RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ANAPC13Q9BS18 74 aa6.33□□□□□ -1.4
HDAC3-208ENST00000476739 LINC00959A0A1B0GUT2 108 aa6.32□□□□□ -1.4
HDAC3-208ENST00000476739 CDK2AP2O75956 126 aa6.32□□□□□ -1.4
HDAC3-208ENST00000476739 XGP55808 180 aa6.32□□□□□ -1.4
HDAC3-208ENST00000476739 HAMPP81172 84 aa6.32□□□□□ -1.4
HDAC3-208ENST00000476739 Q6Q795 121 aa6.32□□□□□ -1.4
HDAC3-208ENST00000476739 Q6ZUT4 128 aa6.32□□□□□ -1.4
HDAC3-208ENST00000476739 OPRPNQ99935 248 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-208ENST00000476739 MAP1LC3AQ9H492 121 aa6.32□□□□□ -1.4
HDAC3-208ENST00000476739 FAM30AQ9NZY2 134 aa6.32□□□□□ -1.4
HDAC3-208ENST00000476739 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
HDAC3-208ENST00000476739 IFI27P40305 119 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-208ENST00000476739 DGAT2L7PQ6IED9 249 aa6.31□□□□□ -1.4
HDAC3-208ENST00000476739 Q8N8P6 123 aa6.31□□□□□ -1.4
HDAC3-208ENST00000476739 AP5S1Q9NUS5 200 aa6.31□□□□□ -1.4
HDAC3-208ENST00000476739 CSDC2Q9Y534 153 aaKnown RBP6.31□□□□□ -1.4
HDAC3-208ENST00000476739 M0QXV9 152 aa6.3□□□□□ -1.4
HDAC3-208ENST00000476739 SLPIP03973 132 aa6.3□□□□□ -1.4
HDAC3-208ENST00000476739 XCL1P47992 114 aa6.3□□□□□ -1.4
HDAC3-208ENST00000476739 FOXI1Q12951 378 aa6.3□□□□□ -1.4
HDAC3-208ENST00000476739 C15orf56Q8N910 161 aa6.3□□□□□ -1.4
HDAC3-208ENST00000476739 TIMM21Q9BVV7 248 aa6.3□□□□□ -1.4
HDAC3-208ENST00000476739 APOMO95445 188 aa6.29□□□□□ -1.4
HDAC3-208ENST00000476739 C14orf177Q52M58 125 aa6.29□□□□□ -1.4
HDAC3-208ENST00000476739 PPDPFLQ8WWR9 84 aa6.29□□□□□ -1.4
HDAC3-208ENST00000476739 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
HDAC3-208ENST00000476739 TRAV13-1A0A0B4J241 112 aa6.28□□□□□ -1.4
HDAC3-208ENST00000476739 HERV-K104P63124 156 aa6.28□□□□□ -1.4
HDAC3-208ENST00000476739 SS18Q15532 418 aa6.28□□□□□ -1.4
HDAC3-208ENST00000476739 HIGD2BQ4VC39 106 aa6.28□□□□□ -1.4
HDAC3-208ENST00000476739 C2orf66Q6UXQ4 117 aa6.28□□□□□ -1.4
HDAC3-208ENST00000476739 IGLV4-3A0A075B6K6 122 aa6.27□□□□□ -1.41
HDAC3-208ENST00000476739 TRBV20-1A0A075B6N2 111 aa6.27□□□□□ -1.41
HDAC3-208ENST00000476739 MRPS36P82909 103 aaKnown RBP6.27□□□□□ -1.41
HDAC3-208ENST00000476739 C5orf47Q569G3 176 aa6.27□□□□□ -1.41
HDAC3-208ENST00000476739 ZC2HC1BQ5TFG8 222 aa6.27□□□□□ -1.41
HDAC3-208ENST00000476739 CD164L2Q6UWJ8 174 aa6.27□□□□□ -1.41
HDAC3-208ENST00000476739 Q6ZSA8 131 aa6.27□□□□□ -1.41
HDAC3-208ENST00000476739 PRSS3P2Q8NHM4 247 aa6.27□□□□□ -1.41
HDAC3-208ENST00000476739 URB1-AS1Q96HZ7 61 aa6.27□□□□□ -1.41
HDAC3-208ENST00000476739 NXT2Q9NPJ8 142 aaKnown RBP6.27□□□□□ -1.41
HDAC3-208ENST00000476739 A0A1B0GWB2 263 aa6.26□□□□□ -1.41
HDAC3-208ENST00000476739 ORMDL2Q53FV1 153 aa6.26□□□□□ -1.41
HDAC3-208ENST00000476739 CEND1Q8N111 149 aa6.26□□□□□ -1.41
HDAC3-208ENST00000476739 C9orf163Q8N9P6 203 aa6.26□□□□□ -1.41
HDAC3-208ENST00000476739 RAB37Q96AX2 223 aa6.26□□□□□ -1.41
HDAC3-208ENST00000476739 LINC00526Q96FQ7 95 aa6.26□□□□□ -1.41
HDAC3-208ENST00000476739 SS18L2Q9UHA2 77 aa6.26□□□□□ -1.41
HDAC3-208ENST00000476739 PYGO1Q9Y3Y4 419 aa6.26□□□□□ -1.41
HDAC3-208ENST00000476739 LINC01546A6NGU7 62 aa6.25□□□□□ -1.41
HDAC3-208ENST00000476739 IGIPA6NJ69 53 aa6.25□□□□□ -1.41
HDAC3-208ENST00000476739 K7EMI3 77 aa6.25□□□□□ -1.41
HDAC3-208ENST00000476739 ATP5LO75964 103 aa6.25□□□□□ -1.41
HDAC3-208ENST00000476739 SMR3BP02814 79 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-208ENST00000476739 CNBPP62633 177 aaKnown RBP6.25□□□□□ -1.41
HDAC3-208ENST00000476739 GAGE2BQ13066 116 aa6.25□□□□□ -1.41
HDAC3-208ENST00000476739 ETDBQ3ZM63 59 aa6.25□□□□□ -1.41
HDAC3-208ENST00000476739 GAGE2EQ4V326 116 aa6.25□□□□□ -1.41
HDAC3-208ENST00000476739 GAGE2DQ9UEU5 116 aa6.25□□□□□ -1.41
HDAC3-208ENST00000476739 ABCA13Q86UQ4 5058 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 GVQW2A0A096LPI5 108 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-208ENST00000476739 PANO1I0J062 215 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 HBDP02042 147 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 IFITM1P13164 125 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 LINC00173Q6ZV60 143 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 C5orf38Q86SI9 138 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 Q8N1X5 172 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 TOMM6Q96B49 74 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 TMEM141Q96I45 108 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 CHAC1Q9BUX1 264 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 PRO0461Q9UI25 63 aa6.24□□□□□ -1.41
HDAC3-208ENST00000476739 IGHV1-58A0A0C4DH39 117 aa6.23□□□□□ -1.41
HDAC3-208ENST00000476739 COX6A2Q02221 97 aa6.23□□□□□ -1.41
HDAC3-208ENST00000476739 SDIM1Q6ZPB5 146 aa6.23□□□□□ -1.41
HDAC3-208ENST00000476739 SCXQ7RTU7 201 aa6.23□□□□□ -1.41
HDAC3-208ENST00000476739 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
HDAC3-208ENST00000476739 IFI27L1Q96BM0 104 aa6.23□□□□□ -1.41
HDAC3-208ENST00000476739 AMELXQ99217 191 aa6.23□□□□□ -1.41
HDAC3-208ENST00000476739 CDIP1Q9H305 208 aa6.23□□□□□ -1.41
HDAC3-208ENST00000476739 A0A096LNJ9 63 aa6.22□□□□□ -1.41
HDAC3-208ENST00000476739 IGHV3OR16-9A0A0B4J2B5 98 aa6.22□□□□□ -1.41
HDAC3-208ENST00000476739 B5MCH6 92 aa6.22□□□□□ -1.41
HDAC3-208ENST00000476739 COX7A2LO14548 114 aa6.22□□□□□ -1.41
HDAC3-208ENST00000476739 SNCGO76070 127 aa6.22□□□□□ -1.41
HDAC3-208ENST00000476739 UBE2D1P51668 147 aa6.22□□□□□ -1.41
HDAC3-208ENST00000476739 LINC00242Q5T6M2 205 aa6.22□□□□□ -1.41
HDAC3-208ENST00000476739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-208ENST00000476739 PCLOQ9Y6V0 5065 aa6.22□□□□□ -1.41
HDAC3-208ENST00000476739 FAT1Q14517 4588 aa6.21□□□□□ -1.41
HDAC3-208ENST00000476739 MALP21145 153 aa6.21□□□□□ -1.42
HDAC3-208ENST00000476739 NMUP48645 174 aa6.21□□□□□ -1.42
HDAC3-208ENST00000476739 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.42
HDAC3-208ENST00000476739 SMIM20Q8N5G0 67 aa6.21□□□□□ -1.42
HDAC3-208ENST00000476739 CIRBP-AS1Q8TBR5 109 aa6.21□□□□□ -1.42
HDAC3-208ENST00000476739 TIMM17AQ99595 171 aa6.21□□□□□ -1.42
HDAC3-208ENST00000476739 IGLV4-69A0A075B6H9 119 aa6.2□□□□□ -1.42
HDAC3-208ENST00000476739 IGHV3-64A0A075B6Q5 118 aa6.2□□□□□ -1.42
HDAC3-208ENST00000476739 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.2□□□□□ -1.42
HDAC3-208ENST00000476739 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
HDAC3-208ENST00000476739 SCGB1C2P0DMR2 95 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms