RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 COPS9Q8WXC6 57 aa6.84□□□□□ -1.31
PRPF38A-202ENST00000474048 TTTY13Q9BZ97 58 aa6.84□□□□□ -1.31
PRPF38A-202ENST00000474048 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.83□□□□□ -1.32
PRPF38A-202ENST00000474048 LECT2O14960 151 aa6.83□□□□□ -1.32
PRPF38A-202ENST00000474048 ZNF625Q96I27 306 aaPredicted RBP6.83□□□□□ -1.32
PRPF38A-202ENST00000474048 C2orf48Q96LS8 159 aa6.83□□□□□ -1.32
PRPF38A-202ENST00000474048 GVQW2A0A096LPI5 108 aaPredicted RBP6.82□□□□□ -1.32
PRPF38A-202ENST00000474048 DDTP30046 118 aa6.82□□□□□ -1.32
PRPF38A-202ENST00000474048 LINC00158P58513 81 aa6.82□□□□□ -1.32
PRPF38A-202ENST00000474048 KRTAP26-1Q6PEX3 210 aa6.82□□□□□ -1.32
PRPF38A-202ENST00000474048 C15orf56Q8N910 161 aa6.82□□□□□ -1.32
PRPF38A-202ENST00000474048 HIST1H4GQ99525 98 aa6.82□□□□□ -1.32
PRPF38A-202ENST00000474048 PKIGQ9Y2B9 76 aa6.82□□□□□ -1.32
PRPF38A-202ENST00000474048 A0A0J9YXY3 114 aa6.81□□□□□ -1.32
PRPF38A-202ENST00000474048 TRBV30A0A0K0K1B3 111 aa6.81□□□□□ -1.32
PRPF38A-202ENST00000474048 TNP2Q05952 138 aa6.81□□□□□ -1.32
PRPF38A-202ENST00000474048 SYCNQ0VAF6 134 aa6.81□□□□□ -1.32
PRPF38A-202ENST00000474048 C2orf82Q6UX34 121 aa6.81□□□□□ -1.32
PRPF38A-202ENST00000474048 Q6ZR54 194 aa6.81□□□□□ -1.32
PRPF38A-202ENST00000474048 MAPKAPK5-AS1Q8N8E1 139 aa6.81□□□□□ -1.32
PRPF38A-202ENST00000474048 CARD19Q96LW7 228 aa6.81□□□□□ -1.32
PRPF38A-202ENST00000474048 HIGD1BQ9P298 99 aa6.81□□□□□ -1.32
PRPF38A-202ENST00000474048 LCE6AA0A183 80 aa6.8□□□□□ -1.32
PRPF38A-202ENST00000474048 M0R143 59 aa6.8□□□□□ -1.32
PRPF38A-202ENST00000474048 TIMM17BO60830 172 aa6.8□□□□□ -1.32
PRPF38A-202ENST00000474048 PFN2P35080 140 aa6.8□□□□□ -1.32
PRPF38A-202ENST00000474048 NTN5Q8WTR8 489 aaPredicted RBP6.8□□□□□ -1.32
PRPF38A-202ENST00000474048 LINC00526Q96FQ7 95 aa6.8□□□□□ -1.32
PRPF38A-202ENST00000474048 ERG28Q9UKR5 140 aa6.8□□□□□ -1.32
PRPF38A-202ENST00000474048 TENM2Q9NT68 2774 aa6.8□□□□□ -1.32
PRPF38A-202ENST00000474048 A0A0U1RRA0 63 aa6.79□□□□□ -1.32
PRPF38A-202ENST00000474048 TMEM238LA0A1B0GVL6 79 aa6.79□□□□□ -1.32
PRPF38A-202ENST00000474048 HSD52Q0P140 79 aa6.79□□□□□ -1.32
PRPF38A-202ENST00000474048 COX17Q14061 63 aa6.79□□□□□ -1.32
PRPF38A-202ENST00000474048 Q6ZVH6 145 aa6.79□□□□□ -1.32
PRPF38A-202ENST00000474048 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.78□□□□□ -1.32
PRPF38A-202ENST00000474048 SMIM13P0DJ93 91 aa6.78□□□□□ -1.32
PRPF38A-202ENST00000474048 PTTG1IPP53801 180 aa6.78□□□□□ -1.32
PRPF38A-202ENST00000474048 KIAA0087Q14695 138 aa6.78□□□□□ -1.32
PRPF38A-202ENST00000474048 TAL2Q16559 108 aa6.78□□□□□ -1.32
PRPF38A-202ENST00000474048 UNQ6190/PRO20217Q6UXQ8 127 aa6.78□□□□□ -1.32
PRPF38A-202ENST00000474048 SPANXB1Q9NS25 103 aaPredicted RBP6.78□□□□□ -1.32
PRPF38A-202ENST00000474048 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
PRPF38A-202ENST00000474048 CTAG1AP78358 180 aa6.77□□□□□ -1.33
PRPF38A-202ENST00000474048 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
PRPF38A-202ENST00000474048 Q6ZRU5 148 aa6.77□□□□□ -1.33
PRPF38A-202ENST00000474048 CSMD3Q7Z407 3707 aa6.77□□□□□ -1.33
PRPF38A-202ENST00000474048 IFITM1P13164 125 aa6.76□□□□□ -1.33
PRPF38A-202ENST00000474048 RPL18AQ02543 176 aaKnown RBP6.76□□□□□ -1.33
PRPF38A-202ENST00000474048 BATFQ16520 125 aa6.76□□□□□ -1.33
PRPF38A-202ENST00000474048 C2orf91Q6ZV80 131 aa6.76□□□□□ -1.33
PRPF38A-202ENST00000474048 SPANXDQ9BXN6 97 aa6.76□□□□□ -1.33
PRPF38A-202ENST00000474048 SPANXCQ9NY87 97 aa6.76□□□□□ -1.33
PRPF38A-202ENST00000474048 DNAH7Q8WXX0 4024 aa6.76□□□□□ -1.33
PRPF38A-202ENST00000474048 STARD9Q9P2P6 4700 aa6.76□□□□□ -1.33
PRPF38A-202ENST00000474048 NPC2P61916 151 aa6.75□□□□□ -1.33
PRPF38A-202ENST00000474048 RNF151Q2KHN1 245 aa6.75□□□□□ -1.33
PRPF38A-202ENST00000474048 Q6ZRN7 208 aaPredicted RBP6.75□□□□□ -1.33
PRPF38A-202ENST00000474048 MIR7-3HGQ8N6C7 128 aa6.75□□□□□ -1.33
PRPF38A-202ENST00000474048 Q8N814 137 aa6.75□□□□□ -1.33
PRPF38A-202ENST00000474048 A0A087WTM6 91 aa6.74□□□□□ -1.33
PRPF38A-202ENST00000474048 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
PRPF38A-202ENST00000474048 A6NDN8 102 aa6.74□□□□□ -1.33
PRPF38A-202ENST00000474048 NDUFC2-KCTD14E9PQ53 114 aa6.74□□□□□ -1.33
PRPF38A-202ENST00000474048 HINT1P49773 126 aaPredicted RBP6.74□□□□□ -1.33
PRPF38A-202ENST00000474048 C9orf116Q5BN46 136 aaPredicted RBP6.74□□□□□ -1.33
PRPF38A-202ENST00000474048 C10orf25Q5T742 122 aa6.74□□□□□ -1.33
PRPF38A-202ENST00000474048 CEND1Q8N111 149 aa6.74□□□□□ -1.33
PRPF38A-202ENST00000474048 DAND5Q8N907 189 aa6.74□□□□□ -1.33
PRPF38A-202ENST00000474048 C6orf48Q9UBA6 75 aa6.74□□□□□ -1.33
PRPF38A-202ENST00000474048 CNBPP62633 177 aaKnown RBP6.73□□□□□ -1.33
PRPF38A-202ENST00000474048 WFDC2Q14508 124 aa6.73□□□□□ -1.33
PRPF38A-202ENST00000474048 DYNC2H1Q8NCM8 4307 aaKnown RBP6.72□□□□□ -1.33
PRPF38A-202ENST00000474048 LRCOL1A6NCL2 159 aa6.72□□□□□ -1.33
PRPF38A-202ENST00000474048 GAGE2EQ4V326 116 aa6.72□□□□□ -1.33
PRPF38A-202ENST00000474048 MUSTN1Q8IVN3 82 aa6.72□□□□□ -1.33
PRPF38A-202ENST00000474048 LINC00308Q8TCZ7 52 aa6.72□□□□□ -1.33
PRPF38A-202ENST00000474048 GAGE2DQ9UEU5 116 aa6.72□□□□□ -1.33
PRPF38A-202ENST00000474048 IGLV5-52A0A0A0MRZ9 124 aa6.71□□□□□ -1.34
PRPF38A-202ENST00000474048 LINC00336Q6ZUF6 198 aa6.71□□□□□ -1.34
PRPF38A-202ENST00000474048 RAB37Q96AX2 223 aa6.71□□□□□ -1.34
PRPF38A-202ENST00000474048 RTL8CO15255 209 aa6.7□□□□□ -1.34
PRPF38A-202ENST00000474048 GAGE2BQ13066 116 aa6.7□□□□□ -1.34
PRPF38A-202ENST00000474048 ADAMTSL4-AS1Q5T5F5 129 aa6.7□□□□□ -1.34
PRPF38A-202ENST00000474048 LITAFQ99732 161 aa6.7□□□□□ -1.34
PRPF38A-202ENST00000474048 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
PRPF38A-202ENST00000474048 NHP2Q9NX24 153 aaKnown RBP6.7□□□□□ -1.34
PRPF38A-202ENST00000474048 PLECQ15149 4684 aaKnown RBP6.7□□□□□ -1.34
PRPF38A-202ENST00000474048 TLX1NBP0CAT3 122 aa6.69□□□□□ -1.34
PRPF38A-202ENST00000474048 BVES-AS1Q5T3Y7 98 aa6.69□□□□□ -1.34
PRPF38A-202ENST00000474048 LINC00474Q9P2X8 69 aa6.69□□□□□ -1.34
PRPF38A-202ENST00000474048 A4D1N5 150 aa6.68□□□□□ -1.34
PRPF38A-202ENST00000474048 GHRHP01286 108 aa6.68□□□□□ -1.34
PRPF38A-202ENST00000474048 Q1RN00 199 aa6.68□□□□□ -1.34
PRPF38A-202ENST00000474048 C9orf163Q8N9P6 203 aa6.68□□□□□ -1.34
PRPF38A-202ENST00000474048 NKAPP1Q8N9T2 125 aa6.68□□□□□ -1.34
PRPF38A-202ENST00000474048 DPH3Q96FX2 82 aa6.68□□□□□ -1.34
PRPF38A-202ENST00000474048 PPDPFQ9H3Y8 114 aa6.68□□□□□ -1.34
PRPF38A-202ENST00000474048 XAGE1AQ9HD64 81 aa6.68□□□□□ -1.34
PRPF38A-202ENST00000474048 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms