RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 GCSHP23434 173 aa12.87□□□□□ -0.35
PCGF3-208ENST00000470161 ORAOV1Q8WV07 137 aa12.86□□□□□ -0.35
PCGF3-208ENST00000470161 HIST1H4GQ99525 98 aa12.86□□□□□ -0.35
PCGF3-208ENST00000470161 IGLV5-39A0A0G2JS06 123 aa12.86□□□□□ -0.35
PCGF3-208ENST00000470161 LRCOL1A6NCL2 159 aa12.86□□□□□ -0.35
PCGF3-208ENST00000470161 REG3AQ06141 175 aa12.86□□□□□ -0.35
PCGF3-208ENST00000470161 PRR34Q9NV39 138 aa12.85□□□□□ -0.35
PCGF3-208ENST00000470161 NDUFA12Q9UI09 145 aa12.85□□□□□ -0.35
PCGF3-208ENST00000470161 SS18Q15532 418 aa12.84□□□□□ -0.35
PCGF3-208ENST00000470161 LECT2O14960 151 aa12.83□□□□□ -0.35
PCGF3-208ENST00000470161 CCL25O15444 150 aa12.83□□□□□ -0.35
PCGF3-208ENST00000470161 FXYD2P54710 66 aa12.83□□□□□ -0.35
PCGF3-208ENST00000470161 TAL2Q16559 108 aa12.83□□□□□ -0.35
PCGF3-208ENST00000470161 CEND1Q8N111 149 aa12.83□□□□□ -0.35
PCGF3-208ENST00000470161 XCL1P47992 114 aa12.83□□□□□ -0.36
PCGF3-208ENST00000470161 IGHV3OR16-9A0A0B4J2B5 98 aa12.82□□□□□ -0.36
PCGF3-208ENST00000470161 Q8N814 137 aa12.82□□□□□ -0.36
PCGF3-208ENST00000470161 TRAV8-4A0A0B4J246 113 aa12.81□□□□□ -0.36
PCGF3-208ENST00000470161 A0A0J9YXY3 114 aa12.81□□□□□ -0.36
PCGF3-208ENST00000470161 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■■■□□ 17.7
PCGF3-208ENST00000470161 C5orf38Q86SI9 138 aa12.81□□□□□ -0.36
PCGF3-208ENST00000470161 IGLV10-54A0A075B6I4 117 aa12.8□□□□□ -0.36
PCGF3-208ENST00000470161 SRSF9Q13242 221 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCGF3-208ENST00000470161 Q6ZVH6 145 aa12.8□□□□□ -0.36
PCGF3-208ENST00000470161 IGLV5-52A0A0A0MRZ9 124 aa12.8□□□□□ -0.36
PCGF3-208ENST00000470161 PTTG1IPP53801 180 aa12.8□□□□□ -0.36
PCGF3-208ENST00000470161 NTN5Q8WTR8 489 aaPredicted RBP12.8□□□□□ -0.36
PCGF3-208ENST00000470161 A6NDN8 102 aa12.79□□□□□ -0.36
PCGF3-208ENST00000470161 NDUFA1O15239 70 aa12.79□□□□□ -0.36
PCGF3-208ENST00000470161 SPANXB1Q9NS25 103 aaPredicted RBP12.79□□□□□ -0.36
PCGF3-208ENST00000470161 A0A087WZ39 114 aa12.78□□□□□ -0.36
PCGF3-208ENST00000470161 WFDC2Q14508 124 aa12.78□□□□□ -0.36
PCGF3-208ENST00000470161 CHCHD10Q8WYQ3 142 aaPredicted RBP12.78□□□□□ -0.36
PCGF3-208ENST00000470161 DNAH5Q8TE73 4624 aa12.78□□□□□ -0.36
PCGF3-208ENST00000470161 TAX1BP3O14907 124 aa12.77□□□□□ -0.36
PCGF3-208ENST00000470161 C14orf177Q52M58 125 aa12.77□□□□□ -0.37
PCGF3-208ENST00000470161 TOMM7Q9P0U1 55 aa12.77□□□□□ -0.37
PCGF3-208ENST00000470161 DYNC1H1Q14204 4646 aaKnown RBP12.76□□□□□ -0.37
PCGF3-208ENST00000470161 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.76□□□□□ -0.37
PCGF3-208ENST00000470161 COX7B2Q8TF08 81 aa12.76□□□□□ -0.37
PCGF3-208ENST00000470161 TMEM238C9JI98 176 aa12.75□□□□□ -0.37
PCGF3-208ENST00000470161 NHP2Q9NX24 153 aaKnown RBP12.75□□□□□ -0.37
PCGF3-208ENST00000470161 K7ERJ3 54 aa12.74□□□□□ -0.37
PCGF3-208ENST00000470161 CD164L2Q6UWJ8 174 aa12.74□□□□□ -0.37
PCGF3-208ENST00000470161 LITAFQ99732 161 aa12.74□□□□□ -0.37
PCGF3-208ENST00000470161 ZNF625Q96I27 306 aaPredicted RBP12.73□□□□□ -0.37
PCGF3-208ENST00000470161 USP17L23D6RBM5 183 aa12.72□□□□□ -0.37
PCGF3-208ENST00000470161 RAB37Q96AX2 223 aa12.72□□□□□ -0.37
PCGF3-208ENST00000470161 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.37
PCGF3-208ENST00000470161 COX7A2LO14548 114 aa12.71□□□□□ -0.37
PCGF3-208ENST00000470161 SMIM13P0DJ93 91 aa12.71□□□□□ -0.37
PCGF3-208ENST00000470161 FOXI1Q12951 378 aa12.71□□□□□ -0.37
PCGF3-208ENST00000470161 ADAMTSL4-AS1Q5T5F5 129 aa12.71□□□□□ -0.37
PCGF3-208ENST00000470161 CDK2AP2O75956 126 aa12.7□□□□□ -0.38
PCGF3-208ENST00000470161 KRTAP26-1Q6PEX3 210 aa12.7□□□□□ -0.38
PCGF3-208ENST00000470161 LINC01561Q8N1V8 128 aa12.7□□□□□ -0.38
PCGF3-208ENST00000470161 LRP1BQ9NZR2 4599 aa12.7□□□□□ -0.38
PCGF3-208ENST00000470161 TIMM17BO60830 172 aa12.69□□□□□ -0.38
PCGF3-208ENST00000470161 MUSTN1Q8IVN3 82 aa12.69□□□□□ -0.38
PCGF3-208ENST00000470161 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
PCGF3-208ENST00000470161 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
PCGF3-208ENST00000470161 TMEM238LA0A1B0GVL6 79 aa12.68□□□□□ -0.38
PCGF3-208ENST00000470161 A6NJY4 79 aa12.68□□□□□ -0.38
PCGF3-208ENST00000470161 HERV-K104P63124 156 aa12.68□□□□□ -0.38
PCGF3-208ENST00000470161 MEIG1Q5JSS6 88 aa12.68□□□□□ -0.38
PCGF3-208ENST00000470161 A0A0U1RRA0 63 aa12.67□□□□□ -0.38
PCGF3-208ENST00000470161 MALP21145 153 aa12.67□□□□□ -0.38
PCGF3-208ENST00000470161 KRTAP10-1P60331 282 aa12.67□□□□□ -0.38
PCGF3-208ENST00000470161 NPC2P61916 151 aa12.67□□□□□ -0.38
PCGF3-208ENST00000470161 CFAP161Q6P656 301 aa12.67□□□□□ -0.38
PCGF3-208ENST00000470161 DAND5Q8N907 189 aa12.67□□□□□ -0.38
PCGF3-208ENST00000470161 NAA38Q9BRA0 125 aaKnown RBP12.67□□□□□ -0.38
PCGF3-208ENST00000470161 A0A1B0GWB2 263 aa12.66□□□□□ -0.38
PCGF3-208ENST00000470161 PRSS2P07478 247 aa12.66□□□□□ -0.38
PCGF3-208ENST00000470161 CIRBPQ14011 172 aaKnown RBP12.66□□□□□ -0.38
PCGF3-208ENST00000470161 C9orf118A6NHY6 69 aa12.65□□□□□ -0.38
PCGF3-208ENST00000470161 C6orf226Q5I0X4 101 aa12.65□□□□□ -0.38
PCGF3-208ENST00000470161 Q8IZM0 81 aa12.65□□□□□ -0.38
PCGF3-208ENST00000470161 A4D1N5 150 aa12.64□□□□□ -0.39
PCGF3-208ENST00000470161 APOMO95445 188 aa12.64□□□□□ -0.39
PCGF3-208ENST00000470161 RPL24P83731 157 aaKnown RBP12.64□□□□□ -0.39
PCGF3-208ENST00000470161 KIAA1109Q2LD37 5005 aa12.64□□□□□ -0.39
PCGF3-208ENST00000470161 H3BUT2 72 aa12.64□□□□□ -0.39
PCGF3-208ENST00000470161 C2orf82Q6UX34 121 aa12.62□□□□□ -0.39
PCGF3-208ENST00000470161 CFC1BP0CG36 223 aa12.61□□□□□ -0.39
PCGF3-208ENST00000470161 CFC1P0CG37 223 aa12.61□□□□□ -0.39
PCGF3-208ENST00000470161 KIAA0087Q14695 138 aa12.61□□□□□ -0.39
PCGF3-208ENST00000470161 LINC01620Q4KN68 170 aa12.61□□□□□ -0.39
PCGF3-208ENST00000470161 EIF4EBP3O60516 100 aaPredicted RBP12.61□□□□□ -0.39
PCGF3-208ENST00000470161 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.6□□□□□ -0.39
PCGF3-208ENST00000470161 VAMP3Q15836 100 aa12.6□□□□□ -0.39
PCGF3-208ENST00000470161 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
PCGF3-208ENST00000470161 IFITM1P13164 125 aa12.59□□□□□ -0.39
PCGF3-208ENST00000470161 CKS1BP61024 79 aa12.59□□□□□ -0.39
PCGF3-208ENST00000470161 SPAG11BQ08648 103 aa12.59□□□□□ -0.39
PCGF3-208ENST00000470161 LINC00308Q8TCZ7 52 aa12.59□□□□□ -0.39
PCGF3-208ENST00000470161 LINC00158P58513 81 aa12.57□□□□□ -0.4
PCGF3-208ENST00000470161 HIGD2BQ4VC39 106 aa12.57□□□□□ -0.4
PCGF3-208ENST00000470161 SOSTDC1Q6X4U4 206 aa12.57□□□□□ -0.4
PCGF3-208ENST00000470161 C15orf56Q8N910 161 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms