RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 HIGD2BQ4VC39 106 aa8.46□□□□□ -1.06
TPM3-216ENST00000473036 C14orf177Q52M58 125 aa8.46□□□□□ -1.06
TPM3-216ENST00000473036 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.06
TPM3-216ENST00000473036 IGLV4-69A0A075B6H9 119 aa8.45□□□□□ -1.06
TPM3-216ENST00000473036 hDV102S1A0JD36 115 aa8.45□□□□□ -1.06
TPM3-216ENST00000473036 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
TPM3-216ENST00000473036 CNBPP62633 177 aaKnown RBP8.45□□□□□ -1.06
TPM3-216ENST00000473036 LINC00526Q96FQ7 95 aa8.45□□□□□ -1.06
TPM3-216ENST00000473036 GVQW2A0A096LPI5 108 aaPredicted RBP8.44□□□□□ -1.06
TPM3-216ENST00000473036 F8WDY8 70 aa8.44□□□□□ -1.06
TPM3-216ENST00000473036 PANO1I0J062 215 aa8.44□□□□□ -1.06
TPM3-216ENST00000473036 COX6A2Q02221 97 aa8.44□□□□□ -1.06
TPM3-216ENST00000473036 SFTA2Q6UW10 78 aa8.44□□□□□ -1.06
TPM3-216ENST00000473036 C9orf163Q8N9P6 203 aa8.44□□□□□ -1.06
TPM3-216ENST00000473036 IGHV1-58A0A0C4DH39 117 aa8.43□□□□□ -1.06
TPM3-216ENST00000473036 C5orf38Q86SI9 138 aa8.43□□□□□ -1.06
TPM3-216ENST00000473036 CDKN2A-AS1Q9UH64 79 aa8.43□□□□□ -1.06
TPM3-216ENST00000473036 FLG2Q5D862 2391 aaPredicted RBP8.43□□□□□ -1.06
TPM3-216ENST00000473036 LRP1Q07954 4544 aaKnown RBP8.42□□□□□ -1.06
TPM3-216ENST00000473036 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
TPM3-216ENST00000473036 SDIM1Q6ZPB5 146 aa8.42□□□□□ -1.06
TPM3-216ENST00000473036 PRSS2P07478 247 aa8.41□□□□□ -1.06
TPM3-216ENST00000473036 IGHV3-64A0A075B6Q5 118 aa8.4□□□□□ -1.06
TPM3-216ENST00000473036 TMEM223A0PJW6 202 aa8.4□□□□□ -1.06
TPM3-216ENST00000473036 J3QL48 77 aa8.4□□□□□ -1.06
TPM3-216ENST00000473036 ZNF561-AS1K7EIQ3 104 aa8.4□□□□□ -1.06
TPM3-216ENST00000473036 SMR3BP02814 79 aaPredicted RBP8.4□□□□□ -1.06
TPM3-216ENST00000473036 S100A12P80511 92 aa8.4□□□□□ -1.06
TPM3-216ENST00000473036 PLEKHB2Q96CS7 222 aa8.4□□□□□ -1.06
TPM3-216ENST00000473036 PMCHL2Q9BQD1 86 aa8.4□□□□□ -1.06
TPM3-216ENST00000473036 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.06
TPM3-216ENST00000473036 CXCL5P42830 114 aa8.39□□□□□ -1.07
TPM3-216ENST00000473036 C6orf226Q5I0X4 101 aa8.39□□□□□ -1.07
TPM3-216ENST00000473036 SCXQ7RTU7 201 aa8.39□□□□□ -1.07
TPM3-216ENST00000473036 LOC105371267A0A1B0GV96 52 aa8.38□□□□□ -1.07
TPM3-216ENST00000473036 SMIM1B2RUZ4 78 aa8.38□□□□□ -1.07
TPM3-216ENST00000473036 E9PLD3 99 aa8.38□□□□□ -1.07
TPM3-216ENST00000473036 SMIM6P0DI80 62 aa8.38□□□□□ -1.07
TPM3-216ENST00000473036 Q8IZM0 81 aa8.38□□□□□ -1.07
TPM3-216ENST00000473036 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 LINC00587B1AMM8 73 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 LEPROTO15243 131 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 CHTF8P0CG12 524 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 NMUP48645 174 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 CKS1BP61024 79 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 SERTAD4-AS1Q5TG53 156 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 CIRBP-AS1Q8TBR5 109 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 ORAOV1Q8WV07 137 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 C2orf48Q96LS8 159 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 VAMP8Q9BV40 100 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
TPM3-216ENST00000473036 SPINK8P0C7L1 97 aa8.36□□□□□ -1.07
TPM3-216ENST00000473036 LGALS3P17931 250 aaKnown RBP8.36□□□□□ -1.07
TPM3-216ENST00000473036 PYY3Q5JQD4 70 aa8.36□□□□□ -1.07
TPM3-216ENST00000473036 COX7B2Q8TF08 81 aa8.36□□□□□ -1.07
TPM3-216ENST00000473036 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.35□□□□□ -1.07
TPM3-216ENST00000473036 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
TPM3-216ENST00000473036 HERV-K104P63124 156 aa8.35□□□□□ -1.07
TPM3-216ENST00000473036 CIRBPQ14011 172 aaKnown RBP8.35□□□□□ -1.07
TPM3-216ENST00000473036 KIAA0087Q14695 138 aa8.35□□□□□ -1.07
TPM3-216ENST00000473036 Q6ZRU5 148 aa8.35□□□□□ -1.07
TPM3-216ENST00000473036 MYMXA0A1B0GTQ4 84 aa8.34□□□□□ -1.07
TPM3-216ENST00000473036 J3QQQ9 107 aa8.34□□□□□ -1.07
TPM3-216ENST00000473036 SPAG11BQ08648 103 aa8.34□□□□□ -1.07
TPM3-216ENST00000473036 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
TPM3-216ENST00000473036 ATOH7Q8N100 152 aa8.34□□□□□ -1.07
TPM3-216ENST00000473036 STPG4Q8N801 248 aa8.34□□□□□ -1.07
TPM3-216ENST00000473036 TOMM7Q9P0U1 55 aa8.34□□□□□ -1.07
TPM3-216ENST00000473036 NDUFA1O15239 70 aa8.33□□□□□ -1.08
TPM3-216ENST00000473036 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
TPM3-216ENST00000473036 SYCNQ0VAF6 134 aa8.33□□□□□ -1.08
TPM3-216ENST00000473036 CARD19Q96LW7 228 aa8.33□□□□□ -1.08
TPM3-216ENST00000473036 TNXBP22105 4242 aa8.32□□□□□ -1.08
TPM3-216ENST00000473036 A0A096LNI7 61 aa8.32□□□□□ -1.08
TPM3-216ENST00000473036 RNF151Q2KHN1 245 aa8.32□□□□□ -1.08
TPM3-216ENST00000473036 SPACA4Q8TDM5 124 aa8.32□□□□□ -1.08
TPM3-216ENST00000473036 CAMK2N2Q96S95 79 aa8.32□□□□□ -1.08
TPM3-216ENST00000473036 TRBV30A0A0K0K1B3 111 aa8.31□□□□□ -1.08
TPM3-216ENST00000473036 KRTAP10-4P60372 401 aaPredicted RBP8.31□□□□□ -1.08
TPM3-216ENST00000473036 NDUFA12Q9UI09 145 aa8.31□□□□□ -1.08
TPM3-216ENST00000473036 COX17Q14061 63 aa8.3□□□□□ -1.08
TPM3-216ENST00000473036 SPATA45Q537H7 98 aa8.3□□□□□ -1.08
TPM3-216ENST00000473036 UNQ6190/PRO20217Q6UXQ8 127 aa8.3□□□□□ -1.08
TPM3-216ENST00000473036 HMCN2Q8NDA2 5059 aa8.29□□□□□ -1.08
TPM3-216ENST00000473036 A0A087WYN8 130 aa8.29□□□□□ -1.08
TPM3-216ENST00000473036 IGKV2-24A0A0C4DH68 120 aa8.29□□□□□ -1.08
TPM3-216ENST00000473036 DLEU1O43261 78 aa8.29□□□□□ -1.08
TPM3-216ENST00000473036 LCE2DQ5TA82 110 aaPredicted RBP8.29□□□□□ -1.08
TPM3-216ENST00000473036 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
TPM3-216ENST00000473036 LINC00528Q8N1L1 170 aa8.29□□□□□ -1.08
TPM3-216ENST00000473036 C6orf48Q9UBA6 75 aa8.29□□□□□ -1.08
TPM3-216ENST00000473036 PAM16Q9Y3D7 125 aa8.29□□□□□ -1.08
TPM3-216ENST00000473036 UBR4Q5T4S7 5183 aa8.29□□□□□ -1.08
TPM3-216ENST00000473036 ANKRD39Q53RE8 183 aa8.28□□□□□ -1.08
TPM3-216ENST00000473036 ZNF815PA8K554 130 aa8.27□□□□□ -1.09
TPM3-216ENST00000473036 COX8AP10176 69 aa8.27□□□□□ -1.09
TPM3-216ENST00000473036 COPS9Q8WXC6 57 aa8.27□□□□□ -1.09
TPM3-216ENST00000473036 ZNF625Q96I27 306 aaPredicted RBP8.27□□□□□ -1.09
TPM3-216ENST00000473036 PLAC8Q9NZF1 115 aa8.27□□□□□ -1.09
TPM3-216ENST00000473036 MAJINQ3KP22 176 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms