RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 LINC00612Q8N6U2 182 aa4.13□□□□□ -1.75
ATPAF1-204ENST00000474020 LITAFQ99732 161 aa4.13□□□□□ -1.75
ATPAF1-204ENST00000474020 SMR3AQ99954 134 aa4.13□□□□□ -1.75
ATPAF1-204ENST00000474020 Q9UF83 564 aa4.13□□□□□ -1.75
ATPAF1-204ENST00000474020 PRO0461Q9UI25 63 aa4.13□□□□□ -1.75
ATPAF1-204ENST00000474020 TRAV13-2A0A0B4J235 113 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 IGKV3OR2-268A0A0C4DH90 116 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 H3BT86 120 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 CRPP02741 224 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 ATP5G1P05496 136 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 MIFP14174 115 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 NPC2P61916 151 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 LINC01620Q4KN68 170 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 FAM222AQ5U5X8 452 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 LINC01561Q8N1V8 128 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 LINC00308Q8TCZ7 52 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 TOMM7Q9P0U1 55 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 HIVEP2P31629 2446 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 MAP1AP78559 2803 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 JMJD1CQ15652 2540 aa4.12□□□□□ -1.75
ATPAF1-204ENST00000474020 SORL1Q92673 2214 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 TRAV26-1A0A087WT03 109 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 TRBV10-2A0A0K0K1G8 114 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 LOC100131303A0A0U1RQF7 123 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 A0A1B0GUV1 79 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 A8MZ25 164 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 IBA57-AS1B1ANH7 110 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 SPART-AS1P0CW21 52 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 CXCL5P42830 114 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 LINC00158P58513 81 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 COX6A2Q02221 97 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 ADAMTSL4-AS1Q5T5F5 129 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 CFAP161Q6P656 301 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 C2orf82Q6UX34 121 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 MTURNQ8N3F0 131 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 ANKRD29Q8N6D5 301 aa4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 ZNF625Q96I27 306 aaPredicted RBP4.11□□□□□ -1.75
ATPAF1-204ENST00000474020 SONP18583 2426 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-204ENST00000474020 A0A087WZ39 114 aa4.1□□□□□ -1.75
ATPAF1-204ENST00000474020 F5H768 121 aa4.1□□□□□ -1.75
ATPAF1-204ENST00000474020 SNCGO76070 127 aa4.1□□□□□ -1.75
ATPAF1-204ENST00000474020 KRTAP10-3P60369 221 aa4.1□□□□□ -1.75
ATPAF1-204ENST00000474020 MRPL23Q16540 153 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-204ENST00000474020 DEFB135Q30KP9 77 aa4.1□□□□□ -1.75
ATPAF1-204ENST00000474020 C6orf226Q5I0X4 101 aa4.1□□□□□ -1.75
ATPAF1-204ENST00000474020 UBE2WQ96B02 151 aa4.1□□□□□ -1.75
ATPAF1-204ENST00000474020 CITED1Q99966 193 aa4.1□□□□□ -1.75
ATPAF1-204ENST00000474020 NACAE9PAV3 2078 aa4.09□□□□□ -1.75
ATPAF1-204ENST00000474020 TRAV8-4A0A0B4J246 113 aa4.09□□□□□ -1.75
ATPAF1-204ENST00000474020 IGHV4-28A0A0C4DH34 117 aa4.09□□□□□ -1.75
ATPAF1-204ENST00000474020 A0A0U1RRA0 63 aa4.09□□□□□ -1.75
ATPAF1-204ENST00000474020 LINC00959A0A1B0GUT2 108 aa4.09□□□□□ -1.75
ATPAF1-204ENST00000474020 CKS1BP61024 79 aa4.09□□□□□ -1.75
ATPAF1-204ENST00000474020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.09□□□□□ -1.75
ATPAF1-204ENST00000474020 DAND5Q8N907 189 aa4.09□□□□□ -1.75
ATPAF1-204ENST00000474020 CARD19Q96LW7 228 aa4.09□□□□□ -1.75
ATPAF1-204ENST00000474020 FLNAP21333 2647 aaKnown RBP4.09□□□□□ -1.75
ATPAF1-204ENST00000474020 TLN2Q9Y4G6 2542 aa4.09□□□□□ -1.76
ATPAF1-204ENST00000474020 IGLV4-60A0A075B6I1 120 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 IGHV3OR16-9A0A0B4J2B5 98 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 COL6A5A8TX70 2615 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 LST1O00453 97 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 COX7A2LO14548 114 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 DNAL4O96015 105 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 TRACP01848 142 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 XCL1P47992 114 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 C5orf38Q86SI9 138 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 Q8IZM0 81 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 MIR7-3HGQ8N6C7 128 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 LINC01600Q96MT4 127 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 SND1-IT1Q9HBX3 110 aa4.08□□□□□ -1.76
ATPAF1-204ENST00000474020 H0YGX0 51 aa4.07□□□□□ -1.76
ATPAF1-204ENST00000474020 ANGP03950 147 aaKnown RBP4.07□□□□□ -1.76
ATPAF1-204ENST00000474020 HTN3P15516 51 aa4.07□□□□□ -1.76
ATPAF1-204ENST00000474020 LELP1Q5T871 98 aa4.07□□□□□ -1.76
ATPAF1-204ENST00000474020 CD164L2Q6UWJ8 174 aa4.07□□□□□ -1.76
ATPAF1-204ENST00000474020 WFDC9Q8NEX5 89 aa4.07□□□□□ -1.76
ATPAF1-204ENST00000474020 MUC7Q8TAX7 377 aa4.07□□□□□ -1.76
ATPAF1-204ENST00000474020 WNK1Q9H4A3 2382 aa4.07□□□□□ -1.76
ATPAF1-204ENST00000474020 A0A096LPF7 62 aa4.06□□□□□ -1.76
ATPAF1-204ENST00000474020 A0A1B0GV72 72 aa4.06□□□□□ -1.76
ATPAF1-204ENST00000474020 INAFM2P0DMQ5 153 aa4.06□□□□□ -1.76
ATPAF1-204ENST00000474020 IGHV4-30-4P0DP06 118 aa4.06□□□□□ -1.76
ATPAF1-204ENST00000474020 PFN2P35080 140 aa4.06□□□□□ -1.76
ATPAF1-204ENST00000474020 COX17Q14061 63 aa4.06□□□□□ -1.76
ATPAF1-204ENST00000474020 OR13C6PQ8NH95 151 aa4.06□□□□□ -1.76
ATPAF1-204ENST00000474020 SPATA3Q8NHX4 192 aa4.06□□□□□ -1.76
ATPAF1-204ENST00000474020 CLEC2BQ92478 149 aa4.06□□□□□ -1.76
ATPAF1-204ENST00000474020 NOTCH1P46531 2555 aa4.06□□□□□ -1.76
ATPAF1-204ENST00000474020 IGKV2D-30A0A075B6S6 120 aa4.05□□□□□ -1.76
ATPAF1-204ENST00000474020 DEFB4AO15263 64 aa4.05□□□□□ -1.76
ATPAF1-204ENST00000474020 ACYP1P07311 99 aa4.05□□□□□ -1.76
ATPAF1-204ENST00000474020 RPL28P46779 137 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-204ENST00000474020 REG3AQ06141 175 aa4.05□□□□□ -1.76
ATPAF1-204ENST00000474020 LINC00269Q8N2A0 174 aa4.05□□□□□ -1.76
ATPAF1-204ENST00000474020 C3orf56Q8N813 242 aa4.05□□□□□ -1.76
ATPAF1-204ENST00000474020 Q8NAQ8 132 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms