RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 C1orf137Q5JT78 98 aa4.43□□□□□ -1.7
SNRPD3-205ENST00000468770 C2orf82Q6UX34 121 aa4.43□□□□□ -1.7
SNRPD3-205ENST00000468770 LINC00173Q6ZV60 143 aa4.43□□□□□ -1.7
SNRPD3-205ENST00000468770 LINC00469Q8N7U9 141 aa4.43□□□□□ -1.7
SNRPD3-205ENST00000468770 TOMM7Q9P0U1 55 aa4.43□□□□□ -1.7
SNRPD3-205ENST00000468770 PKHD1L1Q86WI1 4243 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 NDUFC2-KCTD14E9PQ53 114 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 HERVK_113P63121 156 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 C10orf91Q5T1B1 145 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 ERASQ7Z444 233 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 FAM19A3Q7Z5A8 133 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 TOMM6Q96B49 74 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 SCGB3A1Q96QR1 104 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 TIMM17AQ99595 171 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 ALKBH7Q9BT30 221 aaPredicted RBP4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 GNB1LQ9BYB4 327 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 GEMIN7Q9H840 131 aaKnown RBP4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
SNRPD3-205ENST00000468770 LINC01549A6NIU2 74 aa4.41□□□□□ -1.7
SNRPD3-205ENST00000468770 AKR1D1P51857 326 aa4.41□□□□□ -1.7
SNRPD3-205ENST00000468770 KRTAP10-8P60410 259 aa4.41□□□□□ -1.7
SNRPD3-205ENST00000468770 COX19Q49B96 90 aa4.41□□□□□ -1.7
SNRPD3-205ENST00000468770 Q8IZM0 81 aa4.41□□□□□ -1.7
SNRPD3-205ENST00000468770 CDKN2A-AS1Q9UH64 79 aa4.41□□□□□ -1.7
SNRPD3-205ENST00000468770 M0QXV9 152 aa4.4□□□□□ -1.71
SNRPD3-205ENST00000468770 IGLV7-43P04211 117 aa4.4□□□□□ -1.71
SNRPD3-205ENST00000468770 UBE2BP63146 152 aa4.4□□□□□ -1.71
SNRPD3-205ENST00000468770 S100A12P80511 92 aa4.4□□□□□ -1.71
SNRPD3-205ENST00000468770 FABP9Q0Z7S8 132 aa4.4□□□□□ -1.71
SNRPD3-205ENST00000468770 CBLN2Q8IUK8 224 aa4.4□□□□□ -1.71
SNRPD3-205ENST00000468770 LINC01546A6NGU7 62 aa4.39□□□□□ -1.71
SNRPD3-205ENST00000468770 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
SNRPD3-205ENST00000468770 FA2HQ7L5A8 372 aa4.39□□□□□ -1.71
SNRPD3-205ENST00000468770 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
SNRPD3-205ENST00000468770 DIRC1Q969H9 104 aa4.39□□□□□ -1.71
SNRPD3-205ENST00000468770 MRPL18Q9H0U6 180 aaKnown RBP4.39□□□□□ -1.71
SNRPD3-205ENST00000468770 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
SNRPD3-205ENST00000468770 TINCRA0A1B0GVN0 87 aa4.38□□□□□ -1.71
SNRPD3-205ENST00000468770 F8VRH5 84 aa4.38□□□□□ -1.71
SNRPD3-205ENST00000468770 CXCL5P42830 114 aa4.38□□□□□ -1.71
SNRPD3-205ENST00000468770 ODF1Q14990 250 aa4.38□□□□□ -1.71
SNRPD3-205ENST00000468770 PDZD11Q5EBL8 140 aa4.38□□□□□ -1.71
SNRPD3-205ENST00000468770 KRTAP11-1Q8IUC1 163 aa4.38□□□□□ -1.71
SNRPD3-205ENST00000468770 CST9LQ9H4G1 147 aa4.38□□□□□ -1.71
SNRPD3-205ENST00000468770 XAGE1AQ9HD64 81 aa4.38□□□□□ -1.71
SNRPD3-205ENST00000468770 SMIM1B2RUZ4 78 aa4.37□□□□□ -1.71
SNRPD3-205ENST00000468770 S100A2P29034 98 aa4.37□□□□□ -1.71
SNRPD3-205ENST00000468770 PMVKQ15126 192 aa4.37□□□□□ -1.71
SNRPD3-205ENST00000468770 LBHQ53QV2 105 aaPredicted RBP4.37□□□□□ -1.71
SNRPD3-205ENST00000468770 COX7B2Q8TF08 81 aa4.37□□□□□ -1.71
SNRPD3-205ENST00000468770 C22orf24Q9Y442 160 aa4.37□□□□□ -1.71
SNRPD3-205ENST00000468770 TRAPPC1Q9Y5R8 145 aa4.37□□□□□ -1.71
SNRPD3-205ENST00000468770 IGLV5-45A0A087WSX0 123 aa4.36□□□□□ -1.71
SNRPD3-205ENST00000468770 H0Y9J4 135 aa4.36□□□□□ -1.71
SNRPD3-205ENST00000468770 H3BRM9 83 aa4.36□□□□□ -1.71
SNRPD3-205ENST00000468770 SPINK8P0C7L1 97 aa4.36□□□□□ -1.71
SNRPD3-205ENST00000468770 NDUFA6P56556 154 aa4.36□□□□□ -1.71
SNRPD3-205ENST00000468770 TNXBP22105 4242 aa4.36□□□□□ -1.71
SNRPD3-205ENST00000468770 COLCA2A8K830 154 aa4.35□□□□□ -1.71
SNRPD3-205ENST00000468770 LINC00614P0C842 121 aa4.35□□□□□ -1.71
SNRPD3-205ENST00000468770 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
SNRPD3-205ENST00000468770 PCP4L1A6NKN8 68 aa4.34□□□□□ -1.71
SNRPD3-205ENST00000468770 NUPR1O60356 82 aa4.34□□□□□ -1.71
SNRPD3-205ENST00000468770 ZNF861PO60384 105 aa4.34□□□□□ -1.71
SNRPD3-205ENST00000468770 ATP5LO75964 103 aa4.34□□□□□ -1.71
SNRPD3-205ENST00000468770 HBDP02042 147 aa4.34□□□□□ -1.71
SNRPD3-205ENST00000468770 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.71
SNRPD3-205ENST00000468770 C18orf32Q8TCD1 76 aa4.34□□□□□ -1.71
SNRPD3-205ENST00000468770 TP73-AS1Q9UF72 201 aa4.34□□□□□ -1.71
SNRPD3-205ENST00000468770 IGLV1-50A0A075B6I6 118 aa4.33□□□□□ -1.72
SNRPD3-205ENST00000468770 SMIM6P0DI80 62 aa4.33□□□□□ -1.72
SNRPD3-205ENST00000468770 IGLC3P0DOY3 106 aa4.33□□□□□ -1.72
SNRPD3-205ENST00000468770 SNRPEP62304 92 aaKnown RBP4.33□□□□□ -1.72
SNRPD3-205ENST00000468770 PMCHL1Q16048 86 aa4.33□□□□□ -1.72
SNRPD3-205ENST00000468770 LINC00518Q8N0U6 118 aa4.33□□□□□ -1.72
SNRPD3-205ENST00000468770 URB1-AS1Q96HZ7 61 aa4.33□□□□□ -1.72
SNRPD3-205ENST00000468770 C12orf57Q99622 126 aa4.33□□□□□ -1.72
SNRPD3-205ENST00000468770 A0A096LNJ9 63 aa4.32□□□□□ -1.72
SNRPD3-205ENST00000468770 RPL37AP8A6NKH3 93 aa4.32□□□□□ -1.72
SNRPD3-205ENST00000468770 PFN2P35080 140 aa4.32□□□□□ -1.72
SNRPD3-205ENST00000468770 BAGE3Q86Y29 109 aa4.32□□□□□ -1.72
SNRPD3-205ENST00000468770 NKAPP1Q8N9T2 125 aa4.32□□□□□ -1.72
SNRPD3-205ENST00000468770 LINC00167Q96N53 147 aa4.32□□□□□ -1.72
SNRPD3-205ENST00000468770 IGLV5-39A0A0G2JS06 123 aa4.31□□□□□ -1.72
SNRPD3-205ENST00000468770 GAGE10A6NGK3 116 aa4.31□□□□□ -1.72
SNRPD3-205ENST00000468770 BCE1O60756 84 aa4.31□□□□□ -1.72
SNRPD3-205ENST00000468770 KRTAP1-4P0C5Y4 121 aa4.31□□□□□ -1.72
SNRPD3-205ENST00000468770 ZNF22P17026 224 aaPredicted RBP4.31□□□□□ -1.72
SNRPD3-205ENST00000468770 RPL13AP40429 203 aaKnown RBP4.31□□□□□ -1.72
SNRPD3-205ENST00000468770 RPL28P46779 137 aaKnown RBP4.31□□□□□ -1.72
SNRPD3-205ENST00000468770 TMEM170BQ5T4T1 132 aa4.31□□□□□ -1.72
SNRPD3-205ENST00000468770 LRP2P98164 4655 aa4.3□□□□□ -1.72
SNRPD3-205ENST00000468770 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
SNRPD3-205ENST00000468770 COX17Q14061 63 aa4.3□□□□□ -1.72
SNRPD3-205ENST00000468770 ZNF625Q96I27 306 aaPredicted RBP4.3□□□□□ -1.72
SNRPD3-205ENST00000468770 ERG28Q9UKR5 140 aa4.3□□□□□ -1.72
SNRPD3-205ENST00000468770 C5orf52A6NGY3 159 aa4.29□□□□□ -1.72
SNRPD3-205ENST00000468770 C11orf86A6NJI1 115 aa4.29□□□□□ -1.72
SNRPD3-205ENST00000468770 RPL24P83731 157 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms