RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 LINC00469Q8N7U9 141 aa10.78□□□□□ -0.68
SCAF11-206ENST00000474828 PACRGQ96M98 296 aaPredicted RBP10.78□□□□□ -0.68
SCAF11-206ENST00000474828 IGLV5-39A0A0G2JS06 123 aa10.77□□□□□ -0.69
SCAF11-206ENST00000474828 NDUFA1O15239 70 aa10.77□□□□□ -0.69
SCAF11-206ENST00000474828 C10orf25Q5T742 122 aa10.77□□□□□ -0.69
SCAF11-206ENST00000474828 LEPROTL1O95214 131 aa10.76□□□□□ -0.69
SCAF11-206ENST00000474828 ZNF22P17026 224 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-206ENST00000474828 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
SCAF11-206ENST00000474828 A0A096LNI7 61 aa10.75□□□□□ -0.69
SCAF11-206ENST00000474828 TRBV30A0A0K0K1B3 111 aa10.75□□□□□ -0.69
SCAF11-206ENST00000474828 C11orf86A6NJI1 115 aa10.75□□□□□ -0.69
SCAF11-206ENST00000474828 HAMPP81172 84 aa10.75□□□□□ -0.69
SCAF11-206ENST00000474828 UNQ6190/PRO20217Q6UXQ8 127 aa10.75□□□□□ -0.69
SCAF11-206ENST00000474828 PLAC8Q9NZF1 115 aa10.75□□□□□ -0.69
SCAF11-206ENST00000474828 LINC00474Q9P2X8 69 aa10.75□□□□□ -0.69
SCAF11-206ENST00000474828 LOC107984640A0A0U1RRK4 108 aa10.74□□□□□ -0.69
SCAF11-206ENST00000474828 F8VRH5 84 aa10.74□□□□□ -0.69
SCAF11-206ENST00000474828 H3BRM9 83 aa10.74□□□□□ -0.69
SCAF11-206ENST00000474828 CHTF8P0CG12 524 aa10.74□□□□□ -0.69
SCAF11-206ENST00000474828 NDUFA6P56556 154 aa10.74□□□□□ -0.69
SCAF11-206ENST00000474828 HSPB8Q9UJY1 196 aa10.74□□□□□ -0.69
SCAF11-206ENST00000474828 CHTOPQ9Y3Y2 248 aaKnown RBP10.74□□□□□ -0.69
SCAF11-206ENST00000474828 PTTG1IPP53801 180 aa10.73□□□□□ -0.69
SCAF11-206ENST00000474828 ODF1Q14990 250 aa10.73□□□□□ -0.69
SCAF11-206ENST00000474828 C2orf82Q6UX34 121 aa10.73□□□□□ -0.69
SCAF11-206ENST00000474828 CXCL5P42830 114 aa10.72□□□□□ -0.69
SCAF11-206ENST00000474828 C6orf226Q5I0X4 101 aa10.72□□□□□ -0.69
SCAF11-206ENST00000474828 A0A087WYN8 130 aa10.71□□□□□ -0.69
SCAF11-206ENST00000474828 PRSS2P07478 247 aa10.71□□□□□ -0.69
SCAF11-206ENST00000474828 COX7B2Q8TF08 81 aa10.71□□□□□ -0.69
SCAF11-206ENST00000474828 SRRM2Q9UQ35 2752 aaKnown RBP10.71□□□□□ -0.7
SCAF11-206ENST00000474828 SPINK8P0C7L1 97 aa10.7□□□□□ -0.7
SCAF11-206ENST00000474828 SMR3BP02814 79 aaPredicted RBP10.69□□□□□ -0.7
SCAF11-206ENST00000474828 KRTAP10-4P60372 401 aaPredicted RBP10.69□□□□□ -0.7
SCAF11-206ENST00000474828 CKS1BP61024 79 aa10.69□□□□□ -0.7
SCAF11-206ENST00000474828 TOMM7Q9P0U1 55 aa10.69□□□□□ -0.7
SCAF11-206ENST00000474828 TMEM223A0PJW6 202 aa10.68□□□□□ -0.7
SCAF11-206ENST00000474828 NDUFC2-KCTD14E9PQ53 114 aa10.68□□□□□ -0.7
SCAF11-206ENST00000474828 Q5VSD8 79 aa10.68□□□□□ -0.7
SCAF11-206ENST00000474828 Q6ZRP5 223 aa10.68□□□□□ -0.7
SCAF11-206ENST00000474828 IGKV2-24A0A0C4DH68 120 aa10.67□□□□□ -0.7
SCAF11-206ENST00000474828 FABP4P15090 132 aa10.67□□□□□ -0.7
SCAF11-206ENST00000474828 MAJINQ3KP22 176 aa10.67□□□□□ -0.7
SCAF11-206ENST00000474828 LINC00528Q8N1L1 170 aa10.67□□□□□ -0.7
SCAF11-206ENST00000474828 FAM229AH3BQW9 127 aa10.66□□□□□ -0.7
SCAF11-206ENST00000474828 TMEM170BQ5T4T1 132 aa10.66□□□□□ -0.7
SCAF11-206ENST00000474828 MAP1LC3CQ9BXW4 147 aa10.66□□□□□ -0.7
SCAF11-206ENST00000474828 PLNP26678 52 aa10.65□□□□□ -0.7
SCAF11-206ENST00000474828 C9orf116Q5BN46 136 aaPredicted RBP10.65□□□□□ -0.7
SCAF11-206ENST00000474828 STPG4Q8N801 248 aa10.65□□□□□ -0.7
SCAF11-206ENST00000474828 SYS1-DBNDD2H3BUS1 97 aa10.64□□□□□ -0.71
SCAF11-206ENST00000474828 GAGE2BQ13066 116 aa10.64□□□□□ -0.71
SCAF11-206ENST00000474828 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
SCAF11-206ENST00000474828 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
SCAF11-206ENST00000474828 A0A1W2PNN7 141 aa10.63□□□□□ -0.71
SCAF11-206ENST00000474828 RPL18AQ02543 176 aaKnown RBP10.63□□□□□ -0.71
SCAF11-206ENST00000474828 DPM2O94777 84 aa10.62□□□□□ -0.71
SCAF11-206ENST00000474828 DPH3Q96FX2 82 aa10.62□□□□□ -0.71
SCAF11-206ENST00000474828 PLA2G1BP04054 148 aaKnown RBP10.61□□□□□ -0.71
SCAF11-206ENST00000474828 LCE2AQ5TA79 106 aaPredicted RBP10.61□□□□□ -0.71
SCAF11-206ENST00000474828 LINC01545Q5VT33 79 aa10.61□□□□□ -0.71
SCAF11-206ENST00000474828 PET117Q6UWS5 81 aa10.61□□□□□ -0.71
SCAF11-206ENST00000474828 KRTAP7-1Q8IUC3 87 aa10.61□□□□□ -0.71
SCAF11-206ENST00000474828 C9orf129Q5T035 196 aaKnown RBP10.6□□□□□ -0.71
SCAF11-206ENST00000474828 H0Y8G0 127 aa10.59□□□□□ -0.71
SCAF11-206ENST00000474828 IGKCP01834 107 aa10.59□□□□□ -0.71
SCAF11-206ENST00000474828 C3orf79P0CE67 100 aa10.58□□□□□ -0.72
SCAF11-206ENST00000474828 COX17Q14061 63 aa10.58□□□□□ -0.72
SCAF11-206ENST00000474828 GAGE2EQ4V326 116 aa10.57□□□□□ -0.72
SCAF11-206ENST00000474828 GAGE2DQ9UEU5 116 aa10.57□□□□□ -0.72
SCAF11-206ENST00000474828 PKHD1L1Q86WI1 4243 aa10.57□□□□□ -0.72
SCAF11-206ENST00000474828 HIST3H2BBQ8N257 126 aa10.56□□□□□ -0.72
SCAF11-206ENST00000474828 PMCHL2Q9BQD1 86 aa10.56□□□□□ -0.72
SCAF11-206ENST00000474828 PLA2G2DQ9UNK4 145 aa10.56□□□□□ -0.72
SCAF11-206ENST00000474828 FAM168BA1KXE4 195 aa10.55□□□□□ -0.72
SCAF11-206ENST00000474828 LEPROTO15243 131 aa10.55□□□□□ -0.72
SCAF11-206ENST00000474828 RPL37AP61513 92 aaKnown RBP10.55□□□□□ -0.72
SCAF11-206ENST00000474828 C7orf33Q8WU49 177 aa10.55□□□□□ -0.72
SCAF11-206ENST00000474828 ERG28Q9UKR5 140 aa10.55□□□□□ -0.72
SCAF11-206ENST00000474828 MYCBP2O75592 4640 aa10.53□□□□□ -0.72
SCAF11-206ENST00000474828 TSPEAR-AS2P59090 65 aa10.53□□□□□ -0.72
SCAF11-206ENST00000474828 HERV-K104P63124 156 aa10.53□□□□□ -0.72
SCAF11-206ENST00000474828 PLEKHB2Q96CS7 222 aa10.53□□□□□ -0.72
SCAF11-206ENST00000474828 HIST1H2BLQ99880 126 aa10.53□□□□□ -0.72
SCAF11-206ENST00000474828 E9PLD3 99 aa10.52□□□□□ -0.73
SCAF11-206ENST00000474828 INAFM2P0DMQ5 153 aa10.52□□□□□ -0.73
SCAF11-206ENST00000474828 XAGE1AQ9HD64 81 aa10.52□□□□□ -0.73
SCAF11-206ENST00000474828 IGLV5-37A0A075B6J1 123 aa10.51□□□□□ -0.73
SCAF11-206ENST00000474828 J3QQQ9 107 aa10.51□□□□□ -0.73
SCAF11-206ENST00000474828 NMUP48645 174 aa10.51□□□□□ -0.73
SCAF11-206ENST00000474828 HERVK_113P61574 105 aa10.51□□□□□ -0.73
SCAF11-206ENST00000474828 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
SCAF11-206ENST00000474828 TP73-AS1Q9UF72 201 aa10.51□□□□□ -0.73
SCAF11-206ENST00000474828 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
SCAF11-206ENST00000474828 C5orf52A6NGY3 159 aa10.5□□□□□ -0.73
SCAF11-206ENST00000474828 PRR3P79522 188 aaKnown RBP10.5□□□□□ -0.73
SCAF11-206ENST00000474828 SERTAD4-AS1Q5TG53 156 aa10.5□□□□□ -0.73
SCAF11-206ENST00000474828 MYMXA0A1B0GTQ4 84 aa10.49□□□□□ -0.73
SCAF11-206ENST00000474828 KRTDAPP60985 99 aa10.49□□□□□ -0.73
SCAF11-206ENST00000474828 PHF5AQ7RTV0 110 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 229.5 ms