RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 PRO1933Q9H354 126 aa-2.02□□□□□ -2.73
SMC4-207ENST00000467263 PKD1P98161 4303 aa-2.02□□□□□ -2.73
SMC4-207ENST00000467263 SPG11Q96JI7 2443 aa-2.02□□□□□ -2.73
SMC4-207ENST00000467263 TEP1Q99973 2627 aaKnown RBP-2.03□□□□□ -2.73
SMC4-207ENST00000467263 C1orf167Q5SNV9 1468 aa-2.03□□□□□ -2.73
SMC4-207ENST00000467263 REV3LO60673 3130 aa-2.04□□□□□ -2.74
SMC4-207ENST00000467263 DEFB112Q30KQ8 113 aa-2.04□□□□□ -2.74
SMC4-207ENST00000467263 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.04□□□□□ -2.74
SMC4-207ENST00000467263 MBD5Q9P267 1494 aa-2.04□□□□□ -2.74
SMC4-207ENST00000467263 AKAP9Q99996 3911 aa-2.05□□□□□ -2.74
SMC4-207ENST00000467263 H1FX-AS1Q4G0G2 97 aa-2.05□□□□□ -2.74
SMC4-207ENST00000467263 SCN7AQ01118 1682 aa-2.06□□□□□ -2.74
SMC4-207ENST00000467263 LOC100130705A0A1B0GUX0 176 aa-2.06□□□□□ -2.74
SMC4-207ENST00000467263 A0A0G2JMZ2 1700 aa-2.06□□□□□ -2.74
SMC4-207ENST00000467263 AKAP13Q12802 2813 aa-2.06□□□□□ -2.74
SMC4-207ENST00000467263 EHBP1L1Q8N3D4 1523 aa-2.07□□□□□ -2.74
SMC4-207ENST00000467263 XRN1Q8IZH2 1706 aaKnown RBP-2.07□□□□□ -2.74
SMC4-207ENST00000467263 OOSP1A8MZH6 123 aa-2.07□□□□□ -2.74
SMC4-207ENST00000467263 NAIPQ13075 1403 aa-2.08□□□□□ -2.74
SMC4-207ENST00000467263 SEC11AP67812 179 aa-2.08□□□□□ -2.74
SMC4-207ENST00000467263 SFTA2Q6UW10 78 aa-2.08□□□□□ -2.74
SMC4-207ENST00000467263 CRIPTQ9P021 101 aa-2.08□□□□□ -2.74
SMC4-207ENST00000467263 KNL1Q8NG31 2342 aa-2.09□□□□□ -2.74
SMC4-207ENST00000467263 A0A1B0GWA3 101 aa-2.09□□□□□ -2.74
SMC4-207ENST00000467263 C9orf62Q8N4C0 152 aa-2.09□□□□□ -2.74
SMC4-207ENST00000467263 TNRC18O15417 2968 aaPredicted RBP-2.09□□□□□ -2.74
SMC4-207ENST00000467263 FGF7P21781 194 aa-2.1□□□□□ -2.75
SMC4-207ENST00000467263 GNG11P61952 73 aa-2.1□□□□□ -2.75
SMC4-207ENST00000467263 MANBALQ9NQG1 85 aa-2.1□□□□□ -2.75
SMC4-207ENST00000467263 ADGRL2O95490 1459 aa-2.11□□□□□ -2.75
SMC4-207ENST00000467263 UBE2L5PA0A1B0GUS4 154 aa-2.11□□□□□ -2.75
SMC4-207ENST00000467263 UBE2L3P68036 154 aaKnown RBP-2.11□□□□□ -2.75
SMC4-207ENST00000467263 MARF1Q9Y4F3 1742 aaKnown RBP-2.11□□□□□ -2.75
SMC4-207ENST00000467263 QRICH2Q9H0J4 1663 aa-2.12□□□□□ -2.75
SMC4-207ENST00000467263 LYSTQ99698 3801 aa-2.12□□□□□ -2.75
SMC4-207ENST00000467263 NLRP1Q9C000 1473 aa-2.12□□□□□ -2.75
SMC4-207ENST00000467263 TRANK1O15050 2925 aa-2.12□□□□□ -2.75
SMC4-207ENST00000467263 FAM223BA6NKX1 122 aa-2.12□□□□□ -2.75
SMC4-207ENST00000467263 NUP188Q5SRE5 1749 aa-2.12□□□□□ -2.75
SMC4-207ENST00000467263 PLEKHH2Q8IVE3 1493 aa-2.13□□□□□ -2.75
SMC4-207ENST00000467263 Q0VG73 95 aa-2.13□□□□□ -2.75
SMC4-207ENST00000467263 CCDC58Q4VC31 144 aa-2.13□□□□□ -2.75
SMC4-207ENST00000467263 C9orf153Q5TBE3 101 aa-2.13□□□□□ -2.75
SMC4-207ENST00000467263 PKHD1L1Q86WI1 4243 aa-2.13□□□□□ -2.75
SMC4-207ENST00000467263 KTN1Q86UP2 1357 aaKnown RBP-2.13□□□□□ -2.75
SMC4-207ENST00000467263 DNAH3Q8TD57 4116 aa-2.13□□□□□ -2.75
SMC4-207ENST00000467263 NKTRP30414 1462 aaKnown RBP-2.14□□□□□ -2.75
SMC4-207ENST00000467263 TRAPPC2P0DI81 140 aa-2.14□□□□□ -2.75
SMC4-207ENST00000467263 TRAPPC2BP0DI82 140 aa-2.14□□□□□ -2.75
SMC4-207ENST00000467263 CCDC141Q6ZP82 1450 aa-2.14□□□□□ -2.75
SMC4-207ENST00000467263 NIPBLQ6KC79 2804 aaeCLIP-2.15□□□□□ -2.75
SMC4-207ENST00000467263 NDUFA2O43678 99 aa-2.15□□□□□ -2.75
SMC4-207ENST00000467263 SPRR2FQ96RM1 72 aa-2.15□□□□□ -2.75
SMC4-207ENST00000467263 A0A1B0GU69 56 aa-2.16□□□□□ -2.76
SMC4-207ENST00000467263 I3L3M4 83 aa-2.16□□□□□ -2.76
SMC4-207ENST00000467263 AKAIN1P0CW23 69 aa-2.16□□□□□ -2.76
SMC4-207ENST00000467263 DPH3P1Q9H4G8 78 aa-2.16□□□□□ -2.76
SMC4-207ENST00000467263 UNC13AQ9UPW8 1703 aa-2.17□□□□□ -2.76
SMC4-207ENST00000467263 F6UZH7 168 aa-2.17□□□□□ -2.76
SMC4-207ENST00000467263 COX6CP09669 75 aa-2.17□□□□□ -2.76
SMC4-207ENST00000467263 UBE2D3P61077 147 aa-2.17□□□□□ -2.76
SMC4-207ENST00000467263 UBE2D2P62837 147 aa-2.17□□□□□ -2.76
SMC4-207ENST00000467263 FAT3Q8TDW7 4589 aa-2.17□□□□□ -2.76
SMC4-207ENST00000467263 DSPP15924 2871 aaKnown RBP-2.17□□□□□ -2.76
SMC4-207ENST00000467263 USP9XQ93008 2570 aaPredicted RBP-2.17□□□□□ -2.76
SMC4-207ENST00000467263 VPS13DQ5THJ4 4388 aa-2.18□□□□□ -2.76
SMC4-207ENST00000467263 ZZEF1O43149 2961 aa-2.18□□□□□ -2.76
SMC4-207ENST00000467263 PDCD11Q14690 1871 aaKnown RBP-2.18□□□□□ -2.76
SMC4-207ENST00000467263 ATP5EP56381 51 aaPredicted RBP-2.19□□□□□ -2.76
SMC4-207ENST00000467263 C12orf57Q99622 126 aa-2.19□□□□□ -2.76
SMC4-207ENST00000467263 PRO1854Q9UHT4 67 aa-2.19□□□□□ -2.76
SMC4-207ENST00000467263 SCAPERQ9BY12 1400 aa-2.19□□□□□ -2.76
SMC4-207ENST00000467263 DIP2CQ9Y2E4 1556 aa-2.19□□□□□ -2.76
SMC4-207ENST00000467263 A2ML1A8K2U0 1454 aa-2.2□□□□□ -2.76
SMC4-207ENST00000467263 TOP2BQ02880 1626 aa-2.2□□□□□ -2.76
SMC4-207ENST00000467263 PP6455Q8WZ26 134 aa-2.2□□□□□ -2.76
SMC4-207ENST00000467263 LINC00846Q9NV44 126 aa-2.2□□□□□ -2.76
SMC4-207ENST00000467263 FAM24AA6NFZ4 105 aa-2.21□□□□□ -2.76
SMC4-207ENST00000467263 SAA2P0DJI9 122 aaPredicted RBP-2.21□□□□□ -2.76
SMC4-207ENST00000467263 DNAH2Q9P225 4427 aa-2.21□□□□□ -2.76
SMC4-207ENST00000467263 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.22□□□□□ -2.761e-8■■■■■ 36.7
SMC4-207ENST00000467263 LAMA1P25391 3075 aa-2.22□□□□□ -2.76
SMC4-207ENST00000467263 PLECQ15149 4684 aaKnown RBP-2.23□□□□□ -2.77
SMC4-207ENST00000467263 A0A087WVE0 104 aa-2.23□□□□□ -2.77
SMC4-207ENST00000467263 TSC22D3Q99576 134 aa-2.23□□□□□ -2.77
SMC4-207ENST00000467263 CUBNO60494 3623 aa-2.23□□□□□ -2.77
SMC4-207ENST00000467263 CUL7Q14999 1698 aa-2.24□□□□□ -2.77
SMC4-207ENST00000467263 DMXL1Q9Y485 3027 aa-2.24□□□□□ -2.77
SMC4-207ENST00000467263 C6orf201Q7Z4U5 140 aa-2.24□□□□□ -2.77
SMC4-207ENST00000467263 DNHD1Q96M86 4753 aa-2.24□□□□□ -2.77
SMC4-207ENST00000467263 ANKRD36A6QL64 1941 aa-2.25□□□□□ -2.77
SMC4-207ENST00000467263 MRC2Q9UBG0 1479 aa-2.25□□□□□ -2.77
SMC4-207ENST00000467263 NAP1L6A6NFF2 107 aa-2.25□□□□□ -2.77
SMC4-207ENST00000467263 K7EP13 123 aa-2.25□□□□□ -2.77
SMC4-207ENST00000467263 SNCAP37840 140 aa-2.25□□□□□ -2.77
SMC4-207ENST00000467263 LAMA3Q16787 3333 aa-2.25□□□□□ -2.77
SMC4-207ENST00000467263 DNAH9Q9NYC9 4486 aa-2.26□□□□□ -2.77
SMC4-207ENST00000467263 SLIT1O75093 1534 aa-2.26□□□□□ -2.77
SMC4-207ENST00000467263 ADAMTS12P58397 1594 aa-2.26□□□□□ -2.77
SMC4-207ENST00000467263 H0YGG7 62 aa-2.26□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms