RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 USP17L23D6RBM5 183 aa5.67□□□□□ -1.5
TPM3-215ENST00000469717 IGLV1-40P01703 118 aa5.67□□□□□ -1.5
TPM3-215ENST00000469717 DEFB131AP59861 70 aa5.67□□□□□ -1.5
TPM3-215ENST00000469717 FHL2Q14192 279 aa5.67□□□□□ -1.5
TPM3-215ENST00000469717 C4orf48Q5BLP8 95 aa5.67□□□□□ -1.5
TPM3-215ENST00000469717 MIR7-3HGQ8N6C7 128 aa5.67□□□□□ -1.5
TPM3-215ENST00000469717 SMIM11BQ8TCY0 68 aa5.67□□□□□ -1.5
TPM3-215ENST00000469717 IGLV5-45A0A087WSX0 123 aa5.66□□□□□ -1.5
TPM3-215ENST00000469717 LECT2O14960 151 aa5.66□□□□□ -1.5
TPM3-215ENST00000469717 INAFM2P0DMQ5 153 aa5.66□□□□□ -1.5
TPM3-215ENST00000469717 A0A0U1RQV1 116 aa5.65□□□□□ -1.5
TPM3-215ENST00000469717 CRPP02741 224 aa5.65□□□□□ -1.5
TPM3-215ENST00000469717 NTM-AS1Q6ZSK4 140 aa5.65□□□□□ -1.5
TPM3-215ENST00000469717 SERP2Q8N6R1 65 aa5.65□□□□□ -1.5
TPM3-215ENST00000469717 TRAV23DV6A0A075B6W5 121 aa5.65□□□□□ -1.51
TPM3-215ENST00000469717 IGHV4-31P0DP07 118 aa5.65□□□□□ -1.51
TPM3-215ENST00000469717 HTN3P15516 51 aa5.65□□□□□ -1.51
TPM3-215ENST00000469717 C11orf68Q9H3H3 251 aaKnown RBP5.65□□□□□ -1.51
TPM3-215ENST00000469717 FAM222AQ5U5X8 452 aa5.64□□□□□ -1.51
TPM3-215ENST00000469717 C18orf65Q6ZTR6 163 aa5.64□□□□□ -1.51
TPM3-215ENST00000469717 FAM19A1Q7Z5A9 133 aa5.64□□□□□ -1.51
TPM3-215ENST00000469717 SND1-IT1Q9HBX3 110 aa5.64□□□□□ -1.51
TPM3-215ENST00000469717 A6NDX4 124 aa5.64□□□□□ -1.51
TPM3-215ENST00000469717 RPL28P46779 137 aaKnown RBP5.64□□□□□ -1.51
TPM3-215ENST00000469717 K7EMT4 169 aa5.64□□□□□ -1.51
TPM3-215ENST00000469717 LY6G6DO95868 133 aa5.64□□□□□ -1.51
TPM3-215ENST00000469717 UBE2E2Q96LR5 201 aa5.63□□□□□ -1.51
TPM3-215ENST00000469717 PSMB8P28062 276 aa5.63□□□□□ -1.51
TPM3-215ENST00000469717 SS18Q15532 418 aa5.63□□□□□ -1.51
TPM3-215ENST00000469717 LINC00158P58513 81 aa5.63□□□□□ -1.51
TPM3-215ENST00000469717 RPL36AP83881 106 aaKnown RBP5.63□□□□□ -1.51
TPM3-215ENST00000469717 STHQ8IWL8 128 aa5.63□□□□□ -1.51
TPM3-215ENST00000469717 RPL36ALQ969Q0 106 aaKnown RBP5.63□□□□□ -1.51
TPM3-215ENST00000469717 C11orf72Q8NBR9 251 aa5.62□□□□□ -1.51
TPM3-215ENST00000469717 CCL18P55774 89 aa5.62□□□□□ -1.51
TPM3-215ENST00000469717 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
TPM3-215ENST00000469717 XCL2Q9UBD3 114 aa5.62□□□□□ -1.51
TPM3-215ENST00000469717 RNASE1P07998 156 aaKnown RBP5.62□□□□□ -1.51
TPM3-215ENST00000469717 SLURP1P55000 103 aa5.62□□□□□ -1.51
TPM3-215ENST00000469717 PRR3P79522 188 aaKnown RBP5.62□□□□□ -1.51
TPM3-215ENST00000469717 Q6JHZ5 121 aa5.62□□□□□ -1.51
TPM3-215ENST00000469717 C20orf197Q8N268 126 aa5.62□□□□□ -1.51
TPM3-215ENST00000469717 H3BUA1 57 aa5.61□□□□□ -1.51
TPM3-215ENST00000469717 LOC100131303A0A0U1RQF7 123 aa5.61□□□□□ -1.51
TPM3-215ENST00000469717 GHRHP01286 108 aa5.61□□□□□ -1.51
TPM3-215ENST00000469717 TRGV1A0A0A0MS02 117 aa5.61□□□□□ -1.51
TPM3-215ENST00000469717 DNAJC9-AS1A6NH13 148 aa5.61□□□□□ -1.51
TPM3-215ENST00000469717 PMAIP1Q13794 54 aa5.61□□□□□ -1.51
TPM3-215ENST00000469717 ENHOQ6UWT2 76 aa5.61□□□□□ -1.51
TPM3-215ENST00000469717 CDC42SE2Q9NRR3 84 aa5.6□□□□□ -1.51
TPM3-215ENST00000469717 TRAV13-2A0A0B4J235 113 aa5.6□□□□□ -1.51
TPM3-215ENST00000469717 CD164Q04900 197 aa5.6□□□□□ -1.51
TPM3-215ENST00000469717 PAX4O43316 350 aa5.6□□□□□ -1.51
TPM3-215ENST00000469717 Q6ZTI0 123 aa5.6□□□□□ -1.51
TPM3-215ENST00000469717 NSD1Q96L73 2696 aaPredicted RBP5.59□□□□□ -1.51
TPM3-215ENST00000469717 COX7B2Q8TF08 81 aa5.58□□□□□ -1.52
TPM3-215ENST00000469717 OBSCN-AS1Q96MR7 158 aa5.58□□□□□ -1.52
TPM3-215ENST00000469717 IGLV4-60A0A075B6I1 120 aa5.58□□□□□ -1.52
TPM3-215ENST00000469717 NDUFC2-KCTD14E9PQ53 114 aa5.58□□□□□ -1.52
TPM3-215ENST00000469717 HIVEP1P15822 2718 aa5.58□□□□□ -1.52
TPM3-215ENST00000469717 M0R2N4 97 aa5.58□□□□□ -1.52
TPM3-215ENST00000469717 TMEM243Q9BU79 118 aa5.58□□□□□ -1.52
TPM3-215ENST00000469717 COPS9Q8WXC6 57 aa5.57□□□□□ -1.52
TPM3-215ENST00000469717 ZNF469Q96JG9 3925 aaPredicted RBP5.57□□□□□ -1.52
TPM3-215ENST00000469717 SNURFQ9Y675 71 aa5.57□□□□□ -1.52
TPM3-215ENST00000469717 SERP1Q9Y6X1 66 aa5.57□□□□□ -1.52
TPM3-215ENST00000469717 CCL24O00175 119 aa5.57□□□□□ -1.52
TPM3-215ENST00000469717 SMIM26A0A096LP01 95 aa5.56□□□□□ -1.52
TPM3-215ENST00000469717 PRB2P02812 416 aaPredicted RBP5.56□□□□□ -1.52
TPM3-215ENST00000469717 SPATA3Q8NHX4 192 aa5.56□□□□□ -1.52
TPM3-215ENST00000469717 MAP6D1Q9H9H5 199 aa5.56□□□□□ -1.52
TPM3-215ENST00000469717 LINC00482Q8N8I6 264 aa5.56□□□□□ -1.52
TPM3-215ENST00000469717 A0A096LNT2 108 aa5.56□□□□□ -1.52
TPM3-215ENST00000469717 A8MTW9 85 aa5.56□□□□□ -1.52
TPM3-215ENST00000469717 CCKP06307 115 aa5.56□□□□□ -1.52
TPM3-215ENST00000469717 UBE2L6O14933 153 aa5.55□□□□□ -1.52
TPM3-215ENST00000469717 CLPSL2Q6UWE3 100 aa5.55□□□□□ -1.52
TPM3-215ENST00000469717 ORMDL1Q9P0S3 153 aa5.55□□□□□ -1.52
TPM3-215ENST00000469717 K7EQD1 137 aa5.55□□□□□ -1.52
TPM3-215ENST00000469717 XCL1P47992 114 aa5.55□□□□□ -1.52
TPM3-215ENST00000469717 C1orf158Q8N1D5 194 aa5.55□□□□□ -1.52
TPM3-215ENST00000469717 TRGV2A0A075B6R0 118 aa5.54□□□□□ -1.52
TPM3-215ENST00000469717 NOP10Q9NPE3 64 aaKnown RBP5.54□□□□□ -1.52
TPM3-215ENST00000469717 H0YGX0 51 aa5.54□□□□□ -1.52
TPM3-215ENST00000469717 DEFB130BP0DP73 79 aa5.54□□□□□ -1.52
TPM3-215ENST00000469717 DEFB130AP0DP74 79 aa5.54□□□□□ -1.52
TPM3-215ENST00000469717 FAM19A3Q7Z5A8 133 aa5.54□□□□□ -1.52
TPM3-215ENST00000469717 RMI2Q96E14 147 aa5.54□□□□□ -1.52
TPM3-215ENST00000469717 TRAV10A0A0B4J240 114 aa5.53□□□□□ -1.52
TPM3-215ENST00000469717 INSP01308 110 aa5.53□□□□□ -1.52
TPM3-215ENST00000469717 NANOS2P60321 138 aaKnown RBP5.53□□□□□ -1.52
TPM3-215ENST00000469717 MRPL55Q7Z7F7 128 aaKnown RBP5.53□□□□□ -1.52
TPM3-215ENST00000469717 CR1P17927 2039 aa5.53□□□□□ -1.52
TPM3-215ENST00000469717 H7BZZ5 65 aa5.53□□□□□ -1.52
TPM3-215ENST00000469717 IGHV3OR16-9A0A0B4J2B5 98 aa5.53□□□□□ -1.52
TPM3-215ENST00000469717 LYPD5Q6UWN5 251 aa5.52□□□□□ -1.53
TPM3-215ENST00000469717 LINC00474Q9P2X8 69 aa5.52□□□□□ -1.53
TPM3-215ENST00000469717 TRBV6-4A0A1B0GX49 114 aa5.52□□□□□ -1.53
TPM3-215ENST00000469717 DEFB4AO15263 64 aa5.52□□□□□ -1.53
TPM3-215ENST00000469717 Q6YL49 198 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms