RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 GAGE2EQ4V326 116 aa7.82□□□□□ -1.16
PTPN7-207ENST00000468385 UNQ6190/PRO20217Q6UXQ8 127 aa7.82□□□□□ -1.16
PTPN7-207ENST00000468385 TMEM136Q6ZRR5 245 aa7.82□□□□□ -1.16
PTPN7-207ENST00000468385 ATP5L2Q7Z4Y8 100 aa7.82□□□□□ -1.16
PTPN7-207ENST00000468385 TMEM18Q96B42 140 aa7.82□□□□□ -1.16
PTPN7-207ENST00000468385 GAGE2DQ9UEU5 116 aa7.82□□□□□ -1.16
PTPN7-207ENST00000468385 FAT4Q6V0I7 4981 aa7.82□□□□□ -1.16
PTPN7-207ENST00000468385 MUC17Q685J3 4493 aa7.81□□□□□ -1.16
PTPN7-207ENST00000468385 UBE2D1P51668 147 aa7.81□□□□□ -1.16
PTPN7-207ENST00000468385 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
PTPN7-207ENST00000468385 RIGQ13278 110 aa7.81□□□□□ -1.16
PTPN7-207ENST00000468385 A0A0U1RQV1 116 aa7.8□□□□□ -1.16
PTPN7-207ENST00000468385 M0QXV9 152 aa7.8□□□□□ -1.16
PTPN7-207ENST00000468385 RPL13AP40429 203 aaKnown RBP7.8□□□□□ -1.16
PTPN7-207ENST00000468385 UBE2BP63146 152 aa7.8□□□□□ -1.16
PTPN7-207ENST00000468385 MRPL51Q4U2R6 128 aaKnown RBP7.8□□□□□ -1.16
PTPN7-207ENST00000468385 COA6Q5JTJ3 125 aaKnown RBP7.8□□□□□ -1.16
PTPN7-207ENST00000468385 LINC00518Q8N0U6 118 aa7.8□□□□□ -1.16
PTPN7-207ENST00000468385 HIST3H2BBQ8N257 126 aa7.8□□□□□ -1.16
PTPN7-207ENST00000468385 HBBP68871 147 aa7.79□□□□□ -1.16
PTPN7-207ENST00000468385 KIAA0087Q14695 138 aa7.79□□□□□ -1.16
PTPN7-207ENST00000468385 PDZD11Q5EBL8 140 aa7.79□□□□□ -1.16
PTPN7-207ENST00000468385 FAM104BQ5XKR9 115 aa7.79□□□□□ -1.16
PTPN7-207ENST00000468385 BAGE3Q86Y29 109 aa7.79□□□□□ -1.16
PTPN7-207ENST00000468385 A0A1B0GW15 77 aa7.78□□□□□ -1.16
PTPN7-207ENST00000468385 FABP4P15090 132 aa7.78□□□□□ -1.16
PTPN7-207ENST00000468385 RPL32P62910 135 aaKnown RBP7.78□□□□□ -1.16
PTPN7-207ENST00000468385 MRPS36P82909 103 aaKnown RBP7.78□□□□□ -1.16
PTPN7-207ENST00000468385 KIAA1644Q3SXP7 199 aa7.78□□□□□ -1.16
PTPN7-207ENST00000468385 C20orf78Q9BR46 151 aa7.78□□□□□ -1.16
PTPN7-207ENST00000468385 SPANXA1Q9NS26 97 aa7.78□□□□□ -1.16
PTPN7-207ENST00000468385 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.17
PTPN7-207ENST00000468385 A0A1B0GXF2 115 aa7.76□□□□□ -1.17
PTPN7-207ENST00000468385 IFITM10A6NMD0 228 aa7.76□□□□□ -1.17
PTPN7-207ENST00000468385 TCAPO15273 167 aa7.76□□□□□ -1.17
PTPN7-207ENST00000468385 C12orf57Q99622 126 aa7.76□□□□□ -1.17
PTPN7-207ENST00000468385 TRBV30A0A0K0K1B3 111 aa7.75□□□□□ -1.17
PTPN7-207ENST00000468385 NDUFC2-KCTD14E9PQ53 114 aa7.75□□□□□ -1.17
PTPN7-207ENST00000468385 ZNF861PO60384 105 aa7.75□□□□□ -1.17
PTPN7-207ENST00000468385 TNFRSF6BO95407 300 aa7.75□□□□□ -1.17
PTPN7-207ENST00000468385 HIST1H2BLQ99880 126 aa7.75□□□□□ -1.17
PTPN7-207ENST00000468385 SMIM2Q9BVW6 85 aa7.75□□□□□ -1.17
PTPN7-207ENST00000468385 TSPAN13O95857 204 aa7.74□□□□□ -1.17
PTPN7-207ENST00000468385 SMIM6P0DI80 62 aa7.74□□□□□ -1.17
PTPN7-207ENST00000468385 CKS2P33552 79 aa7.74□□□□□ -1.17
PTPN7-207ENST00000468385 C2orf82Q6UX34 121 aa7.74□□□□□ -1.17
PTPN7-207ENST00000468385 PACRGQ96M98 296 aaPredicted RBP7.74□□□□□ -1.17
PTPN7-207ENST00000468385 LINC00242Q5T6M2 205 aa7.73□□□□□ -1.17
PTPN7-207ENST00000468385 ALKBH7Q9BT30 221 aaPredicted RBP7.73□□□□□ -1.17
PTPN7-207ENST00000468385 D6R8Y8 96 aa7.72□□□□□ -1.17
PTPN7-207ENST00000468385 NUPR1O60356 82 aa7.72□□□□□ -1.17
PTPN7-207ENST00000468385 SERF1AO75920 110 aa7.72□□□□□ -1.17
PTPN7-207ENST00000468385 A0A087X002 238 aa7.71□□□□□ -1.18
PTPN7-207ENST00000468385 NPYP01303 97 aa7.71□□□□□ -1.18
PTPN7-207ENST00000468385 C22orf24Q9Y442 160 aa7.71□□□□□ -1.18
PTPN7-207ENST00000468385 IGLV4-3A0A075B6K6 122 aa7.7□□□□□ -1.18
PTPN7-207ENST00000468385 IFI27P40305 119 aaPredicted RBP7.7□□□□□ -1.18
PTPN7-207ENST00000468385 C18orf32Q8TCD1 76 aa7.7□□□□□ -1.18
PTPN7-207ENST00000468385 PYGO1Q9Y3Y4 419 aa7.7□□□□□ -1.18
PTPN7-207ENST00000468385 JOSD1Q15040 202 aaPredicted RBP7.69□□□□□ -1.18
PTPN7-207ENST00000468385 PYY3Q5JQD4 70 aa7.69□□□□□ -1.18
PTPN7-207ENST00000468385 LINC01561Q8N1V8 128 aa7.69□□□□□ -1.18
PTPN7-207ENST00000468385 KRTAP9-6A0A140TA67 174 aa7.68□□□□□ -1.18
PTPN7-207ENST00000468385 PCP4L1A6NKN8 68 aa7.68□□□□□ -1.18
PTPN7-207ENST00000468385 HSBP1O75506 76 aa7.68□□□□□ -1.18
PTPN7-207ENST00000468385 LINC00469Q8N7U9 141 aa7.68□□□□□ -1.18
PTPN7-207ENST00000468385 SCGB1D1O95968 90 aa7.67□□□□□ -1.18
PTPN7-207ENST00000468385 LINC00614P0C842 121 aa7.67□□□□□ -1.18
PTPN7-207ENST00000468385 CHCHD1Q96BP2 118 aaKnown RBP7.67□□□□□ -1.18
PTPN7-207ENST00000468385 TMEM141Q96I45 108 aa7.67□□□□□ -1.18
PTPN7-207ENST00000468385 PPBPP02775 128 aa7.66□□□□□ -1.18
PTPN7-207ENST00000468385 LINC00310P59036 64 aa7.66□□□□□ -1.18
PTPN7-207ENST00000468385 S100A12P80511 92 aa7.66□□□□□ -1.18
PTPN7-207ENST00000468385 LBHQ53QV2 105 aaPredicted RBP7.66□□□□□ -1.18
PTPN7-207ENST00000468385 ZC2HC1BQ5TFG8 222 aa7.66□□□□□ -1.18
PTPN7-207ENST00000468385 TEX43Q6ZNM6 134 aa7.66□□□□□ -1.18
PTPN7-207ENST00000468385 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
PTPN7-207ENST00000468385 PRELID3AQ96N28 172 aa7.66□□□□□ -1.18
PTPN7-207ENST00000468385 XAGE1AQ9HD64 81 aa7.66□□□□□ -1.18
PTPN7-207ENST00000468385 BCE1O60756 84 aa7.65□□□□□ -1.18
PTPN7-207ENST00000468385 CRYGAP11844 174 aa7.65□□□□□ -1.18
PTPN7-207ENST00000468385 LINC00173Q6ZV60 143 aa7.65□□□□□ -1.18
PTPN7-207ENST00000468385 ORMDL3Q8N138 153 aa7.65□□□□□ -1.18
PTPN7-207ENST00000468385 FAM19A2Q8N3H0 131 aa7.65□□□□□ -1.18
PTPN7-207ENST00000468385 TOMM7Q9P0U1 55 aa7.65□□□□□ -1.18
PTPN7-207ENST00000468385 PRSS2P07478 247 aa7.64□□□□□ -1.19
PTPN7-207ENST00000468385 RPL28P46779 137 aaKnown RBP7.64□□□□□ -1.19
PTPN7-207ENST00000468385 CKS1BP61024 79 aa7.64□□□□□ -1.19
PTPN7-207ENST00000468385 Q6ZN92 141 aa7.64□□□□□ -1.19
PTPN7-207ENST00000468385 FA2HQ7L5A8 372 aa7.64□□□□□ -1.19
PTPN7-207ENST00000468385 MRPL55Q7Z7F7 128 aaKnown RBP7.64□□□□□ -1.19
PTPN7-207ENST00000468385 Q8IZM0 81 aa7.64□□□□□ -1.19
PTPN7-207ENST00000468385 C2orf88Q9BSF0 95 aa7.64□□□□□ -1.19
PTPN7-207ENST00000468385 TP73-AS1Q9UF72 201 aa7.64□□□□□ -1.19
PTPN7-207ENST00000468385 LOC389332A0A1B0GUA5 103 aa7.63□□□□□ -1.19
PTPN7-207ENST00000468385 KRTDAPP60985 99 aa7.63□□□□□ -1.19
PTPN7-207ENST00000468385 KRTAP13-2Q52LG2 175 aa7.63□□□□□ -1.19
PTPN7-207ENST00000468385 C6orf226Q5I0X4 101 aa7.63□□□□□ -1.19
PTPN7-207ENST00000468385 AMELXQ99217 191 aa7.63□□□□□ -1.19
PTPN7-207ENST00000468385 ANAPC11Q9NYG5 84 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms