RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SPATA45Q537H7 98 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 TTC32Q5I0X7 151 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 LINC00242Q5T6M2 205 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 LINC01561Q8N1V8 128 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 LINC00469Q8N7U9 141 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 PLEKHB2Q96CS7 222 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 RMI2Q96E14 147 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 KLK12Q9UKR0 248 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 PAM16Q9Y3D7 125 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 PKD1P98161 4303 aa4.49□□□□□ -1.69
VAMP3-202ENST00000470357 IGKV3OR2-268A0A0C4DH90 116 aa4.48□□□□□ -1.69
VAMP3-202ENST00000470357 hDV102S1A0JD36 115 aa4.48□□□□□ -1.69
VAMP3-202ENST00000470357 TMEM223A0PJW6 202 aa4.48□□□□□ -1.69
VAMP3-202ENST00000470357 CD164L2Q6UWJ8 174 aa4.48□□□□□ -1.69
VAMP3-202ENST00000470357 STPG4Q8N801 248 aa4.48□□□□□ -1.69
VAMP3-202ENST00000470357 CHCHD10Q8WYQ3 142 aaPredicted RBP4.48□□□□□ -1.69
VAMP3-202ENST00000470357 UBE2WQ96B02 151 aa4.48□□□□□ -1.69
VAMP3-202ENST00000470357 Q9H8V8 135 aa4.48□□□□□ -1.69
VAMP3-202ENST00000470357 A0A087WZ39 114 aa4.47□□□□□ -1.69
VAMP3-202ENST00000470357 IGHV3OR16-9A0A0B4J2B5 98 aa4.47□□□□□ -1.69
VAMP3-202ENST00000470357 IBA57-AS1B1ANH7 110 aa4.47□□□□□ -1.69
VAMP3-202ENST00000470357 COX7A2LO14548 114 aa4.47□□□□□ -1.69
VAMP3-202ENST00000470357 LEPROTO15243 131 aa4.47□□□□□ -1.69
VAMP3-202ENST00000470357 DLEU1O43261 78 aa4.47□□□□□ -1.69
VAMP3-202ENST00000470357 APOMO95445 188 aa4.47□□□□□ -1.69
VAMP3-202ENST00000470357 LGALS3P17931 250 aaKnown RBP4.47□□□□□ -1.69
VAMP3-202ENST00000470357 SFTA2Q6UW10 78 aa4.47□□□□□ -1.69
VAMP3-202ENST00000470357 UQCR10Q9UDW1 63 aa4.47□□□□□ -1.69
VAMP3-202ENST00000470357 CDKN2A-AS1Q9UH64 79 aa4.47□□□□□ -1.69
VAMP3-202ENST00000470357 IGHV1-58A0A0C4DH39 117 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 A4D1N5 150 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 LY6G6CO95867 125 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 COX8AP10176 69 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 XCL1P47992 114 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 NMUP48645 174 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 SLC25A34Q6PIV7 304 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 CLPSL2Q6UWE3 100 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 ENHOQ6UWT2 76 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 MIEN1Q9BRT3 115 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 TM2D2Q9BX73 214 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 HSPG2P98160 4391 aa4.46□□□□□ -1.7
VAMP3-202ENST00000470357 IGLV5-39A0A0G2JS06 123 aa4.45□□□□□ -1.7
VAMP3-202ENST00000470357 SMIM1B2RUZ4 78 aa4.45□□□□□ -1.7
VAMP3-202ENST00000470357 J3QQQ9 107 aa4.45□□□□□ -1.7
VAMP3-202ENST00000470357 COX6A2Q02221 97 aa4.45□□□□□ -1.7
VAMP3-202ENST00000470357 MAJINQ3KP22 176 aa4.45□□□□□ -1.7
VAMP3-202ENST00000470357 IGLV10-54A0A075B6I4 117 aa4.44□□□□□ -1.7
VAMP3-202ENST00000470357 IGKV2D-24A0A075B6R9 120 aa4.44□□□□□ -1.7
VAMP3-202ENST00000470357 PRSS2P07478 247 aa4.44□□□□□ -1.7
VAMP3-202ENST00000470357 SPINK8P0C7L1 97 aa4.44□□□□□ -1.7
VAMP3-202ENST00000470357 CXCL5P42830 114 aa4.44□□□□□ -1.7
VAMP3-202ENST00000470357 HERV-K104P63124 156 aa4.44□□□□□ -1.7
VAMP3-202ENST00000470357 C5orf38Q86SI9 138 aa4.44□□□□□ -1.7
VAMP3-202ENST00000470357 BOD1L2Q8IYS8 172 aa4.44□□□□□ -1.7
VAMP3-202ENST00000470357 PRO1933Q9H354 126 aa4.44□□□□□ -1.7
VAMP3-202ENST00000470357 LRP1BQ9NZR2 4599 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 IGHV3-64A0A075B6Q5 118 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 IGKV2D-26A0A0A0MRZ7 120 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 NBDYA0A0U1RRE5 68 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 MYMXA0A1B0GTQ4 84 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 ZNF815PA8K554 130 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 LINC00587B1AMM8 73 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 F8WDY8 70 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 SCGB1D4Q6XE38 83 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 Q8IZM0 81 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 COX7B2Q8TF08 81 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 C14orf144Q96I85 54 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 Q9HAA7 133 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 HIGD1BQ9P298 99 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 NDUFA12Q9UI09 145 aa4.43□□□□□ -1.7
VAMP3-202ENST00000470357 APOBP04114 4563 aaKnown RBP4.43□□□□□ -1.7
VAMP3-202ENST00000470357 NDUFA1O15239 70 aa4.42□□□□□ -1.7
VAMP3-202ENST00000470357 DDTP30046 118 aa4.42□□□□□ -1.7
VAMP3-202ENST00000470357 PCP4P48539 62 aa4.42□□□□□ -1.7
VAMP3-202ENST00000470357 HNRNPA3P51991 378 aaKnown RBP4.42□□□□□ -1.7
VAMP3-202ENST00000470357 CKS1BP61024 79 aa4.42□□□□□ -1.7
VAMP3-202ENST00000470357 CIRBPQ14011 172 aaKnown RBP4.42□□□□□ -1.7
VAMP3-202ENST00000470357 C6orf226Q5I0X4 101 aa4.42□□□□□ -1.7
VAMP3-202ENST00000470357 PCP2Q8IVA1 136 aa4.42□□□□□ -1.7
VAMP3-202ENST00000470357 ORAOV1Q8WV07 137 aa4.42□□□□□ -1.7
VAMP3-202ENST00000470357 TOMM7Q9P0U1 55 aa4.42□□□□□ -1.7
VAMP3-202ENST00000470357 DNAH5Q8TE73 4624 aa4.42□□□□□ -1.7
VAMP3-202ENST00000470357 TMEM238C9JI98 176 aa4.41□□□□□ -1.7
VAMP3-202ENST00000470357 PSCAO43653 123 aa4.41□□□□□ -1.7
VAMP3-202ENST00000470357 TIMM17BO60830 172 aa4.41□□□□□ -1.7
VAMP3-202ENST00000470357 TAL2Q16559 108 aa4.41□□□□□ -1.7
VAMP3-202ENST00000470357 KRTAP26-1Q6PEX3 210 aa4.41□□□□□ -1.7
VAMP3-202ENST00000470357 COPS9Q8WXC6 57 aa4.41□□□□□ -1.7
VAMP3-202ENST00000470357 A0A1B0GVY2 172 aa4.4□□□□□ -1.71
VAMP3-202ENST00000470357 M0R143 59 aa4.4□□□□□ -1.71
VAMP3-202ENST00000470357 TSPEAR-AS2P59090 65 aa4.4□□□□□ -1.71
VAMP3-202ENST00000470357 SPAG11BQ08648 103 aa4.4□□□□□ -1.71
VAMP3-202ENST00000470357 C14orf177Q52M58 125 aa4.4□□□□□ -1.71
VAMP3-202ENST00000470357 Q6ZVH6 145 aa4.4□□□□□ -1.71
VAMP3-202ENST00000470357 ZNF625Q96I27 306 aaPredicted RBP4.4□□□□□ -1.71
VAMP3-202ENST00000470357 C2orf48Q96LS8 159 aa4.4□□□□□ -1.71
VAMP3-202ENST00000470357 GVQW2A0A096LPI5 108 aaPredicted RBP4.39□□□□□ -1.71
VAMP3-202ENST00000470357 A0A0J9YXY3 114 aa4.39□□□□□ -1.71
VAMP3-202ENST00000470357 PCP4L1A6NKN8 68 aa4.39□□□□□ -1.71
VAMP3-202ENST00000470357 HSD52Q0P140 79 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms