12
SMG5-204ENST00000476954 PRELID3AQ96N28 172 aa8.06□□□□□ -1.12
SMG5-204ENST00000476954 IGLV6-57P01721 117 aa8.05□□□□□ -1.12
SMG5-204ENST00000476954 KRTAP6-3Q3LI67 103 aa8.05□□□□□ -1.12
SMG5-204ENST00000476954 TMEM136Q6ZRR5 245 aa8.05□□□□□ -1.12
SMG5-204ENST00000476954 SMIM27A0A1W2PRY6 76 aa8.04□□□□□ -1.12
SMG5-204ENST00000476954 ATP5LO75964 103 aa8.04□□□□□ -1.12
SMG5-204ENST00000476954 ERC2-IT1O76042 136 aa8.04□□□□□ -1.12
SMG5-204ENST00000476954 PPBPP02775 128 aa8.04□□□□□ -1.12
SMG5-204ENST00000476954 NPSP0C0P6 89 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms