RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 IGLV5-39A0A0G2JS06 123 aa14.86□□□□□ -0.03
SREBF1-208ENST00000469356 Q6ZRU5 148 aa14.86□□□□□ -0.03
SREBF1-208ENST00000469356 TRBV30A0A0K0K1B3 111 aa14.85□□□□□ -0.03
SREBF1-208ENST00000469356 SFTA2Q6UW10 78 aa14.85□□□□□ -0.03
SREBF1-208ENST00000469356 UNQ6190/PRO20217Q6UXQ8 127 aa14.83□□□□□ -0.04
SREBF1-208ENST00000469356 TMA7Q9Y2S6 64 aaKnown RBP14.82□□□□□ -0.04
SREBF1-208ENST00000469356 LOC107984640A0A0U1RRK4 108 aa14.81□□□□□ -0.04
SREBF1-208ENST00000469356 KRTAP10-1P60331 282 aa14.81□□□□□ -0.04
SREBF1-208ENST00000469356 LINC01620Q4KN68 170 aa14.81□□□□□ -0.04
SREBF1-208ENST00000469356 C2orf82Q6UX34 121 aa14.81□□□□□ -0.04
SREBF1-208ENST00000469356 DNAH5Q8TE73 4624 aa14.8□□□□□ -0.04
SREBF1-208ENST00000469356 SDIM1Q6ZPB5 146 aa14.8□□□□□ -0.04
SREBF1-208ENST00000469356 PLEKHB2Q96CS7 222 aa14.8□□□□□ -0.04
SREBF1-208ENST00000469356 C10orf25Q5T742 122 aa14.78□□□□□ -0.04
SREBF1-208ENST00000469356 LINC00474Q9P2X8 69 aa14.78□□□□□ -0.04
SREBF1-208ENST00000469356 C6orf48Q9UBA6 75 aa14.78□□□□□ -0.04
SREBF1-208ENST00000469356 LEPROTO15243 131 aa14.77□□□□□ -0.04
SREBF1-208ENST00000469356 PKHD1P08F94 4074 aa14.77□□□□□ -0.05
SREBF1-208ENST00000469356 TLX1NBP0CAT3 122 aa14.75□□□□□ -0.05
SREBF1-208ENST00000469356 DPH3Q96FX2 82 aa14.75□□□□□ -0.05
SREBF1-208ENST00000469356 EPPK1P58107 5090 aaKnown RBP14.75□□□□□ -0.05
SREBF1-208ENST00000469356 DYNC1H1Q14204 4646 aaKnown RBP14.74□□□□□ -0.05
SREBF1-208ENST00000469356 E9PLD3 99 aa14.73□□□□□ -0.05
SREBF1-208ENST00000469356 LGALS3P17931 250 aaKnown RBP14.73□□□□□ -0.05
SREBF1-208ENST00000469356 RPL18AQ02543 176 aaKnown RBP14.73□□□□□ -0.05
SREBF1-208ENST00000469356 MYMXA0A1B0GTQ4 84 aa14.72□□□□□ -0.05
SREBF1-208ENST00000469356 HERV-K104P63124 156 aa14.72□□□□□ -0.05
SREBF1-208ENST00000469356 LINC00587B1AMM8 73 aa14.71□□□□□ -0.05
SREBF1-208ENST00000469356 NDUFC2-KCTD14E9PQ53 114 aa14.71□□□□□ -0.05
SREBF1-208ENST00000469356 J3QQQ9 107 aa14.71□□□□□ -0.05
SREBF1-208ENST00000469356 SCGB1D1O95968 90 aa14.71□□□□□ -0.05
SREBF1-208ENST00000469356 NMUP48645 174 aa14.71□□□□□ -0.05
SREBF1-208ENST00000469356 GAGE2BQ13066 116 aa14.71□□□□□ -0.05
SREBF1-208ENST00000469356 Q6ZSA8 131 aa14.71□□□□□ -0.05
SREBF1-208ENST00000469356 CDK2AP2O75956 126 aa14.7□□□□□ -0.06
SREBF1-208ENST00000469356 NDUFA12Q9UI09 145 aa14.7□□□□□ -0.06
SREBF1-208ENST00000469356 IGKV2-24A0A0C4DH68 120 aa14.69□□□□□ -0.06
SREBF1-208ENST00000469356 HSBP1L1C9JCN9 74 aa14.69□□□□□ -0.06
SREBF1-208ENST00000469356 PTTG1IPP53801 180 aa14.69□□□□□ -0.06
SREBF1-208ENST00000469356 LRP1BQ9NZR2 4599 aa14.69□□□□□ -0.06
SREBF1-208ENST00000469356 A0A096LNI7 61 aa14.68□□□□□ -0.06
SREBF1-208ENST00000469356 COX17Q14061 63 aa14.68□□□□□ -0.06
SREBF1-208ENST00000469356 C9orf116Q5BN46 136 aaPredicted RBP14.68□□□□□ -0.06
SREBF1-208ENST00000469356 STPG4Q8N801 248 aa14.68□□□□□ -0.06
SREBF1-208ENST00000469356 ZNF625Q96I27 306 aaPredicted RBP14.68□□□□□ -0.06
SREBF1-208ENST00000469356 MAJINQ3KP22 176 aa14.67□□□□□ -0.06
SREBF1-208ENST00000469356 FAM30AQ9NZY2 134 aa14.67□□□□□ -0.06
SREBF1-208ENST00000469356 CIRBPQ14011 172 aaKnown RBP14.66□□□□□ -0.06
SREBF1-208ENST00000469356 ATOH7Q8N100 152 aa14.66□□□□□ -0.06
SREBF1-208ENST00000469356 ERG28Q9UKR5 140 aa14.66□□□□□ -0.06
SREBF1-208ENST00000469356 GAGE2EQ4V326 116 aa14.66□□□□□ -0.06
SREBF1-208ENST00000469356 Q6ZRP5 223 aa14.66□□□□□ -0.06
SREBF1-208ENST00000469356 SPACA4Q8TDM5 124 aa14.66□□□□□ -0.06
SREBF1-208ENST00000469356 GAGE2DQ9UEU5 116 aa14.66□□□□□ -0.06
SREBF1-208ENST00000469356 MEIG1Q5JSS6 88 aa14.65□□□□□ -0.06
SREBF1-208ENST00000469356 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.65□□□□□ -0.06
SREBF1-208ENST00000469356 CHTF8P0CG12 524 aa14.64□□□□□ -0.07
SREBF1-208ENST00000469356 PFN2P35080 140 aa14.63□□□□□ -0.07
SREBF1-208ENST00000469356 DNAH8Q96JB1 4490 aa14.62□□□□□ -0.07
SREBF1-208ENST00000469356 TSPEAR-AS2P59090 65 aa14.62□□□□□ -0.07
SREBF1-208ENST00000469356 LINC00158P58513 81 aa14.61□□□□□ -0.07
SREBF1-208ENST00000469356 SCXQ7RTU7 201 aa14.61□□□□□ -0.07
SREBF1-208ENST00000469356 BIRC6Q9NR09 4857 aa14.61□□□□□ -0.07
SREBF1-208ENST00000469356 A0A087WYN8 130 aa14.6□□□□□ -0.07
SREBF1-208ENST00000469356 XGP55808 180 aa14.6□□□□□ -0.07
SREBF1-208ENST00000469356 JOSD1Q15040 202 aaPredicted RBP14.6□□□□□ -0.07
SREBF1-208ENST00000469356 CIRBP-AS1Q8TBR5 109 aa14.6□□□□□ -0.07
SREBF1-208ENST00000469356 PANO1I0J062 215 aa14.58□□□□□ -0.08
SREBF1-208ENST00000469356 ANKRD39Q53RE8 183 aa14.58□□□□□ -0.08
SREBF1-208ENST00000469356 PLAC8Q9NZF1 115 aa14.58□□□□□ -0.08
SREBF1-208ENST00000469356 ZNF815PA8K554 130 aa14.57□□□□□ -0.08
SREBF1-208ENST00000469356 IGKV2D-26A0A0A0MRZ7 120 aa14.56□□□□□ -0.08
SREBF1-208ENST00000469356 SMIM13P0DJ93 91 aa14.55□□□□□ -0.08
SREBF1-208ENST00000469356 XAGE1AQ9HD64 81 aa14.54□□□□□ -0.08
SREBF1-208ENST00000469356 A0A0U1RRA0 63 aa14.53□□□□□ -0.08
SREBF1-208ENST00000469356 HAMPP81172 84 aa14.53□□□□□ -0.08
SREBF1-208ENST00000469356 A0A0J9YXY3 114 aa14.52□□□□□ -0.08
SREBF1-208ENST00000469356 C9orf129Q5T035 196 aaKnown RBP14.52□□□□□ -0.08
SREBF1-208ENST00000469356 SND1-IT1Q9HBX3 110 aa14.51□□□□□ -0.09
SREBF1-208ENST00000469356 SCGB1D4Q6XE38 83 aa14.5□□□□□ -0.09
SREBF1-208ENST00000469356 MIR7-3HGQ8N6C7 128 aa14.5□□□□□ -0.09
SREBF1-208ENST00000469356 VAMP8Q9BV40 100 aa14.5□□□□□ -0.09
SREBF1-208ENST00000469356 APOBP04114 4563 aaKnown RBP14.49□□□□□ -0.09
SREBF1-208ENST00000469356 A0A1W2PNN7 141 aa14.49□□□□□ -0.09
SREBF1-208ENST00000469356 TIMM17BO60830 172 aa14.49□□□□□ -0.09
SREBF1-208ENST00000469356 RPL24P83731 157 aaKnown RBP14.49□□□□□ -0.09
SREBF1-208ENST00000469356 C7orf33Q8WU49 177 aa14.49□□□□□ -0.09
SREBF1-208ENST00000469356 PLA2G2DQ9UNK4 145 aa14.49□□□□□ -0.09
SREBF1-208ENST00000469356 EPM2AB3EWF7 344 aa14.48□□□□□ -0.09
SREBF1-208ENST00000469356 FAM19A5Q7Z5A7 132 aaPredicted RBP14.48□□□□□ -0.09
SREBF1-208ENST00000469356 FAM229AH3BQW9 127 aa14.47□□□□□ -0.09
SREBF1-208ENST00000469356 MIEN1Q9BRT3 115 aa14.47□□□□□ -0.09
SREBF1-208ENST00000469356 TTTY13Q9BZ97 58 aa14.46□□□□□ -0.09
SREBF1-208ENST00000469356 SMR3BP02814 79 aaPredicted RBP14.45□□□□□ -0.1
SREBF1-208ENST00000469356 LBHQ53QV2 105 aaPredicted RBP14.45□□□□□ -0.1
SREBF1-208ENST00000469356 PYY3Q5JQD4 70 aa14.45□□□□□ -0.1
SREBF1-208ENST00000469356 PCP2Q8IVA1 136 aa14.45□□□□□ -0.1
SREBF1-208ENST00000469356 FAM168BA1KXE4 195 aa14.44□□□□□ -0.1
SREBF1-208ENST00000469356 TMEM238C9JI98 176 aa14.44□□□□□ -0.1
SREBF1-208ENST00000469356 SPATA45Q537H7 98 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms