RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 C12orf57Q99622 126 aa4.55□□□□□ -1.68
LSM2-210ENST00000470086 RNASE7Q9H1E1 156 aaKnown RBP4.55□□□□□ -1.68
LSM2-210ENST00000470086 IGLV9-49A0A0B4J1Y8 123 aa4.54□□□□□ -1.68
LSM2-210ENST00000470086 TLX1NBP0CAT3 122 aa4.54□□□□□ -1.68
LSM2-210ENST00000470086 ESDP10768 282 aa4.54□□□□□ -1.68
LSM2-210ENST00000470086 AKR1C3P42330 323 aa4.54□□□□□ -1.68
LSM2-210ENST00000470086 FOXA3P55318 350 aaPredicted RBP4.54□□□□□ -1.68
LSM2-210ENST00000470086 MRPL55Q7Z7F7 128 aaKnown RBP4.54□□□□□ -1.68
LSM2-210ENST00000470086 KRTAP13-1Q8IUC0 172 aa4.54□□□□□ -1.68
LSM2-210ENST00000470086 HIST1H2BAQ96A08 127 aa4.54□□□□□ -1.68
LSM2-210ENST00000470086 CDC42SE2Q9NRR3 84 aa4.54□□□□□ -1.68
LSM2-210ENST00000470086 G3V3Q6 166 aa4.53□□□□□ -1.68
LSM2-210ENST00000470086 COX7A2LO14548 114 aa4.53□□□□□ -1.68
LSM2-210ENST00000470086 CTRLP40313 264 aa4.53□□□□□ -1.68
LSM2-210ENST00000470086 RPL24P83731 157 aaKnown RBP4.53□□□□□ -1.68
LSM2-210ENST00000470086 PMVKQ15126 192 aa4.53□□□□□ -1.68
LSM2-210ENST00000470086 VPS25Q9BRG1 176 aa4.53□□□□□ -1.68
LSM2-210ENST00000470086 TMEM242Q9NWH2 141 aa4.53□□□□□ -1.68
LSM2-210ENST00000470086 MRPL35Q9NZE8 188 aaKnown RBP4.53□□□□□ -1.68
LSM2-210ENST00000470086 ZNF25P17030 456 aaPredicted RBP4.52□□□□□ -1.69
LSM2-210ENST00000470086 Q6ZUT4 128 aa4.52□□□□□ -1.69
LSM2-210ENST00000470086 FAM104AQ969W3 186 aa4.52□□□□□ -1.69
LSM2-210ENST00000470086 TCEAL7Q9BRU2 100 aa4.52□□□□□ -1.69
LSM2-210ENST00000470086 PSMG3Q9BT73 122 aaPredicted RBP4.52□□□□□ -1.69
LSM2-210ENST00000470086 SDHAF1A6NFY7 115 aa4.51□□□□□ -1.69
LSM2-210ENST00000470086 UPK1BO75841 260 aa4.51□□□□□ -1.69
LSM2-210ENST00000470086 ORAOV1Q8WV07 137 aa4.51□□□□□ -1.69
LSM2-210ENST00000470086 CTXND1A0A1B0GTU2 59 aa4.5□□□□□ -1.69
LSM2-210ENST00000470086 A0A1B0GWB2 263 aa4.5□□□□□ -1.69
LSM2-210ENST00000470086 H7C423 109 aa4.5□□□□□ -1.69
LSM2-210ENST00000470086 NCR2O95944 276 aa4.5□□□□□ -1.69
LSM2-210ENST00000470086 PFN2P35080 140 aa4.5□□□□□ -1.69
LSM2-210ENST00000470086 KIAA0087Q14695 138 aa4.5□□□□□ -1.69
LSM2-210ENST00000470086 CNPY1Q3B7I2 92 aa4.5□□□□□ -1.69
LSM2-210ENST00000470086 LYZL1Q6UWQ5 148 aa4.5□□□□□ -1.69
LSM2-210ENST00000470086 Q6ZVH6 145 aa4.5□□□□□ -1.69
LSM2-210ENST00000470086 CCDC32Q9BV29 185 aa4.5□□□□□ -1.69
LSM2-210ENST00000470086 TRAV13-1A0A0B4J241 112 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 E9PLD3 99 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 DLEU1O43261 78 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 NUPR1O60356 82 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 RAB5BP61020 215 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 CKS1BP61024 79 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 C2orf82Q6UX34 121 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 LINC00337Q8N6G1 96 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 BORCS7Q96B45 105 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 SPANXCQ9NY87 97 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 C22orf24Q9Y442 160 aa4.49□□□□□ -1.69
LSM2-210ENST00000470086 IGLV5-45A0A087WSX0 123 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 MAP1LC3B2A6NCE7 125 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 NDUFA1O15239 70 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 BCE1O60756 84 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 IFITM2Q01629 132 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 FP248Q71RG6 208 aaPredicted RBP4.48□□□□□ -1.69
LSM2-210ENST00000470086 OR10D4PQ8NGN7 298 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 MARVELD1Q9BSK0 173 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 MAP1LC3BQ9GZQ8 125 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 SS18L2Q9UHA2 77 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 TNFSF18Q9UNG2 199 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 UBE2D4Q9Y2X8 147 aa4.48□□□□□ -1.69
LSM2-210ENST00000470086 M0R2T5 61 aa4.47□□□□□ -1.69
LSM2-210ENST00000470086 SMIM6P0DI80 62 aa4.47□□□□□ -1.69
LSM2-210ENST00000470086 FAM229BQ4G0N7 80 aa4.47□□□□□ -1.69
LSM2-210ENST00000470086 RPL7L1Q6DKI1 246 aaKnown RBP4.47□□□□□ -1.69
LSM2-210ENST00000470086 BAGE2Q86Y30 109 aa4.47□□□□□ -1.69
LSM2-210ENST00000470086 TMEM101Q96IK0 257 aa4.47□□□□□ -1.69
LSM2-210ENST00000470086 IMMP2LQ96T52 175 aa4.47□□□□□ -1.69
LSM2-210ENST00000470086 A0A1B0GV50 99 aa4.46□□□□□ -1.7
LSM2-210ENST00000470086 RPL37AP8A6NKH3 93 aa4.46□□□□□ -1.7
LSM2-210ENST00000470086 C1orf196B1AJZ1 125 aa4.46□□□□□ -1.7
LSM2-210ENST00000470086 TRGC1P0CF51 173 aa4.46□□□□□ -1.7
LSM2-210ENST00000470086 RPL28P46779 137 aaKnown RBP4.46□□□□□ -1.7
LSM2-210ENST00000470086 SERF2P84101 59 aa4.46□□□□□ -1.7
LSM2-210ENST00000470086 BATFQ16520 125 aa4.46□□□□□ -1.7
LSM2-210ENST00000470086 PCOTHQ58A44 107 aa4.46□□□□□ -1.7
LSM2-210ENST00000470086 AKR1C8PQ5T2L2 129 aa4.46□□□□□ -1.7
LSM2-210ENST00000470086 URB1-AS1Q96HZ7 61 aa4.46□□□□□ -1.7
LSM2-210ENST00000470086 XAGE1AQ9HD64 81 aa4.46□□□□□ -1.7
LSM2-210ENST00000470086 IGHV3OR16-9A0A0B4J2B5 98 aa4.45□□□□□ -1.7
LSM2-210ENST00000470086 NDUFC2-KCTD14E9PQ53 114 aa4.45□□□□□ -1.7
LSM2-210ENST00000470086 I3L3M4 83 aa4.45□□□□□ -1.7
LSM2-210ENST00000470086 SCO1O75880 301 aa4.45□□□□□ -1.7
LSM2-210ENST00000470086 PRLHP81277 87 aa4.45□□□□□ -1.7
LSM2-210ENST00000470086 Q5BKY6 102 aa4.45□□□□□ -1.7
LSM2-210ENST00000470086 DAND5Q8N907 189 aa4.45□□□□□ -1.7
LSM2-210ENST00000470086 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
LSM2-210ENST00000470086 TRBV20OR9-2A0A075B6H5 130 aa4.44□□□□□ -1.7
LSM2-210ENST00000470086 IGLV8-61A0A075B6I0 122 aa4.44□□□□□ -1.7
LSM2-210ENST00000470086 C7orf77A4D0Y5 90 aa4.44□□□□□ -1.7
LSM2-210ENST00000470086 S100A8P05109 93 aa4.44□□□□□ -1.7
LSM2-210ENST00000470086 RPL35P42766 123 aaKnown RBP4.44□□□□□ -1.7
LSM2-210ENST00000470086 CENPWQ5EE01 88 aa4.44□□□□□ -1.7
LSM2-210ENST00000470086 FAM218AQ96MZ4 157 aa4.44□□□□□ -1.7
LSM2-210ENST00000470086 CNFNQ9BYD5 112 aa4.44□□□□□ -1.7
LSM2-210ENST00000470086 NKX6-2Q9C056 277 aaPredicted RBP4.44□□□□□ -1.7
LSM2-210ENST00000470086 IGKV2D-26A0A0A0MRZ7 120 aa4.43□□□□□ -1.7
LSM2-210ENST00000470086 TRBV6-5A0A0K0K1A5 114 aa4.43□□□□□ -1.7
LSM2-210ENST00000470086 POLR2KP53803 58 aaKnown RBP4.43□□□□□ -1.7
LSM2-210ENST00000470086 TWIST1Q15672 202 aa4.43□□□□□ -1.7
LSM2-210ENST00000470086 LINC00167Q96N53 147 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms