RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 TRBV6-4A0A1B0GX49 114 aa7.67□□□□□ -1.18
C9orf3-214ENST00000473778 IGKV2D-28P01615 120 aa7.67□□□□□ -1.18
C9orf3-214ENST00000473778 FHL2Q14192 279 aa7.67□□□□□ -1.18
C9orf3-214ENST00000473778 MAST4O15021 2626 aa7.66□□□□□ -1.18
C9orf3-214ENST00000473778 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
C9orf3-214ENST00000473778 LINC00337Q8N6G1 96 aa7.66□□□□□ -1.18
C9orf3-214ENST00000473778 SMCR5Q8TEV8 140 aa7.66□□□□□ -1.18
C9orf3-214ENST00000473778 OVOL2Q9BRP0 275 aa7.66□□□□□ -1.18
C9orf3-214ENST00000473778 IGHV3OR16-9A0A0B4J2B5 98 aa7.66□□□□□ -1.18
C9orf3-214ENST00000473778 MIR7-3HGQ8N6C7 128 aa7.66□□□□□ -1.18
C9orf3-214ENST00000473778 TRGV4A0A0C4DH28 118 aa7.65□□□□□ -1.18
C9orf3-214ENST00000473778 TRACP01848 142 aa7.65□□□□□ -1.18
C9orf3-214ENST00000473778 C2orf48Q96LS8 159 aa7.65□□□□□ -1.18
C9orf3-214ENST00000473778 TOMM7Q9P0U1 55 aa7.65□□□□□ -1.18
C9orf3-214ENST00000473778 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
C9orf3-214ENST00000473778 hADV29S1A0JD25 119 aa7.64□□□□□ -1.19
C9orf3-214ENST00000473778 CXCL5P42830 114 aa7.64□□□□□ -1.19
C9orf3-214ENST00000473778 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
C9orf3-214ENST00000473778 RNASE1P07998 156 aaKnown RBP7.63□□□□□ -1.19
C9orf3-214ENST00000473778 C5orf38Q86SI9 138 aa7.63□□□□□ -1.19
C9orf3-214ENST00000473778 DPH3Q96FX2 82 aa7.63□□□□□ -1.19
C9orf3-214ENST00000473778 ATOX1O00244 68 aa7.63□□□□□ -1.19
C9orf3-214ENST00000473778 C16orf95Q9H693 158 aa7.63□□□□□ -1.19
C9orf3-214ENST00000473778 Q9HAA7 133 aa7.63□□□□□ -1.19
C9orf3-214ENST00000473778 KRTAP10-3P60369 221 aa7.62□□□□□ -1.19
C9orf3-214ENST00000473778 TMEM258P61165 79 aa7.62□□□□□ -1.19
C9orf3-214ENST00000473778 KIR2DL5BQ8NHK3 375 aa7.62□□□□□ -1.19
C9orf3-214ENST00000473778 UNC79Q9P2D8 2635 aa7.62□□□□□ -1.19
C9orf3-214ENST00000473778 DEFB130BP0DP73 79 aa7.62□□□□□ -1.19
C9orf3-214ENST00000473778 DEFB130AP0DP74 79 aa7.62□□□□□ -1.19
C9orf3-214ENST00000473778 C4orf26Q17RF5 130 aa7.62□□□□□ -1.19
C9orf3-214ENST00000473778 SPATA3Q8NHX4 192 aa7.62□□□□□ -1.19
C9orf3-214ENST00000473778 TENM1Q9UKZ4 2725 aa7.61□□□□□ -1.19
C9orf3-214ENST00000473778 C9orf129Q5T035 196 aaKnown RBP7.61□□□□□ -1.19
C9orf3-214ENST00000473778 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
C9orf3-214ENST00000473778 CCL18P55774 89 aa7.61□□□□□ -1.19
C9orf3-214ENST00000473778 HRCT1Q6UXD1 115 aa7.61□□□□□ -1.19
C9orf3-214ENST00000473778 MRAPQ8TCY5 172 aa7.61□□□□□ -1.19
C9orf3-214ENST00000473778 OTOGQ6ZRI0 2925 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 A0A087WZ39 114 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 BAALC-AS2P0C853 105 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 RPL28P46779 137 aaKnown RBP7.6□□□□□ -1.19
C9orf3-214ENST00000473778 COPS9Q8WXC6 57 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 CYSTM1Q9H1C7 97 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 C11orf68Q9H3H3 251 aaKnown RBP7.6□□□□□ -1.19
C9orf3-214ENST00000473778 A0A087WYN8 130 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 PFN2P35080 140 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 LINC00158P58513 81 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 HIST1H4AP62805 103 aaKnown RBP7.6□□□□□ -1.19
C9orf3-214ENST00000473778 SDIM1Q6ZPB5 146 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 SMIM11BQ8TCY0 68 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 SMR3AQ99954 134 aa7.6□□□□□ -1.19
C9orf3-214ENST00000473778 LINC00959A0A1B0GUT2 108 aa7.59□□□□□ -1.19
C9orf3-214ENST00000473778 OXTP01178 125 aa7.59□□□□□ -1.19
C9orf3-214ENST00000473778 CLPSL2Q6UWE3 100 aa7.59□□□□□ -1.19
C9orf3-214ENST00000473778 HIVEP2P31629 2446 aa7.59□□□□□ -1.19
C9orf3-214ENST00000473778 TRRAPQ9Y4A5 3859 aa7.59□□□□□ -1.19
C9orf3-214ENST00000473778 A0A096LPF7 62 aa7.59□□□□□ -1.2
C9orf3-214ENST00000473778 CRPP02741 224 aa7.59□□□□□ -1.2
C9orf3-214ENST00000473778 CMC4P56277 68 aaPredicted RBP7.59□□□□□ -1.2
C9orf3-214ENST00000473778 DSCR8Q96T75 97 aa7.59□□□□□ -1.2
C9orf3-214ENST00000473778 TRAV13-2A0A0B4J235 113 aa7.58□□□□□ -1.2
C9orf3-214ENST00000473778 OXLD1Q5BKU9 147 aa7.58□□□□□ -1.2
C9orf3-214ENST00000473778 Q5XG85 94 aa7.58□□□□□ -1.2
C9orf3-214ENST00000473778 GYPEP15421 78 aa7.57□□□□□ -1.2
C9orf3-214ENST00000473778 XCL1P47992 114 aa7.57□□□□□ -1.2
C9orf3-214ENST00000473778 FAM222AQ5U5X8 452 aa7.57□□□□□ -1.2
C9orf3-214ENST00000473778 Q8N3U1 123 aa7.57□□□□□ -1.2
C9orf3-214ENST00000473778 LINC00612Q8N6U2 182 aa7.57□□□□□ -1.2
C9orf3-214ENST00000473778 X6R8D5 127 aa7.57□□□□□ -1.2
C9orf3-214ENST00000473778 PF4P02776 101 aa7.56□□□□□ -1.2
C9orf3-214ENST00000473778 HILS1P60008 231 aa7.56□□□□□ -1.2
C9orf3-214ENST00000473778 RPL18AQ02543 176 aaKnown RBP7.56□□□□□ -1.2
C9orf3-214ENST00000473778 IBA57-AS1B1ANH7 110 aa7.56□□□□□ -1.2
C9orf3-214ENST00000473778 DEFB4AO15263 64 aa7.55□□□□□ -1.2
C9orf3-214ENST00000473778 MALP21145 153 aa7.55□□□□□ -1.2
C9orf3-214ENST00000473778 SERP2Q8N6R1 65 aa7.55□□□□□ -1.2
C9orf3-214ENST00000473778 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
C9orf3-214ENST00000473778 UPK3BQ9BT76 320 aa7.54□□□□□ -1.2
C9orf3-214ENST00000473778 PRR3P79522 188 aaKnown RBP7.54□□□□□ -1.2
C9orf3-214ENST00000473778 PAX4O43316 350 aa7.53□□□□□ -1.2
C9orf3-214ENST00000473778 C6orf226Q5I0X4 101 aa7.53□□□□□ -1.2
C9orf3-214ENST00000473778 SLPIP03973 132 aa7.53□□□□□ -1.2
C9orf3-214ENST00000473778 A0A1B0GUV1 79 aa7.52□□□□□ -1.21
C9orf3-214ENST00000473778 INAFM2P0DMQ5 153 aa7.52□□□□□ -1.21
C9orf3-214ENST00000473778 LECT2O14960 151 aa7.52□□□□□ -1.21
C9orf3-214ENST00000473778 NANOS2P60321 138 aaKnown RBP7.52□□□□□ -1.21
C9orf3-214ENST00000473778 C14orf132Q9NPU4 83 aa7.52□□□□□ -1.21
C9orf3-214ENST00000473778 HIVEP1P15822 2718 aa7.52□□□□□ -1.21
C9orf3-214ENST00000473778 NOTCH2Q04721 2471 aa7.51□□□□□ -1.21
C9orf3-214ENST00000473778 LY6G6DO95868 133 aa7.51□□□□□ -1.21
C9orf3-214ENST00000473778 LINC00269Q8N2A0 174 aa7.51□□□□□ -1.21
C9orf3-214ENST00000473778 Q8NDZ9 215 aa7.51□□□□□ -1.21
C9orf3-214ENST00000473778 IGLV10-54A0A075B6I4 117 aa7.51□□□□□ -1.21
C9orf3-214ENST00000473778 KIAA0087Q14695 138 aa7.51□□□□□ -1.21
C9orf3-214ENST00000473778 SS18Q15532 418 aa7.51□□□□□ -1.21
C9orf3-214ENST00000473778 PRO0255Q9UI72 69 aa7.51□□□□□ -1.21
C9orf3-214ENST00000473778 C9orf116Q5BN46 136 aaPredicted RBP7.5□□□□□ -1.21
C9orf3-214ENST00000473778 Q8IZM0 81 aa7.5□□□□□ -1.21
C9orf3-214ENST00000473778 NSD1Q96L73 2696 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms