RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 IGHV1-58A0A0C4DH39 117 aa4.16□□□□□ -1.74
PTP4A1-202ENST00000470661 A0A1W2PNN7 141 aa4.16□□□□□ -1.74
PTP4A1-202ENST00000470661 COX7A2LO14548 114 aa4.16□□□□□ -1.74
PTP4A1-202ENST00000470661 IMMP2LQ96T52 175 aa4.16□□□□□ -1.74
PTP4A1-202ENST00000470661 C20orf78Q9BR46 151 aa4.16□□□□□ -1.74
PTP4A1-202ENST00000470661 SMDT1Q9H4I9 107 aa4.16□□□□□ -1.74
PTP4A1-202ENST00000470661 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.74
PTP4A1-202ENST00000470661 LINC00862A6NCI5 91 aa4.15□□□□□ -1.75
PTP4A1-202ENST00000470661 C1orf196B1AJZ1 125 aa4.15□□□□□ -1.75
PTP4A1-202ENST00000470661 F8W036 122 aa4.15□□□□□ -1.75
PTP4A1-202ENST00000470661 MT-ND4LP03901 98 aa4.15□□□□□ -1.75
PTP4A1-202ENST00000470661 SYCNQ0VAF6 134 aa4.15□□□□□ -1.75
PTP4A1-202ENST00000470661 CIRBPQ14011 172 aaKnown RBP4.15□□□□□ -1.75
PTP4A1-202ENST00000470661 CLLU1Q5K131 121 aa4.15□□□□□ -1.75
PTP4A1-202ENST00000470661 ORMDL3Q8N138 153 aa4.15□□□□□ -1.75
PTP4A1-202ENST00000470661 CARD19Q96LW7 228 aa4.15□□□□□ -1.75
PTP4A1-202ENST00000470661 A0A1B0GW15 77 aa4.14□□□□□ -1.75
PTP4A1-202ENST00000470661 FAM168BA1KXE4 195 aa4.14□□□□□ -1.75
PTP4A1-202ENST00000470661 TMEM218A2RU14 115 aa4.14□□□□□ -1.75
PTP4A1-202ENST00000470661 PPP1R2P9O14990 202 aa4.14□□□□□ -1.75
PTP4A1-202ENST00000470661 PPP1R17O96001 155 aa4.14□□□□□ -1.75
PTP4A1-202ENST00000470661 RAB5AP20339 215 aa4.14□□□□□ -1.75
PTP4A1-202ENST00000470661 IFI27P40305 119 aaPredicted RBP4.14□□□□□ -1.75
PTP4A1-202ENST00000470661 UNQ6190/PRO20217Q6UXQ8 127 aa4.14□□□□□ -1.75
PTP4A1-202ENST00000470661 COMMD7Q86VX2 200 aa4.14□□□□□ -1.75
PTP4A1-202ENST00000470661 PLAC8Q9NZF1 115 aa4.14□□□□□ -1.75
PTP4A1-202ENST00000470661 IGLV4-3A0A075B6K6 122 aa4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 S100A8P05109 93 aa4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 RPL32P62910 135 aaKnown RBP4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 SPAG11BQ08648 103 aa4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 C9orf116Q5BN46 136 aaPredicted RBP4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 C2orf82Q6UX34 121 aa4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 ATP5L2Q7Z4Y8 100 aa4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 KRTAP11-1Q8IUC1 163 aa4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 ORAOV1Q8WV07 137 aa4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 CAMK2N2Q96S95 79 aa4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 TIMM21Q9BVV7 248 aa4.13□□□□□ -1.75
PTP4A1-202ENST00000470661 IGHV3OR16-9A0A0B4J2B5 98 aa4.12□□□□□ -1.75
PTP4A1-202ENST00000470661 MT1HL1P0DM35 61 aa4.12□□□□□ -1.75
PTP4A1-202ENST00000470661 RPL18AQ02543 176 aaKnown RBP4.12□□□□□ -1.75
PTP4A1-202ENST00000470661 LINC00242Q5T6M2 205 aa4.12□□□□□ -1.75
PTP4A1-202ENST00000470661 LINC00173Q6ZV60 143 aa4.12□□□□□ -1.75
PTP4A1-202ENST00000470661 PHF5AQ7RTV0 110 aaKnown RBP4.12□□□□□ -1.75
PTP4A1-202ENST00000470661 Q8N8P6 123 aa4.12□□□□□ -1.75
PTP4A1-202ENST00000470661 MAP1LC3AQ9H492 121 aa4.12□□□□□ -1.75
PTP4A1-202ENST00000470661 CSDC2Q9Y534 153 aaKnown RBP4.12□□□□□ -1.75
PTP4A1-202ENST00000470661 PPBPP02775 128 aa4.11□□□□□ -1.75
PTP4A1-202ENST00000470661 MRPS36P82909 103 aaKnown RBP4.11□□□□□ -1.75
PTP4A1-202ENST00000470661 KIAA0087Q14695 138 aa4.11□□□□□ -1.75
PTP4A1-202ENST00000470661 C2orf66Q6UXQ4 117 aa4.11□□□□□ -1.75
PTP4A1-202ENST00000470661 ALKBH7Q9BT30 221 aaPredicted RBP4.11□□□□□ -1.75
PTP4A1-202ENST00000470661 SPANXA1Q9NS26 97 aa4.11□□□□□ -1.75
PTP4A1-202ENST00000470661 C6orf48Q9UBA6 75 aa4.11□□□□□ -1.75
PTP4A1-202ENST00000470661 TGIF2-C20orf24A0A0A6YYL0 155 aa4.1□□□□□ -1.75
PTP4A1-202ENST00000470661 LOC107984640A0A0U1RRK4 108 aa4.1□□□□□ -1.75
PTP4A1-202ENST00000470661 IGIPA6NJ69 53 aa4.1□□□□□ -1.75
PTP4A1-202ENST00000470661 UBE2D1P51668 147 aa4.1□□□□□ -1.75
PTP4A1-202ENST00000470661 NDUFV3P56181 108 aaKnown RBP4.1□□□□□ -1.75
PTP4A1-202ENST00000470661 PRR3P79522 188 aaKnown RBP4.1□□□□□ -1.75
PTP4A1-202ENST00000470661 LINC00469Q8N7U9 141 aa4.1□□□□□ -1.75
PTP4A1-202ENST00000470661 TMEM141Q96I45 108 aa4.1□□□□□ -1.75
PTP4A1-202ENST00000470661 TOMM7Q9P0U1 55 aa4.1□□□□□ -1.75
PTP4A1-202ENST00000470661 APOMO95445 188 aa4.09□□□□□ -1.75
PTP4A1-202ENST00000470661 OXTP01178 125 aa4.09□□□□□ -1.75
PTP4A1-202ENST00000470661 FABP9Q0Z7S8 132 aa4.09□□□□□ -1.75
PTP4A1-202ENST00000470661 PMCHL1Q16048 86 aa4.09□□□□□ -1.75
PTP4A1-202ENST00000470661 FAM19A5Q7Z5A7 132 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-202ENST00000470661 C7orf33Q8WU49 177 aa4.09□□□□□ -1.75
PTP4A1-202ENST00000470661 VCX2Q9H322 139 aa4.09□□□□□ -1.75
PTP4A1-202ENST00000470661 CYSLTR1Q9Y271 337 aa4.09□□□□□ -1.75
PTP4A1-202ENST00000470661 SMAGPQ0VAQ4 97 aa4.08□□□□□ -1.76
PTP4A1-202ENST00000470661 UQCC3Q6UW78 93 aa4.08□□□□□ -1.76
PTP4A1-202ENST00000470661 TEX43Q6ZNM6 134 aa4.08□□□□□ -1.76
PTP4A1-202ENST00000470661 SCGB3A1Q96QR1 104 aa4.08□□□□□ -1.76
PTP4A1-202ENST00000470661 AMELXQ99217 191 aa4.08□□□□□ -1.76
PTP4A1-202ENST00000470661 SEC11CQ9BY50 192 aa4.08□□□□□ -1.76
PTP4A1-202ENST00000470661 CDKN2A-AS1Q9UH64 79 aa4.08□□□□□ -1.76
PTP4A1-202ENST00000470661 NDUFA1O15239 70 aa4.07□□□□□ -1.76
PTP4A1-202ENST00000470661 APOC3P02656 99 aa4.07□□□□□ -1.76
PTP4A1-202ENST00000470661 C9orf129Q5T035 196 aaKnown RBP4.07□□□□□ -1.76
PTP4A1-202ENST00000470661 C10orf91Q5T1B1 145 aa4.07□□□□□ -1.76
PTP4A1-202ENST00000470661 OR10D4PQ8NGN7 298 aa4.07□□□□□ -1.76
PTP4A1-202ENST00000470661 TOMM6Q96B49 74 aa4.07□□□□□ -1.76
PTP4A1-202ENST00000470661 XAGE1AQ9HD64 81 aa4.07□□□□□ -1.76
PTP4A1-202ENST00000470661 PSORS1C2Q9UIG4 136 aa4.07□□□□□ -1.76
PTP4A1-202ENST00000470661 LRP2P98164 4655 aa4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 MT-ND6P03923 174 aa4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 SPINK8P0C7L1 97 aa4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 NDUFA6P56556 154 aa4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 RAB5BP61020 215 aa4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 ORMDL2Q53FV1 153 aa4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 C1orf137Q5JT78 98 aa4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 C2orf88Q9BSF0 95 aa4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 GNB1LQ9BYB4 327 aa4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 NXT2Q9NPJ8 142 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 MRPL35Q9NZE8 188 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 LAMTOR2Q9Y2Q5 125 aa4.06□□□□□ -1.76
PTP4A1-202ENST00000470661 SCO1O75880 301 aa4.05□□□□□ -1.76
PTP4A1-202ENST00000470661 S100PP25815 95 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 224.5 ms