RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 SIPA1L3O60292 1781 aaPredicted RBP0.74□□□□□ -2.29
NPHP3-207ENST00000476742 XRN1Q8IZH2 1706 aaKnown RBP0.74□□□□□ -2.29
NPHP3-207ENST00000476742 TET3O43151 1660 aa0.74□□□□□ -2.29
NPHP3-207ENST00000476742 RNF17Q9BXT8 1623 aaKnown RBP0.74□□□□□ -2.29
NPHP3-207ENST00000476742 PCDH15Q96QU1 1955 aa0.74□□□□□ -2.29
NPHP3-207ENST00000476742 CPS1P31327 1500 aa0.74□□□□□ -2.29
NPHP3-207ENST00000476742 HMGXB3Q12766 1538 aa0.74□□□□□ -2.29
NPHP3-207ENST00000476742 EHBP1L1Q8N3D4 1523 aa0.74□□□□□ -2.29
NPHP3-207ENST00000476742 FN1P02751 2386 aaKnown RBP0.74□□□□□ -2.29
NPHP3-207ENST00000476742 C1orf167Q5SNV9 1468 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 ALPK2Q86TB3 2170 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 KDM3BQ7LBC6 1761 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 ARFGEF2Q9Y6D5 1785 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 NRXN2Q9P2S2 1712 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 TRGV1A0A0A0MS02 117 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 TRAV21A0A0B4J279 112 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 TRBV7-4A0A0J9YYF1 115 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 CLPSL1A2RUU4 121 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 ACYP2P14621 99 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 PLNP26678 52 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 FXYD3Q14802 87 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 NREPQ16612 68 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 Q6ZQY7 126 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 PIK3C2BO00750 1634 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 TARBP1Q13395 1621 aaKnown RBP0.73□□□□□ -2.29
NPHP3-207ENST00000476742 SHROOM2Q13796 1616 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 CEP192Q8TEP8 1941 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 UNC13CQ8NB66 2214 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 CUL9Q8IWT3 2517 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 MRC1P22897 1456 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 RALGAPBQ86X10 1494 aa0.73□□□□□ -2.29
NPHP3-207ENST00000476742 ANKRD50Q9ULJ7 1429 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 CFAP43Q8NDM7 1665 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 SDK1Q7Z5N4 2213 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 ANKRD36A6QL64 1941 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 UBR3Q6ZT12 1888 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 ADGRB2O60241 1585 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 UGGT1Q9NYU2 1555 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.72□□□□□ -2.29
NPHP3-207ENST00000476742 LOC110117498A0A087WWA1 95 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 TRBV6-1A0A0K0K1D8 114 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 C10orf142B7Z368 130 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 K7EMI3 77 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 M0R2N4 97 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 INE1O15225 51 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 ZNF137PP52743 207 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 GDF5OSQ5U4N7 250 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 SPATA8Q6RVD6 105 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 ENHOQ6UWT2 76 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 UNQ6190/PRO20217Q6UXQ8 127 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 DEFB132Q7Z7B7 95 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 C5orf56Q8N8D9 126 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 TET1Q8NFU7 2136 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 SPRR4Q96PI1 79 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 CDK13Q14004 1512 aaKnown RBP0.72□□□□□ -2.29
NPHP3-207ENST00000476742 LRRC7Q96NW7 1537 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 CRYBG1Q9Y4K1 1723 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 RTTNQ86VV8 2226 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 CROCC2H7BZ55 1655 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 MYOM1P52179 1685 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 ZNF142P52746 1687 aaPredicted RBP0.72□□□□□ -2.29
NPHP3-207ENST00000476742 COL4A6Q14031 1691 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 PLCH1Q4KWH8 1693 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 FREM1Q5H8C1 2179 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 ARFGEF3Q5TH69 2177 aa0.72□□□□□ -2.29
NPHP3-207ENST00000476742 USP32Q8NFA0 1604 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 TSC2P49815 1807 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 TNRC6BQ9UPQ9 1833 aaKnown RBP0.71□□□□□ -2.3
NPHP3-207ENST00000476742 ARFGEF1Q9Y6D6 1849 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 GLI2P10070 1586 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 CDC42BPGQ6DT37 1551 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 DLEC1Q9Y238 1755 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 DNAJC13O75165 2243 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 A0A1B0GU69 56 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 H0YGX0 51 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 NCR3O14931 201 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 PIN1P1O15428 100 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 MRPL33O75394 65 aaKnown RBP0.71□□□□□ -2.3
NPHP3-207ENST00000476742 HAMPP81172 84 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 TIMM8BQ9Y5J9 83 aaPredicted RBP0.71□□□□□ -2.3
NPHP3-207ENST00000476742 UBR1Q8IWV7 1749 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 IFT172Q9UG01 1749 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 SHPRHQ149N8 1683 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 ALS2Q96Q42 1657 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 RAPGEF6Q8TEU7 1601 aa0.71□□□□□ -2.3
NPHP3-207ENST00000476742 DIP2AQ14689 1571 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 LOC285556D6RIA3 1793 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 EFCAB6Q5THR3 1501 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 ABCA4P78363 2273 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 NHSQ6T4R5 1651 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 RREB1Q92766 1687 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 NBDYA0A0U1RRE5 68 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 SMIM27A0A1W2PRY6 76 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 HCRTO43612 131 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 SPINK13Q1W4C9 94 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 Q6ZRX8 168 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 SMIM11BQ8TCY0 68 aa0.7□□□□□ -2.3
NPHP3-207ENST00000476742 PLAC4Q8WY50 150 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms