RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 C1orf43Q9BWL3 253 aa12.96□□□□□ -0.33
APP-215ENST00000474136 IGLV4-69A0A075B6H9 119 aa12.95□□□□□ -0.34
APP-215ENST00000474136 CHCHD10Q8WYQ3 142 aaPredicted RBP12.95□□□□□ -0.34
APP-215ENST00000474136 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.95□□□□□ -0.34
APP-215ENST00000474136 H3BRM9 83 aa12.94□□□□□ -0.34
APP-215ENST00000474136 IGLV5-45A0A087WSX0 123 aa12.93□□□□□ -0.34
APP-215ENST00000474136 PANO1I0J062 215 aa12.93□□□□□ -0.34
APP-215ENST00000474136 C14orf177Q52M58 125 aa12.93□□□□□ -0.34
APP-215ENST00000474136 Q6ZRU5 148 aa12.93□□□□□ -0.34
APP-215ENST00000474136 C11orf86A6NJI1 115 aa12.92□□□□□ -0.34
APP-215ENST00000474136 XCL1P47992 114 aa12.92□□□□□ -0.34
APP-215ENST00000474136 LINC01561Q8N1V8 128 aa12.92□□□□□ -0.34
APP-215ENST00000474136 LINC00469Q8N7U9 141 aa12.92□□□□□ -0.34
APP-215ENST00000474136 PMCHL2Q9BQD1 86 aa12.92□□□□□ -0.34
APP-215ENST00000474136 IGLV10-54A0A075B6I4 117 aa12.91□□□□□ -0.34
APP-215ENST00000474136 IGHV3OR16-9A0A0B4J2B5 98 aa12.91□□□□□ -0.34
APP-215ENST00000474136 TMEM170BQ5T4T1 132 aa12.91□□□□□ -0.34
APP-215ENST00000474136 HSBP1L1C9JCN9 74 aa12.9□□□□□ -0.34
APP-215ENST00000474136 USP17L23D6RBM5 183 aa12.9□□□□□ -0.34
APP-215ENST00000474136 HERVK_113P61574 105 aa12.9□□□□□ -0.34
APP-215ENST00000474136 A0A087WZ39 114 aa12.89□□□□□ -0.35
APP-215ENST00000474136 COX7A2LO14548 114 aa12.89□□□□□ -0.35
APP-215ENST00000474136 COX6A2Q02221 97 aa12.89□□□□□ -0.35
APP-215ENST00000474136 PYY3Q5JQD4 70 aa12.89□□□□□ -0.35
APP-215ENST00000474136 GAGE12HA6NDE8 117 aa12.88□□□□□ -0.35
APP-215ENST00000474136 SMIM6P0DI80 62 aa12.88□□□□□ -0.35
APP-215ENST00000474136 ZNF22P17026 224 aaPredicted RBP12.88□□□□□ -0.35
APP-215ENST00000474136 CDKN2A-AS1Q9UH64 79 aa12.88□□□□□ -0.35
APP-215ENST00000474136 APOMO95445 188 aa12.88□□□□□ -0.35
APP-215ENST00000474136 FOXI1Q12951 378 aa12.88□□□□□ -0.35
APP-215ENST00000474136 MALP21145 153 aa12.87□□□□□ -0.35
APP-215ENST00000474136 C9orf163Q8N9P6 203 aa12.87□□□□□ -0.35
APP-215ENST00000474136 CFAP161Q6P656 301 aa12.86□□□□□ -0.35
APP-215ENST00000474136 KRTAP26-1Q6PEX3 210 aa12.86□□□□□ -0.35
APP-215ENST00000474136 TMEM223A0PJW6 202 aa12.85□□□□□ -0.35
APP-215ENST00000474136 S100A12P80511 92 aa12.85□□□□□ -0.35
APP-215ENST00000474136 SDIM1Q6ZPB5 146 aa12.85□□□□□ -0.35
APP-215ENST00000474136 C5orf38Q86SI9 138 aa12.85□□□□□ -0.35
APP-215ENST00000474136 ATOH7Q8N100 152 aa12.85□□□□□ -0.35
APP-215ENST00000474136 VAMP8Q9BV40 100 aa12.83□□□□□ -0.36
APP-215ENST00000474136 IGHV1-58A0A0C4DH39 117 aa12.82□□□□□ -0.36
APP-215ENST00000474136 E9PLD3 99 aa12.82□□□□□ -0.36
APP-215ENST00000474136 SMIM1B2RUZ4 78 aa12.81□□□□□ -0.36
APP-215ENST00000474136 STPG4Q8N801 248 aa12.81□□□□□ -0.36
APP-215ENST00000474136 PLEKHB2Q96CS7 222 aa12.81□□□□□ -0.36
APP-215ENST00000474136 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
APP-215ENST00000474136 SPINK8P0C7L1 97 aa12.8□□□□□ -0.36
APP-215ENST00000474136 IGLV5-39A0A0G2JS06 123 aa12.79□□□□□ -0.36
APP-215ENST00000474136 hDV102S1A0JD36 115 aa12.79□□□□□ -0.36
APP-215ENST00000474136 LEPROTO15243 131 aa12.79□□□□□ -0.36
APP-215ENST00000474136 PRSS2P07478 247 aa12.78□□□□□ -0.36
APP-215ENST00000474136 CIRBPQ14011 172 aaKnown RBP12.78□□□□□ -0.36
APP-215ENST00000474136 SFTA2Q6UW10 78 aa12.78□□□□□ -0.36
APP-215ENST00000474136 F8WDY8 70 aa12.76□□□□□ -0.37
APP-215ENST00000474136 CHTF8P0CG12 524 aa12.76□□□□□ -0.37
APP-215ENST00000474136 Q8IZM0 81 aa12.76□□□□□ -0.37
APP-215ENST00000474136 ORAOV1Q8WV07 137 aa12.76□□□□□ -0.37
APP-215ENST00000474136 A0A087WYN8 130 aa12.75□□□□□ -0.37
APP-215ENST00000474136 J3QQQ9 107 aa12.75□□□□□ -0.37
APP-215ENST00000474136 LGALS3P17931 250 aaKnown RBP12.75□□□□□ -0.37
APP-215ENST00000474136 SPATA45Q537H7 98 aa12.75□□□□□ -0.37
APP-215ENST00000474136 C6orf226Q5I0X4 101 aa12.75□□□□□ -0.37
APP-215ENST00000474136 COX7B2Q8TF08 81 aa12.75□□□□□ -0.37
APP-215ENST00000474136 DPH3Q96FX2 82 aa12.75□□□□□ -0.37
APP-215ENST00000474136 PAM16Q9Y3D7 125 aa12.75□□□□□ -0.37
APP-215ENST00000474136 ZNF561-AS1K7EIQ3 104 aa12.74□□□□□ -0.37
APP-215ENST00000474136 CXCL5P42830 114 aa12.74□□□□□ -0.37
APP-215ENST00000474136 NMUP48645 174 aa12.74□□□□□ -0.37
APP-215ENST00000474136 MAJINQ3KP22 176 aa12.74□□□□□ -0.37
APP-215ENST00000474136 ANKRD39Q53RE8 183 aa12.74□□□□□ -0.37
APP-215ENST00000474136 LINC01600Q96MT4 127 aa12.74□□□□□ -0.37
APP-215ENST00000474136 GVQW2A0A096LPI5 108 aaPredicted RBP12.73□□□□□ -0.37
APP-215ENST00000474136 C12orf57Q99622 126 aa12.73□□□□□ -0.37
APP-215ENST00000474136 TOMM7Q9P0U1 55 aa12.73□□□□□ -0.37
APP-215ENST00000474136 CKS1BP61024 79 aa12.72□□□□□ -0.37
APP-215ENST00000474136 SPAG11BQ08648 103 aa12.72□□□□□ -0.37
APP-215ENST00000474136 LINC00518Q8N0U6 118 aa12.71□□□□□ -0.37
APP-215ENST00000474136 C15orf56Q8N910 161 aa12.71□□□□□ -0.37
APP-215ENST00000474136 C2orf48Q96LS8 159 aa12.71□□□□□ -0.37
APP-215ENST00000474136 CNBPP62633 177 aaKnown RBP12.7□□□□□ -0.38
APP-215ENST00000474136 SPACA4Q8TDM5 124 aa12.7□□□□□ -0.38
APP-215ENST00000474136 IGKV2D-26A0A0A0MRZ7 120 aa12.69□□□□□ -0.38
APP-215ENST00000474136 MYMXA0A1B0GTQ4 84 aa12.69□□□□□ -0.38
APP-215ENST00000474136 SLPIP03973 132 aa12.69□□□□□ -0.38
APP-215ENST00000474136 HERV-K104P63124 156 aa12.69□□□□□ -0.38
APP-215ENST00000474136 KIAA0087Q14695 138 aa12.69□□□□□ -0.38
APP-215ENST00000474136 NDUFA12Q9UI09 145 aa12.68□□□□□ -0.38
APP-215ENST00000474136 LINC00587B1AMM8 73 aa12.67□□□□□ -0.38
APP-215ENST00000474136 NDUFA1O15239 70 aa12.67□□□□□ -0.38
APP-215ENST00000474136 COX8AP10176 69 aa12.67□□□□□ -0.38
APP-215ENST00000474136 PLAC8Q9NZF1 115 aa12.67□□□□□ -0.38
APP-215ENST00000474136 DLEU1O43261 78 aa12.66□□□□□ -0.38
APP-215ENST00000474136 HIGD2BQ4VC39 106 aa12.66□□□□□ -0.38
APP-215ENST00000474136 ZNF815PA8K554 130 aa12.65□□□□□ -0.38
APP-215ENST00000474136 C7orf33Q8WU49 177 aa12.65□□□□□ -0.38
APP-215ENST00000474136 CAMK2N2Q96S95 79 aa12.65□□□□□ -0.38
APP-215ENST00000474136 TSPEAR-AS2P59090 65 aa12.64□□□□□ -0.39
APP-215ENST00000474136 KRTAP10-8P60410 259 aa12.64□□□□□ -0.39
APP-215ENST00000474136 SLC25A34Q6PIV7 304 aa12.64□□□□□ -0.39
APP-215ENST00000474136 BOD1L2Q8IYS8 172 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms